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All interfaces > All interologs > Interface groups > group113 > 1FEU_A_B,C vs 6YSI_R_5

Interface analysis


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Common contacts -

1FEU_A
1FEU_B,C
6YSI_R
6YSI_5
Conserved?
A:29 [TYR] B:73 [A] R:35 [TYR] 5:72 [A] ✔
A:29 [TYR] B:74 [U] R:35 [TYR] 5:73 [U] ✔
A:29 [TYR] C:190 [U] R:35 [TYR] 5:101 [U] ✔
A:29 [TYR] C:191 [A] R:35 [TYR] 5:102 [A] ✔
A:19 [ARG] B:76 [G] R:25 [ARG] 5:75 [G] ✔
A:19 [ARG] B:77 [U] R:25 [ARG] 5:76 [U] ✔
A:89 [PHE] C:191 [A] R:96 [LYS] 5:102 [A] ✔
A:89 [PHE] C:192 [G] R:96 [LYS] 5:103 [A] ✔
A:84 [GLU] B:76 [G] R:91 [MET] 5:75 [G] ✔
A:84 [GLU] B:77 [U] R:91 [MET] 5:76 [U] ✔
A:10 [ARG] B:75 [G] R:11 [ARG] 5:74 [G] ✔
A:10 [ARG] B:76 [G] R:11 [ARG] 5:75 [G] ✔
A:75 [ASN] B:75 [G] R:82 [GLN] 5:74 [G] ✔
A:75 [ASN] B:76 [G] R:82 [GLN] 5:75 [G] ✔
A:25 [PRO] B:76 [G] R:31 [PRO] 5:75 [G] ✔
A:15 [PRO] B:76 [G] R:21 [SER] 5:75 [G] ✔
A:15 [PRO] B:77 [U] R:21 [SER] 5:76 [U] ✔
A:26 [GLY] B:75 [G] R:32 [ALA] 5:74 [G] ✔
A:27 [LEU] B:74 [U] R:33 [ILE] 5:73 [U] ✔
A:27 [LEU] B:75 [G] R:33 [ILE] 5:74 [G] ✔
A:85 [HIS] B:75 [G] R:92 [HIS] 5:74 [G] ✔
A:85 [HIS] B:76 [G] R:92 [HIS] 5:75 [G] ✔
A:20 [ARG] C:179 [C] R:26 [ARG] 5:90 [C] ✔
A:20 [ARG] C:180 [C] R:26 [ARG] 5:91 [C] ✔
A:34 [ASN] B:73 [A] R:41 [PRO] 5:72 [A] ✔
A:34 [ASN] B:74 [U] R:41 [PRO] 5:73 [U] ✔
A:16 [SER] B:77 [U] R:22 [ARG] 5:76 [U] ✔
A:16 [SER] C:180 [C] R:22 [ARG] 5:91 [C] ✔
A:30 [ASN] C:191 [A] R:36 [GLY] 5:102 [A] ✔
A:87 [ASP] B:75 [G] R:94 [ASP] 5:74 [G] ✔
A:87 [ASP] C:189 [G] R:94 [ASP] 5:100 [G] ✔
A:87 [ASP] C:190 [U] R:94 [ASP] 5:101 [U] ✔
A:72 [ARG] C:190 [U] R:79 [GLN] 5:101 [U] ✔
A:72 [ARG] C:191 [A] R:79 [GLN] 5:102 [A] ✔
A:17 [ALA] C:180 [C] R:23 [ARG] 5:91 [C] ❌ 6YSI_R_5
A:34 [ASN] B:75 [G] R:41 [PRO] 5:74 [G] ❌ 6YSI_R_5
A:30 [ASN] C:192 [G] R:36 [GLY] 5:103 [A] ❌ 6YSI_R_5
A:16 [SER] C:179 [C] R:22 [ARG] 5:90 [C] ❌ 1FEU_A_B,C
A:17 [ALA] C:182 [U] R:23 [ARG] 5:93 [U] ❌ 1FEU_A_B,C
A:17 [ALA] C:181 [A] R:23 [ARG] 5:92 [A] ❌ 1FEU_A_B,C
A:75 [ASN] B:77 [U] R:82 [GLN] 5:76 [U] ❌ 1FEU_A_B,C
A:78 [LYS] C:187 [G] R:85 [PRO] 5:98 [G] ❌ 6YSI_R:85, 6YSI_5:98 no longer at interface
A:31 [ARG] C:193 [G] R:38 [ASN] 5:104 [G] ❌ 6YSI_R:38, 6YSI_5:104 no longer at interface
A:16 [SER] B:79 [G] R:22 [ARG] 5:78 [G] ❌ 1FEU_B:79 no longer at interface
A:16 [SER] B:78 [A] R:22 [ARG] 5:77 [A] ❌ 1FEU_B:78 no longer at interface
A:36 [LYS] B:75 [G] R:43 [ALA] 5:74 [G] ❌ 6YSI_R:43 no longer at interface
A:36 [LYS] B:76 [G] R:43 [ALA] 5:75 [G] ❌ 6YSI_R:43 no longer at interface
A:73 [GLN] B:75 [G] R:80 [ALA] 5:74 [G] ❌ 6YSI_R:80 no longer at interface
A:73 [GLN] C:189 [G] R:80 [ALA] 5:100 [G] ❌ 6YSI_R:80 no longer at interface
A:73 [GLN] C:190 [U] R:80 [ALA] 5:101 [U] ❌ 6YSI_R:80 no longer at interface
A:14 [LYS] C:180 [C] R:20 [ALA] 5:91 [C] ❌ 6YSI_R:20 no longer at interface
A:14 [LYS] C:181 [A] R:20 [ALA] 5:92 [A] ❌ 6YSI_R:20 no longer at interface
A:14 [LYS] C:182 [U] R:20 [ALA] 5:93 [U] ❌ 6YSI_R:20 no longer at interface
A:31 [ARG] C:191 [A] R:38 [ASN] 5:102 [A] ❌ 6YSI_R:38 no longer at interface
A:31 [ARG] C:192 [G] R:38 [ASN] 5:103 [A] ❌ 6YSI_R:38 no longer at interface
A:13 [GLU] B:76 [G] R:15 [LYS] 5:75 [G] ❌ 1FEU_A:13 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L25-like 0.55 1.0 0.30 0.85 0.49 0.78 0.87 0.67 0.75 0.29 0.68


Other pairs involving 1FEU_A_B,C or 6YSI_R_5

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DFU_P_M,N 6YSI_R_5 0.80 0.81 0.65 0.47 Ribosomal protein L25-like compare
6S0Z_T_B 6YSI_R_5 0.71 0.9 1.95 0.39 Ribosomal protein L25-like 5S ribosomal RNA compare
6YSI_R_5 7ASM_T_B 0.65 0.9 2.0 0.39 Ribosomal protein L25-like 5S ribosomal RNA compare
1FEU_A_B,C 6S0Z_T_B 0.64 0.54 0.91 0.3 Ribosomal protein L25-like compare
1FEU_A_B,C 7RYG_U_B 0.65 0.54 0.98 0.32 Ribosomal protein L25-like compare
1FEU_A_B,C 4Y4O_1Z_1B 0.85 0.83 1.11 0.71 Ribosomal protein L25-like compare
1FEU_A_B,C 7ASM_T_B 0.63 0.54 0.97 0.29 Ribosomal protein L25-like compare
1FEU_A_B,C 4YBB_DW_DB 0.68 0.54 1.06 0.25 Ribosomal protein L25-like compare
1FEU_A_B,C 6YSI_R_5 0.67 0.55 1.0 0.3 Ribosomal protein L25-like compare
4Y4O_1Z_1B 6YSI_R_5 0.60 0.87 1.36 0.3 Ribosomal protein L25-like 5S ribosomal RNA compare
4YBB_DW_DB 6YSI_R_5 0.92 0.97 0.56 0.83 Ribosomal protein L25-like 5S ribosomal RNA compare