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All interfaces > All interologs > Interface groups > group112 > 7O7Y_Ae_A2

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Licorice
Surface

RNA

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_Ae
7O7Y_A2
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Ae:51 [HIS] A2:1675 [G] 2.58 A2:1651 [A] 83.42
Ae:53 [ALA] A2:1649 [G] 3.85 32.7
Ae:55 [ARG] A2:1648 [A] 4.91 A2:1678 [U] 76.18
Ae:55 [ARG] A2:1649 [G] 2.83 76.18
Ae:57 [ALA] A2:1648 [A] 3.57 A2:1678 [U] 51.9
Ae:57 [ALA] A2:1677 [U] 4.45 51.9
Ae:57 [ALA] A2:1678 [U] 3.89 A2:1648 [A] 51.9
Ae:57 [ALA] A2:1679 [A2M] 3.12 base:BB 51.9
Ae:57 [ALA] A2:1680 [A] 2.8 base:BB 51.9
Ae:58 [ALA] A2:1648 [A] 4.75 A2:1678 [U] 43.26
Ae:58 [ALA] A2:1680 [A] 3.84 43.26
Ae:59 [LYS] A2:1470 [A] 3.92 A2:1458 [U] 42.75
Ae:59 [LYS] A2:1471 [C] 3.15 A2:1457 [G] 42.75
Ae:59 [LYS] A2:1680 [A] 4.1 42.75
Ae:60 [ARG] A2:1680 [A] 3.05 49.99
Ae:60 [ARG] A2:1681 [G] 3.62 A2:1219 [C] 49.99
Ae:63 [LYS] A2:1678 [U] 3.1 A2:1648 [A] 87.16
Ae:63 [LYS] A2:1679 [A2M] 2.53 87.16
Ae:70 [GLU] A2:1676 [A] 4.55 A2:1650 [U] 98.38
Ae:71 [ARG] A2:1678 [U] 3.28 A2:1648 [A] 98.01
Ae:74 [ASN] A2:1675 [G] 4.71 A2:1651 [A] 89.07
Ae:74 [ASN] A2:1676 [A] 3.18 A2:1650 [U] 89.07
Ae:74 [ASN] A2:1677 [U] 3.17 89.07
Ae:75 [SER] A2:1676 [A] 4.72 A2:1650 [U] 54.51
Ae:75 [SER] A2:1677 [U] 4.19 54.51
Ae:76 [MET] A2:1536 [U] 3.04 base:BB 70.43
Ae:77 [MET] A2:1675 [G] 3.79 A2:1651 [A] 82.03
Ae:77 [MET] A2:1676 [A] 3.23 A2:1650 [U] 82.03
Ae:78 [MET] A2:1223 [G] 3.74 A2:1645 [C] 68.07
Ae:78 [MET] A2:1224 [A] 3.84 A2:1644 [PSU] 68.07
Ae:78 [MET] A2:1536 [U] 3.32 68.07
Ae:78 [MET] A2:1677 [U] 3.98 68.07
Ae:79 [HIS] A2:1224 [A] 2.83 A2:1644 [PSU] 50.21
Ae:79 [HIS] A2:1225 [G] 4.31 A2:1643 [U] 50.21
Ae:80 [GLY] A2:1224 [A] 3.64 A2:1644 [PSU] 65.1
Ae:80 [GLY] A2:1225 [G] 3.7 A2:1643 [U] 65.1
Ae:80 [GLY] A2:1652 [A] 3.51 A2:1674 [U] sugar:BB 65.1
Ae:80 [GLY] A2:1653 [G] 3.54 A2:1673 [U] 65.1
Ae:81 [ARG] A2:1225 [G] 4.31 A2:1643 [U] 56.62
Ae:81 [ARG] A2:1534 [A] 3.05 A2:1603 [U] sugar:SC 56.62
Ae:81 [ARG] A2:1535 [C] 2.75 A2:1601 [G] 56.62
Ae:81 [ARG] A2:1536 [U] 3.43 56.62
Ae:81 [ARG] A2:1537 [G] 4.59 A2:1598 [C] 56.62
Ae:81 [ARG] A2:1653 [G] 4.42 A2:1673 [U] 56.62
Ae:82 [ASN] A2:1536 [U] 2.61 sugar:SC, sugar:SC base/AA stacks 76.68
Ae:82 [ASN] A2:1537 [G] 4.61 A2:1598 [C] 76.68
Ae:83 [ASN] A2:1223 [G] 4.63 A2:1645 [C] 65.78
Ae:83 [ASN] A2:1224 [A] 3.66 A2:1644 [PSU] 65.78
Ae:83 [ASN] A2:1651 [A] 3.87 A2:1675 [G] 65.78
Ae:83 [ASN] A2:1652 [A] 2.67 A2:1674 [U] sugar:SC 65.78
Ae:83 [ASN] A2:1653 [G] 4.06 A2:1673 [U] 65.78
Ae:83 [ASN] A2:1674 [U] 4.58 A2:1652 [A] 65.78
Ae:84 [GLY] A2:1651 [A] 4.81 A2:1675 [G] 95.4
Ae:84 [GLY] A2:1652 [A] 4.26 A2:1674 [U] 95.4
Ae:84 [GLY] A2:1674 [U] 2.25 A2:1652 [A] sugar:BB 95.4
Ae:84 [GLY] A2:1675 [G] 3.37 A2:1651 [A] 95.4
Ae:85 [LYS] A2:1537 [G] 3.78 A2:1598 [C] 86.72
Ae:85 [LYS] A2:1591 [C] 3.66 86.72
Ae:85 [LYS] A2:1592 [C] 2.66 86.72
Ae:85 [LYS] A2:1653 [G] 4.44 A2:1673 [U] 86.72
Ae:85 [LYS] A2:1674 [U] 4.25 A2:1652 [A] 86.72
Ae:86 [LYS] A2:1674 [U] 4.56 A2:1652 [A] 81.66
Ae:86 [LYS] A2:1675 [G] 3.57 A2:1651 [A] 81.66
Ae:86 [LYS] A2:1676 [A] 3.17 A2:1650 [U] 81.66
Ae:87 [LEU] A2:1592 [C] 3.37 0.0
Ae:87 [LEU] A2:1593 [C] 4.02 A2:1542 [G] 0.0
Ae:87 [LEU] A2:1675 [G] 4.69 A2:1651 [A] 0.0
Ae:88 [MET] A2:1536 [U] 3.42 29.56
Ae:88 [MET] A2:1537 [G] 3.29 A2:1598 [C] 29.56
Ae:88 [MET] A2:1592 [C] 4.29 29.56
Ae:88 [MET] A2:1593 [C] 3.22 A2:1542 [G] 29.56
Ae:89 [THR] A2:1536 [U] 4.37 53.04
Ae:91 [ARG] A2:1536 [U] 4.69 36.33
Ae:91 [ARG] A2:1537 [G] 4.76 A2:1598 [C] 36.33
Ae:91 [ARG] A2:1593 [C] 3.99 A2:1542 [G] 36.33
Ae:91 [ARG] A2:1594 [C] 4.87 A2:1541 [G] 36.33
Ae:92 [ILE] A2:1536 [U] 3.66 54.04
Ae:127 [ARG] A2:1220 [C] 3.45 77.52
Ae:127 [ARG] A2:1221 [A] 2.96 A2:1216 [C] 77.52
Ae:130 [ARG] A2:1684 [C] 3.45 32.8
Ae:145 [ARG] A2:1221 [A] 3.01 A2:1216 [C] sugar:SC 96.9
Ae:145 [ARG] A2:1222 [G] 3.27 A2:1646 [C] 96.9
Ae:145 [ARG] A2:1678 [U] 4.72 A2:1648 [A] 96.9
Ae:145 [ARG] A2:1679 [A2M] 4.37 96.9
Ae:148 [ASN] A2:1678 [U] 3.13 A2:1648 [A] 93.87
Ae:148 [ASN] A2:1679 [A2M] 3.07 93.87
Ae:152 [TRP] A2:1222 [G] 4.1 A2:1646 [C] 74.72
Ae:152 [TRP] A2:1223 [G] 2.88 A2:1645 [C] 74.72
Ae:152 [TRP] A2:1677 [U] 4.18 74.72
Ae:155 [CYS] A2:1536 [U] 4.71 60.24
Ae:159 [ARG] A2:1536 [U] 2.91 base:SC 42.14
Ae:162 [ALA] A2:1535 [C] 4.33 A2:1601 [G] 73.11
Ae:162 [ALA] A2:1536 [U] 3.75 73.11
Ae:163 [PHE] A2:1534 [A] 3.42 A2:1603 [U] 38.22
Ae:163 [PHE] A2:1535 [C] 3.46 A2:1601 [G] 38.22
Ae:163 [PHE] A2:1637 [G] 4.98 38.22
Ae:163 [PHE] A2:1638 [A] 3.62 38.22
Ae:164 [ARG] A2:1533 [C] 4.45 A2:1639 [G] 63.89
Ae:164 [ARG] A2:1534 [A] 2.6 A2:1603 [U] 63.89
Ae:164 [ARG] A2:1535 [C] 2.74 A2:1601 [G] 63.89
Ae:164 [ARG] A2:1600 [U] 3.11 A2:1599 [G] 63.89
Ae:164 [ARG] A2:1601 [G] 4.89 A2:1535 [C] 63.89
Ae:164 [ARG] A2:1637 [G] 3.57 63.89
Ae:165 [ASN] A2:1535 [C] 3.49 A2:1601 [G] sugar:BB 55.58
Ae:165 [ASN] A2:1600 [U] 3.39 A2:1599 [G] 55.58
Ae:166 [ILE] A2:1535 [C] 3.96 A2:1601 [G] 60.06
Ae:166 [ILE] A2:1599 [G] 3.37 A2:1600 [U] base:BB 60.06
Ae:166 [ILE] A2:1600 [U] 3.48 A2:1599 [G] 60.06
Ae:167 [LYS] A2:1535 [C] 4.41 A2:1601 [G] 42.28
Ae:167 [LYS] A2:1536 [U] 4.21 42.28
Ae:168 [THR] A2:1536 [U] 3.57 60.57
Ae:169 [ILE] A2:1536 [U] 3.15 46.23

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group112 7O7Y_Ae_A2 Ae: Ribosomal protein s5, Oryctolagus cuniculus (natural) A2: 18s rRNA, Oryctolagus cuniculus (natural) G1TFM5 Ribosomal protein S7 Eukaryotic small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1g_1a 7O7Y_Ae_A2 0.45 0.93 2.9 0.21 Ribosomal protein S7 compare
7K00_G_A 7O7Y_Ae_A2 0.46 0.91 2.33 0.23 Ribosomal protein S7 compare
6S0X_g_a 7O7Y_Ae_A2 0.53 0.9 3.5 0.26 Ribosomal protein S7 compare
4YBB_AG_AA 7O7Y_Ae_A2 0.47 0.9 4.12 0.19 Ribosomal protein S7 compare
4W2F_AG_AA 7O7Y_Ae_A2 0.48 0.93 1.93 0.19 Ribosomal protein S7 compare