Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
7K00_G
|
7K00_A
|
7O7Y_Ae
|
7O7Y_A2
|
Conserved?
|
---|---|---|---|---|
G:33 [ASP] | A:1350 [A] | Ae:83 [ASN] | A2:1652 [A] | ✔ |
G:33 [ASP] | A:1351 [U] | Ae:83 [ASN] | A2:1653 [G] | ✔ |
G:33 [ASP] | A:1372 [U] | Ae:83 [ASN] | A2:1674 [U] | ✔ |
G:116 [MET] | A:1240 [U] | Ae:169 [ILE] | A2:1536 [U] | ✔ |
G:115 [SER] | A:1240 [U] | Ae:168 [THR] | A2:1536 [U] | ✔ |
G:36 [LYS] | A:1372 [U] | Ae:86 [LYS] | A2:1674 [U] | ✔ |
G:36 [LYS] | A:1373 [G] | Ae:86 [LYS] | A2:1675 [G] | ✔ |
G:36 [LYS] | A:1374 [A] | Ae:86 [LYS] | A2:1676 [A] | ✔ |
G:39 [ALA] | A:1240 [U] | Ae:89 [THR] | A2:1536 [U] | ✔ |
G:35 [LYS] | A:1241 [G] | Ae:85 [LYS] | A2:1537 [G] | ✔ |
G:35 [LYS] | A:1289 [A] | Ae:85 [LYS] | A2:1591 [C] | ✔ |
G:35 [LYS] | A:1290 [G] | Ae:85 [LYS] | A2:1592 [C] | ✔ |
G:35 [LYS] | A:1351 [U] | Ae:85 [LYS] | A2:1653 [G] | ✔ |
G:35 [LYS] | A:1372 [U] | Ae:85 [LYS] | A2:1674 [U] | ✔ |
G:42 [ILE] | A:1240 [U] | Ae:92 [ILE] | A2:1536 [U] | ✔ |
G:109 [ARG] | A:1240 [U] | Ae:159 [ARG] | A2:1536 [U] | ✔ |
G:98 [ALA] | A:1376 [U] | Ae:148 [ASN] | A2:1678 [U] | ✔ |
G:28 [ASN] | A:1374 [A] | Ae:74 [ASN] | A2:1676 [A] | ✔ |
G:28 [ASN] | A:1375 [A] | Ae:74 [ASN] | A2:1677 [U] | ✔ |
G:32 [VAL] | A:1240 [U] | Ae:82 [ASN] | A2:1536 [U] | ✔ |
G:102 [ARG] | A:939 [G] | Ae:152 [TRP] | A2:1222 [G] | ✔ |
G:102 [ARG] | A:940 [C] | Ae:152 [TRP] | A2:1223 [G] | ✔ |
G:102 [ARG] | A:1375 [A] | Ae:152 [TRP] | A2:1677 [U] | ✔ |
G:114 [LYS] | A:1239 [A] | Ae:167 [LYS] | A2:1535 [C] | ✔ |
G:114 [LYS] | A:1240 [U] | Ae:167 [LYS] | A2:1536 [U] | ✔ |
G:105 [VAL] | A:1240 [U] | Ae:155 [CYS] | A2:1536 [U] | ✔ |
G:7 [ILE] | A:1378 [C] | Ae:58 [ALA] | A2:1680 [A] | ✔ |
G:38 [THR] | A:1240 [U] | Ae:88 [MET] | A2:1536 [U] | ✔ |
G:38 [THR] | A:1241 [G] | Ae:88 [MET] | A2:1537 [G] | ✔ |
G:38 [THR] | A:1290 [G] | Ae:88 [MET] | A2:1592 [C] | ✔ |
G:38 [THR] | A:1291 [U] | Ae:88 [MET] | A2:1593 [C] | ✔ |
G:25 [LYS] | A:1376 [U] | Ae:71 [ARG] | A2:1678 [U] | ✔ |
G:30 [LEU] | A:1240 [U] | Ae:76 [MET] | A2:1536 [U] | ✔ |
G:34 [GLY] | A:1349 [A] | Ae:84 [GLY] | A2:1651 [A] | ✔ |
G:34 [GLY] | A:1350 [A] | Ae:84 [GLY] | A2:1652 [A] | ✔ |
G:34 [GLY] | A:1372 [U] | Ae:84 [GLY] | A2:1674 [U] | ✔ |
G:34 [GLY] | A:1373 [G] | Ae:84 [GLY] | A2:1675 [G] | ✔ |
G:29 [ILE] | A:1374 [A] | Ae:75 [SER] | A2:1676 [A] | ✔ |
G:29 [ILE] | A:1375 [A] | Ae:75 [SER] | A2:1677 [U] | ✔ |
G:31 [MET] | A:1373 [G] | Ae:77 [MET] | A2:1675 [G] | ✔ |
G:31 [MET] | A:1374 [A] | Ae:77 [MET] | A2:1676 [A] | ✔ |
G:37 [SER] | A:1290 [G] | Ae:87 [LEU] | A2:1592 [C] | ✔ |
G:37 [SER] | A:1291 [U] | Ae:87 [LEU] | A2:1593 [C] | ✔ |
G:95 [ARG] | A:938 [A] | Ae:145 [ARG] | A2:1221 [A] | ✔ |
G:95 [ARG] | A:939 [G] | Ae:145 [ARG] | A2:1222 [G] | ✔ |
G:95 [ARG] | A:1377 [A] | Ae:145 [ARG] | A2:1679 [A2M] | ✔ |
G:116 [MET] | A:1239 [A] | Ae:169 [ILE] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
G:115 [SER] | A:1239 [A] | Ae:168 [THR] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
G:115 [SER] | A:1297 [G] | Ae:168 [THR] | A2:1599 [G] | ❌ 7O7Y_Ae_A2 |
G:115 [SER] | A:1298 [U] | Ae:168 [THR] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
G:35 [LYS] | A:1240 [U] | Ae:85 [LYS] | A2:1536 [U] | ❌ 7O7Y_Ae_A2 |
G:109 [ARG] | A:941 [G] | Ae:159 [ARG] | A2:1224 [A] | ❌ 7O7Y_Ae_A2 |
G:102 [ARG] | A:938 [A] | Ae:152 [TRP] | A2:1221 [A] | ❌ 7O7Y_Ae_A2 |
G:102 [ARG] | A:1376 [U] | Ae:152 [TRP] | A2:1678 [U] | ❌ 7O7Y_Ae_A2 |
G:114 [LYS] | A:1297 [G] | Ae:167 [LYS] | A2:1599 [G] | ❌ 7O7Y_Ae_A2 |
G:114 [LYS] | A:1298 [U] | Ae:167 [LYS] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
G:12 [ILE] | A:1374 [A] | Ae:63 [LYS] | A2:1676 [A] | ❌ 7O7Y_Ae_A2 |
G:12 [ILE] | A:1375 [A] | Ae:63 [LYS] | A2:1677 [U] | ❌ 7O7Y_Ae_A2 |
G:7 [ILE] | A:1377 [A] | Ae:58 [ALA] | A2:1679 [A2M] | ❌ 7O7Y_Ae_A2 |
G:25 [LYS] | A:1375 [A] | Ae:71 [ARG] | A2:1677 [U] | ❌ 7O7Y_Ae_A2 |
G:29 [ILE] | A:1376 [U] | Ae:75 [SER] | A2:1678 [U] | ❌ 7O7Y_Ae_A2 |
G:31 [MET] | A:1240 [U] | Ae:77 [MET] | A2:1536 [U] | ❌ 7O7Y_Ae_A2 |
G:77 [SER] | A:937 [A] | Ae:127 [ARG] | A2:1220 [C] | ❌ 7K00_G_A |
G:77 [SER] | A:938 [A] | Ae:127 [ARG] | A2:1221 [A] | ❌ 7K00_G_A |
G:95 [ARG] | A:1376 [U] | Ae:145 [ARG] | A2:1678 [U] | ❌ 7K00_G_A |
G:98 [ALA] | A:1377 [A] | Ae:148 [ASN] | A2:1679 [A2M] | ❌ 7K00_G_A |
G:7 [ILE] | A:1346 [A] | Ae:58 [ALA] | A2:1648 [A] | ❌ 7K00_G_A |
G:12 [ILE] | A:1377 [A] | Ae:63 [LYS] | A2:1679 [A2M] | ❌ 7K00_G_A |
G:12 [ILE] | A:1376 [U] | Ae:63 [LYS] | A2:1678 [U] | ❌ 7K00_G_A |
G:28 [ASN] | A:1373 [G] | Ae:74 [ASN] | A2:1675 [G] | ❌ 7K00_G_A |
G:32 [VAL] | A:1241 [G] | Ae:82 [ASN] | A2:1537 [G] | ❌ 7K00_G_A |
G:33 [ASP] | A:941 [G] | Ae:83 [ASN] | A2:1224 [A] | ❌ 7K00_G_A |
G:33 [ASP] | A:940 [C] | Ae:83 [ASN] | A2:1223 [G] | ❌ 7K00_G_A |
G:33 [ASP] | A:1349 [A] | Ae:83 [ASN] | A2:1651 [A] | ❌ 7K00_G_A |
G:37 [SER] | A:1373 [G] | Ae:87 [LEU] | A2:1675 [G] | ❌ 7K00_G_A |
G:78 [ARG] | A:1381 [U] | Ae:128 [ILE] | A2:1683 [C] | ❌ 7O7Y_Ae:128, 7O7Y_A2:1683 no longer at interface |
G:81 [GLY] | A:693 [G] | Ae:131 [ALA] | A2:962 [G] | ❌ 7O7Y_Ae:131, 7O7Y_A2:962 no longer at interface |
G:79 [ARG] | A:1381 [U] | Ae:129 [GLY] | A2:1683 [C] | ❌ 7O7Y_Ae:129, 7O7Y_A2:1683 no longer at interface |
G:79 [ARG] | A:1383 [C] | Ae:129 [GLY] | A2:1685 [C] | ❌ 7O7Y_Ae:129, 7O7Y_A2:1685 no longer at interface |
G:77 [SER] | A:1381 [U] | Ae:127 [ARG] | A2:1683 [C] | ❌ 7O7Y_A2:1683 no longer at interface |
G:83 [SER] | A:693 [G] | Ae:133 [THR] | A2:962 [G] | ❌ 7O7Y_Ae:133, 7O7Y_A2:962 no longer at interface |
G:8 [GLY] | A:1175 [G] | Ae:59 [LYS] | A2:1471 [C] | ❌ 7K00_G:8, 7K00_A:1175 no longer at interface |
G:8 [GLY] | A:1174 [G] | Ae:59 [LYS] | A2:1470 [A] | ❌ 7K00_G:8, 7K00_A:1174 no longer at interface |
G:41 [SER] | A:1292 [G] | Ae:91 [ARG] | A2:1594 [C] | ❌ 7K00_G:41, 7K00_A:1292 no longer at interface |
G:78 [ARG] | A:1379 [G] | Ae:128 [ILE] | A2:1681 [G] | ❌ 7O7Y_Ae:128 no longer at interface |
G:10 [ARG] | A:1346 [A] | Ae:61 [PHE] | A2:1648 [A] | ❌ 7O7Y_Ae:61 no longer at interface |
G:10 [ARG] | A:1375 [A] | Ae:61 [PHE] | A2:1677 [U] | ❌ 7O7Y_Ae:61 no longer at interface |
G:10 [ARG] | A:1376 [U] | Ae:61 [PHE] | A2:1678 [U] | ❌ 7O7Y_Ae:61 no longer at interface |
G:10 [ARG] | A:1377 [A] | Ae:61 [PHE] | A2:1679 [A2M] | ❌ 7O7Y_Ae:61 no longer at interface |
G:79 [ARG] | A:1382 [C] | Ae:129 [GLY] | A2:1684 [C] | ❌ 7O7Y_Ae:129 no longer at interface |
G:99 [LEU] | A:939 [G] | Ae:149 [GLN] | A2:1222 [G] | ❌ 7O7Y_Ae:149 no longer at interface |
G:106 [GLU] | A:940 [C] | Ae:156 [THR] | A2:1223 [G] | ❌ 7O7Y_Ae:156 no longer at interface |
G:119 [ARG] | A:1239 [A] | Ae:172 [CYS] | A2:1535 [C] | ❌ 7O7Y_Ae:172 no longer at interface |
G:119 [ARG] | A:1240 [U] | Ae:172 [CYS] | A2:1536 [U] | ❌ 7O7Y_Ae:172 no longer at interface |
G:76 [LYS] | A:1378 [C] | Ae:126 [THR] | A2:1680 [A] | ❌ 7O7Y_Ae:126 no longer at interface |
G:117 [ALA] | A:1240 [U] | Ae:170 [ALA] | A2:1536 [U] | ❌ 7O7Y_Ae:170 no longer at interface |
G:92 [ARG] | A:1377 [A] | Ae:142 [SER] | A2:1679 [A2M] | ❌ 7O7Y_Ae:142 no longer at interface |
G:92 [ARG] | A:1378 [C] | Ae:142 [SER] | A2:1680 [A] | ❌ 7O7Y_Ae:142 no longer at interface |
G:80 [VAL] | A:1382 [C] | Ae:130 [ARG] | A2:1684 [C] | ❌ 7K00_G:80 no longer at interface |
G:112 [GLY] | A:1240 [U] | Ae:162 [ALA] | A2:1536 [U] | ❌ 7K00_G:112 no longer at interface |
G:112 [GLY] | A:1239 [A] | Ae:162 [ALA] | A2:1535 [C] | ❌ 7K00_G:112 no longer at interface |
G:113 [ASP] | A:1298 [U] | Ae:165 [ASN] | A2:1600 [U] | ❌ 7K00_G:113 no longer at interface |
G:113 [ASP] | A:1239 [A] | Ae:165 [ASN] | A2:1535 [C] | ❌ 7K00_G:113 no longer at interface |
G:8 [GLY] | A:1378 [C] | Ae:59 [LYS] | A2:1680 [A] | ❌ 7K00_G:8 no longer at interface |
G:9 [GLN] | A:1378 [C] | Ae:60 [ARG] | A2:1680 [A] | ❌ 7K00_G:9 no longer at interface |
G:9 [GLN] | A:1379 [G] | Ae:60 [ARG] | A2:1681 [G] | ❌ 7K00_G:9 no longer at interface |
G:24 [ALA] | A:1374 [A] | Ae:70 [GLU] | A2:1676 [A] | ❌ 7K00_G:24 no longer at interface |
G:41 [SER] | A:1240 [U] | Ae:91 [ARG] | A2:1536 [U] | ❌ 7K00_G:41 no longer at interface |
G:41 [SER] | A:1241 [G] | Ae:91 [ARG] | A2:1537 [G] | ❌ 7K00_G:41 no longer at interface |
G:41 [SER] | A:1291 [U] | Ae:91 [ARG] | A2:1593 [C] | ❌ 7K00_G:41 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein S7 | 0.91 | 2.33 | 0.23 | 0.81 | 0.92 | 0.62 | 0.72 | 0.46 | 0.42 | 0.27 | 0.55 |
Other pairs involving 7K00_G_A or 7O7Y_Ae_A2
Total number of entries: 9
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
4Y4O_1g_1a | 7K00_G_A | 0.78 | 0.98 | 1.18 | 0.45 | Ribosomal protein S7 | Bacterial small subunit ribosomal RNA | compare |
6S0X_g_a | 7K00_G_A | 0.64 | 0.95 | 3.32 | 0.41 | Ribosomal protein S7 | Bacterial small subunit ribosomal RNA | compare |
4YBB_AG_AA | 7K00_G_A | 0.76 | 0.97 | 4.0 | 0.6 | Ribosomal protein S7 | Bacterial small subunit ribosomal RNA | compare |
4W2F_AG_AA | 7K00_G_A | 0.83 | 0.98 | 1.2 | 0.47 | Ribosomal protein S7 | Bacterial small subunit ribosomal RNA | compare |
4Y4O_1g_1a | 7O7Y_Ae_A2 | 0.45 | 0.93 | 2.9 | 0.21 | Ribosomal protein S7 | compare | |
7K00_G_A | 7O7Y_Ae_A2 | 0.46 | 0.91 | 2.33 | 0.23 | Ribosomal protein S7 | compare | |
6S0X_g_a | 7O7Y_Ae_A2 | 0.53 | 0.9 | 3.5 | 0.26 | Ribosomal protein S7 | compare | |
4YBB_AG_AA | 7O7Y_Ae_A2 | 0.47 | 0.9 | 4.12 | 0.19 | Ribosomal protein S7 | compare | |
4W2F_AG_AA | 7O7Y_Ae_A2 | 0.48 | 0.93 | 1.93 | 0.19 | Ribosomal protein S7 | compare |