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All interfaces > All interologs > Interface groups > group113 > 1FEU_A_B,C vs 4Y4O_1Z_1B

Interface analysis


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Common contacts -

1FEU_A
1FEU_B,C
4Y4O_1Z
4Y4O_1B
Conserved?
A:29 [TYR] B:73 [A] 1Z:29 [TYR] 1B:73 [A] ✔
A:29 [TYR] B:74 [U] 1Z:29 [TYR] 1B:74 [U] ✔
A:29 [TYR] C:190 [U] 1Z:29 [TYR] 1B:104 [U] ✔
A:29 [TYR] C:191 [A] 1Z:29 [TYR] 1B:105 [A] ✔
A:19 [ARG] B:76 [G] 1Z:19 [ARG] 1B:76 [G] ✔
A:19 [ARG] B:77 [U] 1Z:19 [ARG] 1B:77 [U] ✔
A:89 [PHE] C:191 [A] 1Z:89 [PHE] 1B:105 [A] ✔
A:89 [PHE] C:192 [G] 1Z:89 [PHE] 1B:106 [G] ✔
A:84 [GLU] B:76 [G] 1Z:84 [GLU] 1B:76 [G] ✔
A:84 [GLU] B:77 [U] 1Z:84 [GLU] 1B:77 [U] ✔
A:36 [LYS] B:75 [G] 1Z:36 [LYS] 1B:75 [G] ✔
A:10 [ARG] B:75 [G] 1Z:10 [ARG] 1B:75 [G] ✔
A:10 [ARG] B:76 [G] 1Z:10 [ARG] 1B:76 [G] ✔
A:75 [ASN] B:75 [G] 1Z:75 [ASN] 1B:75 [G] ✔
A:75 [ASN] B:76 [G] 1Z:75 [ASN] 1B:76 [G] ✔
A:25 [PRO] B:76 [G] 1Z:25 [PRO] 1B:76 [G] ✔
A:15 [PRO] B:76 [G] 1Z:15 [PRO] 1B:76 [G] ✔
A:15 [PRO] B:77 [U] 1Z:15 [PRO] 1B:77 [U] ✔
A:73 [GLN] B:75 [G] 1Z:73 [GLN] 1B:75 [G] ✔
A:73 [GLN] C:189 [G] 1Z:73 [GLN] 1B:103 [G] ✔
A:73 [GLN] C:190 [U] 1Z:73 [GLN] 1B:104 [U] ✔
A:14 [LYS] C:180 [C] 1Z:14 [LYS] 1B:95 [C] ✔
A:14 [LYS] C:181 [A] 1Z:14 [LYS] 1B:96 [U] ✔
A:26 [GLY] B:75 [G] 1Z:26 [GLY] 1B:75 [G] ✔
A:27 [LEU] B:74 [U] 1Z:27 [VAL] 1B:74 [U] ✔
A:27 [LEU] B:75 [G] 1Z:27 [VAL] 1B:75 [G] ✔
A:85 [HIS] B:75 [G] 1Z:85 [HIS] 1B:75 [G] ✔
A:85 [HIS] B:76 [G] 1Z:85 [HIS] 1B:76 [G] ✔
A:20 [ARG] C:180 [C] 1Z:20 [ARG] 1B:95 [C] ✔
A:34 [ASN] B:73 [A] 1Z:34 [ASN] 1B:73 [A] ✔
A:34 [ASN] B:74 [U] 1Z:34 [ASN] 1B:74 [U] ✔
A:16 [SER] B:77 [U] 1Z:16 [SER] 1B:77 [U] ✔
A:30 [ASN] C:191 [A] 1Z:30 [ASN] 1B:105 [A] ✔
A:87 [ASP] B:75 [G] 1Z:87 [ASP] 1B:75 [G] ✔
A:87 [ASP] C:189 [G] 1Z:87 [ASP] 1B:103 [G] ✔
A:87 [ASP] C:190 [U] 1Z:87 [ASP] 1B:104 [U] ✔
A:31 [ARG] C:191 [A] 1Z:31 [ARG] 1B:105 [A] ✔
A:31 [ARG] C:192 [G] 1Z:31 [ARG] 1B:106 [G] ✔
A:72 [ARG] C:190 [U] 1Z:72 [ARG] 1B:104 [U] ✔
A:72 [ARG] C:191 [A] 1Z:72 [ARG] 1B:105 [A] ✔
A:36 [LYS] B:76 [G] 1Z:36 [LYS] 1B:76 [G] ❌ 4Y4O_1Z_1B
A:34 [ASN] B:75 [G] 1Z:34 [ASN] 1B:75 [G] ❌ 4Y4O_1Z_1B
A:16 [SER] C:180 [C] 1Z:16 [SER] 1B:95 [C] ❌ 4Y4O_1Z_1B
A:30 [ASN] C:192 [G] 1Z:30 [ASN] 1B:106 [G] ❌ 4Y4O_1Z_1B
A:78 [LYS] C:187 [G] 1Z:78 [LYS] 1B:101 [G] ❌ 4Y4O_1Z:78, 4Y4O_1B:101 no longer at interface
A:20 [ARG] C:179 [C] 1Z:20 [ARG] 1B:94 [C] ❌ 4Y4O_1B:94 no longer at interface
A:31 [ARG] C:193 [G] 1Z:31 [ARG] 1B:107 [G] ❌ 4Y4O_1B:107 no longer at interface
A:73 [GLN] C:188 [A] 1Z:73 [GLN] 1B:102 [A] ❌ 1FEU_C:188 no longer at interface
A:79 [ARG] C:177 [C] 1Z:79 [ARG] 1B:92 [C] ❌ 1FEU_A:79, 1FEU_C:177 no longer at interface
A:79 [ARG] C:178 [C] 1Z:79 [ARG] 1B:93 [G] ❌ 1FEU_A:79, 1FEU_C:178 no longer at interface
A:80 [ARG] C:177 [C] 1Z:80 [ARG] 1B:92 [C] ❌ 1FEU_A:80, 1FEU_C:177 no longer at interface
A:80 [ARG] C:178 [C] 1Z:80 [ARG] 1B:93 [G] ❌ 1FEU_A:80, 1FEU_C:178 no longer at interface
A:17 [ALA] C:180 [C] 1Z:17 [ALA] 1B:95 [C] ❌ 4Y4O_1Z:17 no longer at interface
A:94 [GLU] C:192 [G] 1Z:94 [GLU] 1B:106 [G] ❌ 4Y4O_1Z:94 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L25-like 0.83 1.11 0.71 0.87 0.44 0.91 0.79 0.85 0.95 0.61 0.71


Other pairs involving 1FEU_A_B,C or 4Y4O_1Z_1B

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1FEU_A_B,C 6S0Z_T_B 0.64 0.54 0.91 0.3 Ribosomal protein L25-like compare
1FEU_A_B,C 7RYG_U_B 0.65 0.54 0.98 0.32 Ribosomal protein L25-like compare
1FEU_A_B,C 4Y4O_1Z_1B 0.85 0.83 1.11 0.71 Ribosomal protein L25-like compare
1FEU_A_B,C 7ASM_T_B 0.63 0.54 0.97 0.29 Ribosomal protein L25-like compare
1FEU_A_B,C 4YBB_DW_DB 0.68 0.54 1.06 0.25 Ribosomal protein L25-like compare
1FEU_A_B,C 6YSI_R_5 0.67 0.55 1.0 0.3 Ribosomal protein L25-like compare
4Y4O_1Z_1B 6S0Z_T_B 0.63 0.87 1.54 0.35 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 7ASM_T_B 0.61 0.88 1.55 0.35 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 7RYG_U_B 0.59 0.82 1.7 0.32 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 6YSI_R_5 0.60 0.87 1.36 0.3 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 4YBB_DW_DB 0.66 0.87 1.58 0.26 Ribosomal protein L25-like 5S ribosomal RNA compare