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All interfaces > All interologs > Interface groups > group115 > 1JJ2_O_0 vs 6AZ3_Q_4

Interface analysis


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Licorice
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Common contacts -

1JJ2_O
1JJ2_0
6AZ3_Q
6AZ3_4
Conserved?
O:61 [ARG] 0:2736 [U] Q:62 [ARG] 4:95 [U] ✔
O:61 [ARG] 0:2737 [C] Q:62 [ARG] 4:96 [C] ✔
O:61 [ARG] 0:2738 [G] Q:62 [ARG] 4:97 [G] ✔
O:61 [ARG] 0:2739 [A] Q:62 [ARG] 4:98 [A] ✔
O:56 [GLY] 0:2737 [C] Q:57 [VAL] 4:96 [C] ✔
O:58 [SER] 0:2736 [U] Q:59 [SER] 4:95 [U] ✔
O:58 [SER] 0:2737 [C] Q:59 [SER] 4:96 [C] ✔
O:58 [SER] 0:2738 [G] Q:59 [SER] 4:97 [G] ✔
O:60 [GLY] 0:2738 [G] Q:61 [ALA] 4:97 [G] ✔
O:57 [ASN] 0:2736 [U] Q:58 [HIS] 4:95 [U] ✔
O:57 [ASN] 0:2737 [C] Q:58 [HIS] 4:96 [C] ✔
O:56 [GLY] 0:2736 [U] Q:57 [VAL] 4:95 [U] ❌ 1JJ2_O_0
O:56 [GLY] 0:2738 [G] Q:57 [VAL] 4:97 [G] ❌ 1JJ2_O_0
O:61 [ARG] 0:2735 [U] Q:62 [ARG] 4:94 [G] ❌ 1JJ2_O_0
O:79 [SER] 0:2733 [U] Q:80 [ARG] 4:92 [U] ❌ 1JJ2_0:2733 no longer at interface
O:79 [SER] 0:2734 [G] Q:80 [ARG] 4:93 [U] ❌ 1JJ2_0:2734 no longer at interface
O:55 [LYS] 0:2736 [U] Q:56 [LYS] 4:95 [U] ❌ 6AZ3_Q:56 no longer at interface
O:55 [LYS] 0:2737 [C] Q:56 [LYS] 4:96 [C] ❌ 6AZ3_Q:56 no longer at interface
O:65 [ARG] 0:2735 [U] Q:66 [MET] 4:94 [G] ❌ 6AZ3_Q:66 no longer at interface
O:64 [GLU] 0:2739 [A] Q:65 [LYS] 4:98 [A] ❌ 1JJ2_O:64 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L19 (L19e) C-terminal domain 0.78 1.97 0.29 0.94 0.79 0.86 0.71 0.75 0.57 0.67 0.67


Other pairs involving 1JJ2_O_0 or 6AZ3_Q_4

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_O_0 6AZ3_Q_1 0.79 0.76 1.54 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 1YHQ_P_0 1.00 1.0 0.13 0.98 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1JJ2_O_0 6AZ3_Q_2 0.74 0.8 1.53 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 7O7Y_BR_B5 0.84 0.94 1.43 0.33 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 1VQ8_P_0 0.99 1.0 0.24 0.98 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1JJ2_O_0 6AZ3_Q_3 0.89 0.72 1.3 0.3 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 6AZ3_Q_4 0.75 0.78 1.97 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1YHQ_P_0 6AZ3_Q_4 0.74 0.78 2.01 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1VQ8_P_0 6AZ3_Q_4 0.72 0.78 2.0 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
6AZ3_Q_4 7O7Y_BR_B5 0.96 0.89 0.58 0.57 Ribosomal protein L19 (L19e) C-terminal domain Eukaryotic large subunit ribosomal RNA compare