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All interfaces > All interologs > Interface groups > group113 > 4Y4O_1Z_1B vs 7RYG_U_B

Interface analysis


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Common contacts -

4Y4O_1Z
4Y4O_1B
7RYG_U
7RYG_B
Conserved?
1Z:29 [TYR] 1B:73 [A] U:35 [TYR] B:71 [A] ✔
1Z:29 [TYR] 1B:74 [U] U:35 [TYR] B:72 [U] ✔
1Z:29 [TYR] 1B:104 [U] U:35 [TYR] B:100 [U] ✔
1Z:29 [TYR] 1B:105 [A] U:35 [TYR] B:101 [A] ✔
1Z:19 [ARG] 1B:76 [G] U:25 [ARG] B:74 [G] ✔
1Z:19 [ARG] 1B:77 [U] U:25 [ARG] B:75 [U] ✔
1Z:89 [PHE] 1B:105 [A] U:96 [LYS] B:101 [A] ✔
1Z:89 [PHE] 1B:106 [G] U:96 [LYS] B:102 [A] ✔
1Z:84 [GLU] 1B:77 [U] U:91 [MET] B:75 [U] ✔
1Z:10 [ARG] 1B:75 [G] U:11 [ARG] B:73 [G] ✔
1Z:10 [ARG] 1B:76 [G] U:11 [ARG] B:74 [G] ✔
1Z:75 [ASN] 1B:75 [G] U:82 [GLN] B:73 [G] ✔
1Z:75 [ASN] 1B:76 [G] U:82 [GLN] B:74 [G] ✔
1Z:25 [PRO] 1B:76 [G] U:31 [PRO] B:74 [G] ✔
1Z:15 [PRO] 1B:76 [G] U:21 [SER] B:74 [G] ✔
1Z:15 [PRO] 1B:77 [U] U:21 [SER] B:75 [U] ✔
1Z:26 [GLY] 1B:75 [G] U:32 [ALA] B:73 [G] ✔
1Z:27 [VAL] 1B:74 [U] U:33 [ILE] B:72 [U] ✔
1Z:27 [VAL] 1B:75 [G] U:33 [ILE] B:73 [G] ✔
1Z:85 [HIS] 1B:75 [G] U:92 [HIS] B:73 [G] ✔
1Z:85 [HIS] 1B:76 [G] U:92 [HIS] B:74 [G] ✔
1Z:34 [ASN] 1B:73 [A] U:41 [PRO] B:71 [A] ✔
1Z:34 [ASN] 1B:74 [U] U:41 [PRO] B:72 [U] ✔
1Z:16 [SER] 1B:77 [U] U:22 [ARG] B:75 [U] ✔
1Z:30 [ASN] 1B:105 [A] U:36 [GLY] B:101 [A] ✔
1Z:87 [ASP] 1B:75 [G] U:94 [ASP] B:73 [G] ✔
1Z:87 [ASP] 1B:103 [G] U:94 [ASP] B:99 [G] ✔
1Z:72 [ARG] 1B:104 [U] U:79 [GLN] B:100 [U] ✔
1Z:72 [ARG] 1B:105 [A] U:79 [GLN] B:101 [A] ✔
1Z:84 [GLU] 1B:76 [G] U:91 [MET] B:74 [G] ❌ 7RYG_U_B
1Z:20 [ARG] 1B:95 [C] U:26 [ARG] B:91 [A] ❌ 7RYG_U_B
1Z:87 [ASP] 1B:104 [U] U:94 [ASP] B:100 [U] ❌ 7RYG_U_B
1Z:16 [SER] 1B:93 [G] U:22 [ARG] B:89 [C] ❌ 4Y4O_1Z_1B
1Z:20 [ARG] 1B:93 [G] U:26 [ARG] B:89 [C] ❌ 4Y4O_1Z_1B
1Z:75 [ASN] 1B:77 [U] U:82 [GLN] B:75 [U] ❌ 4Y4O_1Z_1B
1Z:87 [ASP] 1B:74 [U] U:94 [ASP] B:72 [U] ❌ 4Y4O_1Z_1B
1Z:79 [ARG] 1B:92 [C] U:86 [ALA] B:88 [C] ❌ 7RYG_U:86, 7RYG_B:88 no longer at interface
1Z:73 [GLN] 1B:102 [A] U:80 [ALA] B:98 [A] ❌ 7RYG_U:80, 7RYG_B:98 no longer at interface
1Z:80 [ARG] 1B:92 [C] U:87 [LYS] B:88 [C] ❌ 7RYG_U:87, 7RYG_B:88 no longer at interface
1Z:16 [SER] 1B:78 [A] U:22 [ARG] B:76 [A] ❌ 4Y4O_1B:78 no longer at interface
1Z:16 [SER] 1B:94 [C] U:22 [ARG] B:90 [C] ❌ 4Y4O_1B:94 no longer at interface
1Z:20 [ARG] 1B:94 [C] U:26 [ARG] B:90 [C] ❌ 4Y4O_1B:94 no longer at interface
1Z:36 [LYS] 1B:75 [G] U:43 [ALA] B:73 [G] ❌ 7RYG_U:43 no longer at interface
1Z:79 [ARG] 1B:93 [G] U:86 [ALA] B:89 [C] ❌ 7RYG_U:86 no longer at interface
1Z:73 [GLN] 1B:75 [G] U:80 [ALA] B:73 [G] ❌ 7RYG_U:80 no longer at interface
1Z:73 [GLN] 1B:103 [G] U:80 [ALA] B:99 [G] ❌ 7RYG_U:80 no longer at interface
1Z:73 [GLN] 1B:104 [U] U:80 [ALA] B:100 [U] ❌ 7RYG_U:80 no longer at interface
1Z:80 [ARG] 1B:93 [G] U:87 [LYS] B:89 [C] ❌ 7RYG_U:87 no longer at interface
1Z:14 [LYS] 1B:95 [C] U:20 [ALA] B:91 [A] ❌ 7RYG_U:20 no longer at interface
1Z:14 [LYS] 1B:96 [U] U:20 [ALA] B:92 [U] ❌ 7RYG_U:20 no longer at interface
1Z:31 [ARG] 1B:105 [A] U:37 [GLY] B:101 [A] ❌ 7RYG_U:37 no longer at interface
1Z:31 [ARG] 1B:106 [G] U:37 [GLY] B:102 [A] ❌ 7RYG_U:37 no longer at interface
1Z:17 [ALA] 1B:96 [U] U:23 [ARG] B:92 [U] ❌ 4Y4O_1Z:17 no longer at interface
1Z:17 [ALA] 1B:95 [C] U:23 [ARG] B:91 [A] ❌ 4Y4O_1Z:17 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L25-like 5S ribosomal RNA 0.82 1.7 0.32 0.84 0.83 0.77 0.86 0.59 0.73 0.32 0.72


Other pairs involving 4Y4O_1Z_1B or 7RYG_U_B

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DFU_P_M,N 7RYG_U_B 0.80 0.81 0.59 0.47 Ribosomal protein L25-like compare
1FEU_A_B,C 7RYG_U_B 0.65 0.54 0.98 0.32 Ribosomal protein L25-like compare
1FEU_A_B,C 4Y4O_1Z_1B 0.85 0.83 1.11 0.71 Ribosomal protein L25-like compare
4Y4O_1Z_1B 6S0Z_T_B 0.63 0.87 1.54 0.35 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 7ASM_T_B 0.61 0.88 1.55 0.35 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 7RYG_U_B 0.59 0.82 1.7 0.32 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 6YSI_R_5 0.60 0.87 1.36 0.3 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 4YBB_DW_DB 0.66 0.87 1.58 0.26 Ribosomal protein L25-like 5S ribosomal RNA compare
4YBB_DW_DB 7RYG_U_B 0.91 0.93 1.12 0.86 Ribosomal protein L25-like 5S ribosomal RNA compare