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All interfaces > All interologs > Interface groups > group114 > 1U0B_B_A vs 3ZGZ_A_B

Interface analysis


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Licorice
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Licorice
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Common contacts -

1U0B_B
1U0B_A
3ZGZ_A
3ZGZ_B
Conserved?
B:230 [LEU] A:75 [C] A:533 [HIS] B:76 [A] ✔
B:361 [ASP] A:23 [U] A:731 [GLU] B:23 [C] ✔
B:166 [GLY] A:1 [G] A:292 [GLU] B:1 [G] ✔
B:166 [GLY] A:72 [C] A:292 [GLU] B:72 [C] ✔
B:158 [GLN] A:3 [C] A:222 [ASN] B:3 [C] ✔
B:264 [ARG] A:69 [C] A:616 [GLY] B:69 [G] ✔
B:318 [ARG] A:24 [G] A:672 [ARG] B:24 [A] ✔
B:318 [ARG] A:39 [U] A:672 [ARG] B:40 [C] ✔
B:353 [PRO] A:13 [A] A:723 [ASN] B:13 [G] ✔
B:353 [PRO] A:14 [A] A:723 [ASN] B:14 [A] ✔
B:360 [PHE] A:23 [U] A:730 [MET] B:23 [C] ✔
B:360 [PHE] A:24 [G] A:730 [MET] B:24 [A] ✔
B:205 [TRP] A:75 [C] A:492 [THR] B:76 [A] ✔
B:314 [ALA] A:24 [G] A:668 [ARG] B:24 [A] ✔
B:314 [ALA] A:25 [U] A:668 [ARG] B:25 [C] ✔
B:297 [HIS] A:13 [A] A:651 [PRO] B:13 [G] ✔
B:297 [HIS] A:14 [A] A:651 [PRO] B:14 [A] ✔
B:261 [MET] A:69 [C] A:570 [LEU] B:69 [G] ✔
B:261 [MET] A:70 [G] A:570 [LEU] B:70 [G] ✔
B:311 [GLN] A:24 [G] A:665 [GLY] B:24 [A] ✔
B:311 [GLN] A:25 [U] A:665 [GLY] B:25 [C] ✔
B:354 [GLU] A:14 [A] A:724 [THR] B:14 [A] ✔
B:354 [GLU] A:15 [G] A:724 [THR] B:15 [A] ✔
B:364 [ARG] A:24 [G] A:734 [ASN] B:24 [A] ✔
B:357 [SER] A:22 [A] A:727 [ALA] B:22 [A] ✔
B:357 [SER] A:23 [U] A:727 [ALA] B:23 [C] ✔
B:300 [SER] A:14 [A] A:654 [MET] B:14 [A] ✔
B:167 [ALA] A:72 [C] A:293 [ALA] B:72 [C] ✔
B:321 [THR] A:38 [A] A:675 [LYS] B:39 [U] ✔
B:321 [THR] A:39 [U] A:675 [LYS] B:40 [C] ✔
B:296 [GLY] A:13 [A] A:650 [SER] B:13 [G] ✔
B:265 [GLU] A:69 [C] A:617 [MET] B:69 [G] ✔
B:265 [GLU] A:70 [G] A:617 [MET] B:70 [G] ✔
B:270 [SER] A:74 [C] A:623 [SER] B:75 [C] ✔
B:229 [ASP] A:71 [C] A:532 [GLU] B:71 [G] ✔
B:229 [ASP] A:75 [C] A:532 [GLU] B:76 [A] ✔
B:232 [PHE] A:71 [C] A:535 [ILE] B:71 [G] ✔
B:266 [LYS] A:70 [G] A:618 [SER] B:70 [G] ✔
B:233 [PRO] A:73 [U] A:536 [MET] B:74 [C] ✔
B:233 [PRO] A:75 [C] A:536 [MET] B:76 [A] ✔
B:301 [GLN] A:13 [A] A:655 [THR] B:13 [G] ✔
B:301 [GLN] A:69 [C] A:655 [THR] B:69 [G] ✔
B:368 [ARG] A:40 [C] A:738 [LYS] B:41 [C] ✔
B:259 [MET] A:70 [G] A:568 [MET] B:70 [G] ✔
B:228 [SER] A:70 [G] A:531 [ILE] B:70 [G] ✔
B:206 [HIS] A:75 [C] A:493 [PHE] B:76 [A] ✔
B:166 [GLY] A:73 [U] A:292 [GLU] B:74 [C] ❌ 3ZGZ_A_B
B:158 [GLN] A:2 [G] A:222 [ASN] B:2 [C] ❌ 3ZGZ_A_B
B:264 [ARG] A:70 [G] A:616 [GLY] B:70 [G] ❌ 3ZGZ_A_B
B:318 [ARG] A:25 [U] A:672 [ARG] B:25 [C] ❌ 3ZGZ_A_B
B:318 [ARG] A:40 [C] A:672 [ARG] B:41 [C] ❌ 3ZGZ_A_B
B:353 [PRO] A:22 [A] A:723 [ASN] B:22 [A] ❌ 3ZGZ_A_B
B:205 [TRP] A:74 [C] A:492 [THR] B:75 [C] ❌ 3ZGZ_A_B
B:308 [ASN] A:12 [A] A:662 [GLY] B:12 [G] ❌ 3ZGZ_A_B
B:348 [ASP] A:15 [G] A:718 [ARG] B:15 [A] ❌ 3ZGZ_A_B
B:311 [GLN] A:11 [C] A:665 [GLY] B:11 [U] ❌ 3ZGZ_A_B
B:354 [GLU] A:22 [A] A:724 [THR] B:22 [A] ❌ 3ZGZ_A_B
B:364 [ARG] A:40 [C] A:734 [ASN] B:41 [C] ❌ 3ZGZ_A_B
B:295 [SER] A:13 [A] A:648 [PHE] B:13 [G] ❌ 3ZGZ_A_B
B:167 [ALA] A:73 [U] A:293 [ALA] B:74 [C] ❌ 3ZGZ_A_B
B:296 [GLY] A:14 [A] A:650 [SER] B:14 [A] ❌ 3ZGZ_A_B
B:307 [GLU] A:11 [C] A:661 [SER] B:11 [U] ❌ 3ZGZ_A_B
B:270 [SER] A:75 [C] A:623 [SER] B:76 [A] ❌ 3ZGZ_A_B
B:232 [PHE] A:72 [C] A:535 [ILE] B:72 [C] ❌ 3ZGZ_A_B
B:232 [PHE] A:73 [U] A:535 [ILE] B:74 [C] ❌ 3ZGZ_A_B
B:179 [MET] A:73 [U] A:418 [ARG] B:74 [C] ❌ 3ZGZ_A_B
B:233 [PRO] A:74 [C] A:536 [MET] B:75 [C] ❌ 3ZGZ_A_B
B:301 [GLN] A:70 [G] A:655 [THR] B:70 [G] ❌ 3ZGZ_A_B
B:268 [SER] A:75 [C] A:621 [SER] B:76 [A] ❌ 3ZGZ_A_B
B:206 [HIS] A:74 [C] A:493 [PHE] B:75 [C] ❌ 3ZGZ_A_B
B:158 [GLN] A:4 [G] A:222 [ASN] B:4 [C] ❌ 1U0B_B_A
B:166 [GLY] A:2 [G] A:292 [GLU] B:2 [C] ❌ 1U0B_B_A
B:167 [ALA] A:1 [G] A:293 [ALA] B:1 [G] ❌ 1U0B_B_A
B:31 [THR] A:75 [C] A:43 [TYR] B:76 [A] ❌ 1U0B_B_A
B:229 [ASP] A:70 [G] A:532 [GLU] B:70 [G] ❌ 1U0B_B_A
B:233 [PRO] A:72 [C] A:536 [MET] B:72 [C] ❌ 1U0B_B_A
B:266 [LYS] A:69 [C] A:618 [SER] B:69 [G] ❌ 1U0B_B_A
B:268 [SER] A:74 [C] A:621 [SER] B:75 [C] ❌ 1U0B_B_A
B:295 [SER] A:12 [A] A:648 [PHE] B:12 [G] ❌ 1U0B_B_A
B:295 [SER] A:24 [G] A:648 [PHE] B:24 [A] ❌ 1U0B_B_A
B:295 [SER] A:23 [U] A:648 [PHE] B:23 [C] ❌ 1U0B_B_A
B:296 [GLY] A:12 [A] A:650 [SER] B:12 [G] ❌ 1U0B_B_A
B:300 [SER] A:13 [A] A:654 [MET] B:13 [G] ❌ 1U0B_B_A
B:307 [GLU] A:25 [U] A:661 [SER] B:25 [C] ❌ 1U0B_B_A
B:308 [ASN] A:25 [U] A:662 [GLY] B:25 [C] ❌ 1U0B_B_A
B:308 [ASN] A:24 [G] A:662 [GLY] B:24 [A] ❌ 1U0B_B_A
B:361 [ASP] A:22 [A] A:731 [GLU] B:22 [A] ❌ 1U0B_B_A
B:364 [ARG] A:23 [U] A:734 [ASN] B:23 [C] ❌ 1U0B_B_A
B:341 [ARG] A:16 [C] A:711 [LYS] B:16 [U] ❌ 1U0B_B:341, 1U0B_A:16 no longer at interface
B:344 [GLU] A:16 [C] A:714 [ASP] B:16 [U] ❌ 1U0B_B:344, 1U0B_A:16 no longer at interface
B:345 [ALA] A:16 [C] A:715 [ASP] B:16 [U] ❌ 1U0B_B:345, 1U0B_A:16 no longer at interface
B:348 [ASP] A:16 [C] A:718 [ARG] B:16 [U] ❌ 1U0B_A:16 no longer at interface
B:349 [ASP] A:16 [C] A:719 [ARG] B:16 [U] ❌ 1U0B_B:349, 1U0B_A:16 no longer at interface
B:315 [ALA] A:24 [G] A:669 [PHE] B:24 [A] ❌ 3ZGZ_A:669 no longer at interface
B:163 [LEU] A:72 [C] A:227 [SER] B:72 [C] ❌ 3ZGZ_A:227 no longer at interface
B:163 [LEU] A:73 [U] A:227 [SER] B:74 [C] ❌ 3ZGZ_A:227 no longer at interface
B:367 [ASN] A:39 [U] A:737 [ALA] B:40 [C] ❌ 3ZGZ_A:737 no longer at interface
B:367 [ASN] A:40 [C] A:737 [ALA] B:41 [C] ❌ 3ZGZ_A:737 no longer at interface
B:356 [TYR] A:23 [U] A:726 [ILE] B:23 [C] ❌ 3ZGZ_A:726 no longer at interface
B:156 [SER] A:3 [C] A:220 [GLN] B:3 [C] ❌ 3ZGZ_A:220 no longer at interface
B:363 [ALA] A:40 [C] A:733 [MET] B:41 [C] ❌ 3ZGZ_A:733 no longer at interface
B:351 [ASN] A:14 [A] A:721 [THR] B:14 [A] ❌ 3ZGZ_A:721 no longer at interface
B:351 [ASN] A:15 [G] A:721 [THR] B:15 [A] ❌ 3ZGZ_A:721 no longer at interface
B:168 [ARG] A:73 [U] A:294 [GLU] B:74 [C] ❌ 3ZGZ_A:294 no longer at interface
B:168 [ARG] A:74 [C] A:294 [GLU] B:75 [C] ❌ 3ZGZ_A:294 no longer at interface
B:303 [ASN] A:13 [A] A:657 [GLU] B:13 [G] ❌ 3ZGZ_A:657 no longer at interface
B:162 [GLN] A:2 [G] A:226 [ARG] B:2 [C] ❌ 3ZGZ_A:226 no longer at interface
B:324 [ARG] A:38 [A] A:678 [TYR] B:39 [U] ❌ 3ZGZ_A:678 no longer at interface
B:157 [ARG] A:3 [C] A:221 [ARG] B:3 [C] ❌ 3ZGZ_A:221 no longer at interface
B:234 [HIS] A:75 [C] A:537 [HIS] B:76 [A] ❌ 3ZGZ_A:537 no longer at interface
B:141 [ASP] A:73 [U] A:190 [GLN] B:74 [C] ❌ 1U0B_B:141 no longer at interface
B:159 [ASP] A:71 [C] A:223 [TRP] B:71 [G] ❌ 1U0B_B:159 no longer at interface
B:159 [ASP] A:72 [C] A:223 [TRP] B:72 [C] ❌ 1U0B_B:159 no longer at interface
B:182 [VAL] A:73 [U] A:421 [GLY] B:74 [C] ❌ 1U0B_B:182 no longer at interface
B:184 [TRP] A:73 [U] A:423 [SER] B:74 [C] ❌ 1U0B_B:184 no longer at interface
B:185 [LYS] A:73 [U] A:424 [ARG] B:74 [C] ❌ 1U0B_B:185 no longer at interface
B:186 [MET] A:73 [U] A:425 [GLN] B:74 [C] ❌ 1U0B_B:186 no longer at interface
B:187 [SER] A:73 [U] A:426 [ARG] B:74 [C] ❌ 1U0B_B:187 no longer at interface
B:187 [SER] A:74 [C] A:426 [ARG] B:75 [C] ❌ 1U0B_B:187 no longer at interface
B:187 [SER] A:75 [C] A:426 [ARG] B:76 [A] ❌ 1U0B_B:187 no longer at interface
B:204 [GLY] A:73 [U] A:491 [ASP] B:74 [C] ❌ 1U0B_B:204 no longer at interface
B:209 [CYS] A:75 [C] A:496 [SER] B:76 [A] ❌ 1U0B_B:209 no longer at interface
B:237 [ASN] A:73 [U] A:540 [TYR] B:74 [C] ❌ 1U0B_B:237 no longer at interface
B:269 [LYS] A:74 [C] A:622 [LYS] B:75 [C] ❌ 1U0B_B:269 no longer at interface
B:269 [LYS] A:75 [C] A:622 [LYS] B:76 [A] ❌ 1U0B_B:269 no longer at interface
B:302 [LEU] A:12 [A] A:656 [LEU] B:12 [G] ❌ 1U0B_B:302 no longer at interface
B:302 [LEU] A:13 [A] A:656 [LEU] B:13 [G] ❌ 1U0B_B:302 no longer at interface
B:305 [SER] A:12 [A] A:659 [GLN] B:12 [G] ❌ 1U0B_B:305 no longer at interface
B:305 [SER] A:11 [C] A:659 [GLN] B:11 [U] ❌ 1U0B_B:305 no longer at interface
B:310 [LYS] A:25 [U] A:664 [GLU] B:25 [C] ❌ 1U0B_B:310 no longer at interface
B:317 [GLU] A:38 [A] A:671 [LYS] B:39 [U] ❌ 1U0B_B:317 no longer at interface
B:349 [ASP] A:15 [G] A:719 [ARG] B:15 [A] ❌ 1U0B_B:349 no longer at interface
B:68 [THR] A:75 [C] A:80 [ASP] B:76 [A] ❌ 1U0B_B:68 no longer at interface
B:70 [ILE] A:75 [C] A:82 [PHE] B:76 [A] ❌ 1U0B_B:70 no longer at interface
B:71 [ASP] A:75 [C] A:83 [GLY] B:76 [A] ❌ 1U0B_B:71 no longer at interface
B:72 [ASP] A:74 [C] A:84 [LEU] B:75 [C] ❌ 1U0B_B:72 no longer at interface
B:72 [ASP] A:75 [C] A:84 [LEU] B:76 [A] ❌ 1U0B_B:72 no longer at interface
B:73 [LYS] A:74 [C] A:85 [PRO] B:75 [C] ❌ 1U0B_B:73 no longer at interface
B:73 [LYS] A:75 [C] A:85 [PRO] B:76 [A] ❌ 1U0B_B:73 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA 0.69 2.56 0.06 0.7 0.54 0.48 0.8 0.33 0.25 0.03 0.55


Other pairs involving 1U0B_B_A or 3ZGZ_A_B

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1FFY_A_T 1U0B_B_A 0.54 0.69 1.86 0.12 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA compare
1U0B_B_A 3ZGZ_A_B 0.33 0.69 2.56 0.06 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA compare
1U0B_B_A 4CQN_A_B 0.35 0.69 2.61 0.05 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA compare
3ZGZ_A_B 3ZJT_A_B 0.47 0.9 3.08 0.61 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & beta-grasp fold domain in leucine-tRNA ligase & Rubredoxin-related & Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) tRNA compare
3ZGZ_A_B 3ZJV_A_B 0.58 0.92 2.97 0.66 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & beta-grasp fold domain in leucine-tRNA ligase & Rubredoxin-related & Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) tRNA compare
3ZGZ_A_B 4CQN_A_B 0.95 0.99 0.65 0.95 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & HUP domains & beta-grasp fold domain in leucine-tRNA ligase & Rubredoxin-related & Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) tRNA compare
3ZGZ_A_B 4ARC_A_B 0.59 0.9 3.25 0.5 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & beta-grasp fold domain in leucine-tRNA ligase & Rubredoxin-related & Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) tRNA compare
3ZGZ_A_B 5AH5_B_D 0.38 0.87 3.47 0.21 acid protease & Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & beta-grasp fold domain in leucine-tRNA ligase & Rubredoxin-related tRNA compare