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All interfaces > All interologs > Interface groups > group113 > 1DFU_P_M,N vs 7RYG_U_B

Interface analysis


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Common contacts -

1DFU_P
1DFU_M,N
7RYG_U
7RYG_B
Conserved?
P:19 [ARG] M:94 [A] U:23 [ARG] B:91 [A] ✔
P:19 [ARG] M:95 [U] U:23 [ARG] B:92 [U] ✔
P:90 [ASP] M:102 [G] U:94 [ASP] B:99 [G] ✔
P:31 [TYR] M:103 [U] U:35 [TYR] B:100 [U] ✔
P:31 [TYR] M:104 [A] U:35 [TYR] B:101 [A] ✔
P:92 [VAL] M:104 [A] U:96 [LYS] B:101 [A] ✔
P:75 [GLN] M:103 [U] U:79 [GLN] B:100 [U] ✔
P:75 [GLN] M:104 [A] U:79 [GLN] B:101 [A] ✔
P:18 [ARG] M:92 [C] U:22 [ARG] B:89 [C] ✔
P:18 [ARG] M:93 [C] U:22 [ARG] B:90 [C] ✔
P:13 [GLY] M:98 [G] U:17 [GLY] B:95 [G] ✔
P:14 [LYS] M:97 [C] U:18 [LYS] B:94 [U] ✔
P:14 [LYS] M:98 [G] U:18 [LYS] B:95 [G] ✔
P:32 [GLY] M:104 [A] U:36 [GLY] B:101 [A] ✔
P:15 [GLY] M:94 [A] U:19 [GLY] B:91 [A] ✔
P:19 [ARG] M:93 [C] U:23 [ARG] B:90 [C] ❌ 7RYG_U_B
P:90 [ASP] M:103 [U] U:94 [ASP] B:100 [U] ❌ 7RYG_U_B
P:92 [VAL] M:105 [G] U:96 [LYS] B:102 [A] ❌ 1DFU_M:105 no longer at interface
P:76 [ASP] M:102 [G] U:80 [ALA] B:99 [G] ❌ 7RYG_U:80 no longer at interface
P:33 [GLY] M:104 [A] U:37 [GLY] B:101 [A] ❌ 7RYG_U:37 no longer at interface
P:11 [GLU] M:95 [U] U:15 [LYS] B:92 [U] ❌ 7RYG_U:15 no longer at interface
P:22 [ALA] M:93 [C] U:26 [ARG] B:90 [C] ❌ 1DFU_P:22 no longer at interface
P:22 [ALA] M:92 [C] U:26 [ARG] B:89 [C] ❌ 1DFU_P:22 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L25-like 0.81 0.59 0.47 0.95 0.33 0.95 0.53 0.80 0.70 0.78 0.75


Other pairs involving 1DFU_P_M,N or 7RYG_U_B

Total number of entries: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DFU_P_M,N 4YBB_DW_DB 0.97 0.83 0.3 0.53 Ribosomal protein L25-like compare
1DFU_P_M,N 7RYG_U_B 0.80 0.81 0.59 0.47 Ribosomal protein L25-like compare
1DFU_P_M,N 6YSI_R_5 0.80 0.81 0.65 0.47 Ribosomal protein L25-like compare
1FEU_A_B,C 7RYG_U_B 0.65 0.54 0.98 0.32 Ribosomal protein L25-like compare
4Y4O_1Z_1B 7RYG_U_B 0.59 0.82 1.7 0.32 Ribosomal protein L25-like 5S ribosomal RNA compare
4YBB_DW_DB 7RYG_U_B 0.91 0.93 1.12 0.86 Ribosomal protein L25-like 5S ribosomal RNA compare