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All interfaces > All interologs > Interface groups > group114 > 1FFY_A_T

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Licorice
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Licorice
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Chain
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

1FFY_A
1FFY_T
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:3 [TYR] T:34 [G] 3.66 64.45
A:4 [GLU] T:34 [G] 3.29 71.15
A:7 [LEU] T:34 [G] 3.35 74.11
A:9 [MET] T:34 [G] 2.86 87.04
A:9 [MET] T:35 [A] 3.96 87.04
A:10 [PRO] T:35 [A] 4.82 96.05
A:16 [MET] T:35 [A] 3.51 77.34
A:16 [MET] T:36 [U] 4.27 T:33 [U] 77.34
A:16 [MET] T:37 [A] 3.52 77.34
A:16 [MET] T:38 [A] 3.18 T:32 [C] 77.34
A:17 [ARG] T:37 [A] 3.01 69.69
A:195 [GLU] T:74 [C] 4.61 81.8
A:314 [HIS] T:73 [A] 4.48 73.67
A:314 [HIS] T:74 [C] 3.95 73.67
A:315 [VAL] T:73 [A] 2.94 95.5
A:315 [VAL] T:74 [C] 4.25 95.5
A:332 [GLU] T:74 [C] 4.48 31.92
A:333 [ASP] T:73 [A] 4.27 80.47
A:333 [ASP] T:74 [C] 2.5 80.47
A:436 [TRP] T:4 [C] 3.25 T:69 [G] 22.85
A:436 [TRP] T:5 [U] 3.41 T:68 [G] 22.85
A:439 [THR] T:3 [G] 4.81 T:70 [C] 54.65
A:439 [THR] T:4 [C] 3.53 T:69 [G] 54.65
A:440 [ARG] T:3 [G] 3.53 T:70 [C] 82.29
A:440 [ARG] T:4 [C] 4.08 T:69 [G] 82.29
A:440 [ARG] T:69 [G] 4.46 T:4 [C] 82.29
A:440 [ARG] T:70 [C] 2.94 T:3 [G] base:SC 82.29
A:440 [ARG] T:71 [C] 3.76 T:2 [G] sugar:SC 82.29
A:443 [ASN] T:3 [G] 3.15 T:70 [C] sugar:SC 64.8
A:443 [ASN] T:4 [C] 4.19 T:69 [G] 64.8
A:556 [SER] T:70 [C] 3.25 T:3 [G] sugar:SC 70.31
A:557 [ASP] T:70 [C] 3.34 T:3 [G] 98.75
A:557 [ASP] T:71 [C] 3.61 T:2 [G] 98.75
A:560 [ARG] T:71 [C] 2.81 T:2 [G] sugar:SC, sugar:SC 94.29
A:560 [ARG] T:72 [C] 2.77 T:1 [G] sugar:SC 94.29
A:587 [PHE] T:69 [G] 4.69 T:4 [C] 89.43
A:587 [PHE] T:70 [C] 3.59 T:3 [G] 89.43
A:587 [PHE] T:71 [C] 4.6 T:2 [G] 89.43
A:589 [MET] T:68 [G] 4.59 T:5 [U] 76.86
A:589 [MET] T:69 [G] 2.91 T:4 [C] 76.86
A:591 [GLY] T:12 [U] 4.55 T:23 [A] 54.34
A:592 [GLU] T:68 [G] 4.62 T:5 [U] 45.76
A:593 [GLY] T:68 [G] 2.68 T:5 [U] sugar:BB 86.54
A:593 [GLY] T:69 [G] 3.55 T:4 [C] 86.54
A:594 [LYS] T:68 [G] 3.95 T:5 [U] 55.52
A:594 [LYS] T:69 [G] 3.72 T:4 [C] 55.52
A:595 [LYS] T:68 [G] 4.59 T:5 [U] 90.48
A:595 [LYS] T:69 [G] 2.95 T:4 [C] 90.48
A:595 [LYS] T:70 [C] 2.83 T:3 [G] 90.48
A:624 [SER] T:12 [U] 2.69 T:23 [A] sugar:BB 76.05
A:624 [SER] T:13 [C] 3.72 T:22 [G] 76.05
A:625 [THR] T:12 [U] 4.42 T:23 [A] 63.44
A:625 [THR] T:13 [C] 3.53 T:22 [G] 63.44
A:626 [ASP] T:12 [U] 4.87 T:23 [A] 75.07
A:626 [ASP] T:13 [C] 2.84 T:22 [G] 75.07
A:626 [ASP] T:14 [A] 4.96 T:8 [U] 75.07
A:629 [ALA] T:5 [U] 4.8 T:68 [G] 48.53
A:629 [ALA] T:6 [U] 4.18 T:67 [A] 48.53
A:630 [ASP] T:68 [G] 4.56 T:5 [U] 80.29
A:630 [ASP] T:69 [G] 2.84 T:4 [C] sugar:SC 80.29
A:632 [ARG] T:11 [C] 4.83 T:24 [G] 46.4
A:632 [ARG] T:12 [U] 2.71 T:23 [A] 46.4
A:632 [ARG] T:13 [C] 2.9 T:22 [G] 46.4
A:636 [GLU] T:10 [G] 2.98 T:25 [C] sugar:SC 36.81
A:636 [GLU] T:11 [C] 3.36 T:24 [G] 36.81
A:637 [ILE] T:11 [C] 3.96 T:24 [G] 58.49
A:637 [ILE] T:12 [U] 3.97 T:23 [A] 58.49
A:639 [LYS] T:26 [G] 4.33 T:44 [A] 37.8
A:640 [GLN] T:10 [G] 3.93 T:25 [C] 39.51
A:640 [GLN] T:11 [C] 2.55 T:24 [G] base:SC 39.51
A:640 [GLN] T:12 [U] 3.47 T:23 [A] 39.51
A:640 [GLN] T:24 [G] 3.42 T:11 [C] 39.51
A:640 [GLN] T:25 [C] 3.09 T:10 [G] base:SC 39.51
A:643 [ASP] T:25 [C] 4.43 T:10 [G] 58.5
A:643 [ASP] T:26 [G] 3.87 T:44 [A] 58.5
A:644 [ASP] T:24 [G] 4.86 T:11 [C] 13.56
A:644 [ASP] T:25 [C] 4.26 T:10 [G] 13.56
A:647 [LYS] T:35 [A] 4.71 77.68
A:647 [LYS] T:39 [G] 2.77 T:31 [C] 77.68
A:647 [LYS] T:40 [G] 4.39 T:30 [C] 77.68
A:650 [ASN] T:35 [A] 3.39 base/AA stacks 93.4
A:650 [ASN] T:38 [A] 2.73 T:32 [C] sugar:SC 93.4
A:650 [ASN] T:39 [G] 3.38 T:31 [C] 93.4
A:651 [THR] T:35 [A] 4.42 86.65
A:653 [ARG] T:35 [A] 3.36 sugar:SC 87.04
A:653 [ARG] T:36 [U] 3.03 T:33 [U] 87.04
A:654 [PHE] T:35 [A] 3.27 base/AA stacks 83.61
A:702 [LEU] T:12 [U] 4.02 T:23 [A] 59.23
A:702 [LEU] T:13 [C] 3.33 T:22 [G] 59.23
A:702 [LEU] T:14 [A] 4.8 T:8 [U] 59.23
A:703 [ASN] T:14 [A] 4.59 T:8 [U] 14.2
A:705 [TYR] T:12 [U] 4.14 T:23 [A] 21.28
A:706 [GLN] T:12 [U] 3.14 T:23 [A] base:SC 55.42
A:706 [GLN] T:13 [C] 3.6 T:22 [G] 55.42
A:706 [GLN] T:23 [A] 3.99 T:12 [U] 55.42
A:706 [GLN] T:24 [G] 4.85 T:11 [C] 55.42
A:709 [GLN] T:24 [G] 2.81 T:11 [C] sugar:SC 39.72
A:709 [GLN] T:25 [C] 3.83 T:10 [G] 39.72
A:710 [ASN] T:23 [A] 2.53 T:12 [U] sugar:SC, sugar:SC 55.05
A:710 [ASN] T:24 [G] 3.01 T:11 [C] 55.05
A:713 [ASN] T:24 [G] 3.4 T:11 [C] 60.63
A:713 [ASN] T:25 [C] 3.42 T:10 [G] 60.63
A:713 [ASN] T:40 [G] 4.75 T:30 [C] 60.63
A:714 [VAL] T:24 [G] 3.92 T:11 [C] 55.12
A:717 [SER] T:35 [A] 3.33 base:SC 96.99
A:717 [SER] T:39 [G] 3.32 T:31 [C] 96.99
A:717 [SER] T:40 [G] 2.64 T:30 [C] 96.99
A:718 [ASN] T:25 [C] 4.9 T:10 [G] 80.17
A:718 [ASN] T:40 [G] 3.03 T:30 [C] 80.17
A:718 [ASN] T:41 [G] 3.43 T:29 [C] 80.17
A:721 [LEU] T:35 [A] 4.33 60.25
A:722 [ASP] T:39 [G] 3.8 T:31 [C] 76.53
A:722 [ASP] T:40 [G] 3.26 T:30 [C] 76.53
A:725 [LYS] T:35 [A] 3.08 94.64
A:725 [LYS] T:39 [G] 3.08 T:31 [C] sugar:SC 94.64
A:729 [TYR] T:34 [G] 2.75 94.37
A:729 [TYR] T:35 [A] 2.67 94.37
A:730 [ILE] T:34 [G] 4.0 66.88
A:805 [ARG] T:40 [G] 4.25 T:30 [C] 83.99
A:805 [ARG] T:41 [G] 3.11 T:29 [C] 83.99
A:806 [ASP] T:42 [U] 4.15 T:28 [A] 10.45
A:809 [ASN] T:41 [G] 3.59 T:29 [C] 54.63
A:809 [ASN] T:42 [U] 3.82 T:28 [A] 54.63
A:810 [ARG] T:42 [U] 3.57 T:28 [A] 49.94
A:810 [ARG] T:43 [G] 3.85 T:27 [C] 49.94
A:813 [GLU] T:30 [C] 4.59 T:40 [G] 82.74
A:813 [GLU] T:40 [G] 4.19 T:30 [C] 82.74
A:813 [GLU] T:41 [G] 2.58 T:29 [C] base:SC, sugar:SC 82.74
A:813 [GLU] T:42 [U] 2.93 T:28 [A] 82.74
A:816 [ARG] T:30 [C] 4.09 T:40 [G] 75.43
A:816 [ARG] T:31 [C] 3.3 T:39 [G] 75.43
A:816 [ARG] T:40 [G] 4.25 T:30 [C] 75.43
A:816 [ARG] T:41 [G] 3.46 T:29 [C] 75.43
A:817 [ASN] T:30 [C] 4.31 T:40 [G] 35.14
A:819 [LYS] T:30 [C] 4.03 T:40 [G] 55.61
A:819 [LYS] T:31 [C] 3.19 T:39 [G] 55.61
A:822 [GLY] T:31 [C] 3.39 T:39 [G] 54.23
A:822 [GLY] T:32 [C] 4.35 T:38 [A] 54.23
A:823 [LYS] T:31 [C] 3.45 T:39 [G] 55.66
A:823 [LYS] T:32 [C] 3.37 T:38 [A] 55.66
A:823 [LYS] T:33 [U] 3.08 T:36 [U] 55.66
A:885 [LYS] T:33 [U] 4.74 T:36 [U] 74.3
A:887 [GLU] T:34 [G] 3.35 base:BB 39.73
A:888 [ARG] T:34 [G] 2.63 base:BB, base:BB 98.7
A:889 [CYS] T:34 [G] 4.09 92.82
A:890 [TRP] T:33 [U] 3.95 T:36 [U] 81.08
A:890 [TRP] T:34 [G] 3.04 base/AA stacks 81.08

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group114 1FFY_A_T A: Isoleucyl-tRNA synthetase, Staphylococcus aureus (genetically engineered) T: Isoleucyl-tRNA P41972 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & HUP domains & A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & Rubredoxin-related & Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1FFY_A_T 1U0B_B_A 0.54 0.69 1.86 0.12 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA compare