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All interfaces > All interologs > Interface groups > group115 > 1VQ8_P_0 vs 6AZ3_Q_1

Interface analysis


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Common contacts -

1VQ8_P
1VQ8_0
6AZ3_Q
6AZ3_1
Conserved?
P:41 [ARG] 0:1500 [U] Q:42 [ARG] 1:1754 [U] ✔
P:35 [ILE] 0:1423 [C] Q:36 [ASN] 1:1606 [U] ✔
P:35 [ILE] 0:1501 [A] Q:36 [ASN] 1:1755 [U] ✔
P:3 [LEU] 0:1396 [C] Q:4 [LEU] 1:1578 [U] ✔
P:3 [LEU] 0:1397 [C] Q:4 [LEU] 1:1579 [U] ✔
P:23 [PHE] 0:1397 [C] Q:24 [LEU] 1:1579 [U] ✔
P:23 [PHE] 0:1398 [G] Q:24 [LEU] 1:1580 [G] ✔
P:38 [GLU] 0:1501 [A] Q:39 [LYS] 1:1755 [U] ✔
P:1 [THR] 0:1388 [U] Q:2 [VAL] 1:1555 [G] ✔
P:1 [THR] 0:1395 [C] Q:2 [VAL] 1:1577 [G] ✔
P:1 [THR] 0:1396 [C] Q:2 [VAL] 1:1578 [U] ✔
P:21 [VAL] 0:1398 [G] Q:22 [VAL] 1:1580 [G] ✔
P:22 [TRP] 0:1398 [G] Q:23 [TRP] 1:1580 [G] ✔
P:22 [TRP] 0:1399 [A] Q:23 [TRP] 1:1581 [G] ✔
P:94 [TRP] 0:814 [G] Q:95 [TRP] 1:905 [G] ✔
P:94 [TRP] 0:815 [U] Q:95 [TRP] 1:906 [U] ✔
P:94 [TRP] 0:816 [G] Q:95 [TRP] 1:907 [G] ✔
P:36 [THR] 0:1501 [A] Q:37 [SER] 1:1755 [U] ✔
P:129 [GLY] 0:813 [C] Q:130 [ASN] 1:904 [G] ✔
P:129 [GLY] 0:814 [G] Q:130 [ASN] 1:905 [G] ✔
P:130 [GLU] 0:801 [U] Q:131 [VAL] 1:892 [C] ✔
P:85 [GLY] 0:793 [A] Q:86 [GLU] 1:884 [G] ✔
P:127 [GLY] 0:800 [G] Q:128 [LYS] 1:891 [C] ✔
P:24 [ASN] 0:1397 [C] Q:25 [ASP] 1:1579 [U] ✔
P:125 [LYS] 0:801 [U] Q:126 [ARG] 1:892 [C] ✔
P:25 [PRO] 0:1397 [C] Q:26 [PRO] 1:1579 [U] ✔
P:25 [PRO] 0:1398 [G] Q:26 [PRO] 1:1580 [G] ✔
P:5 [ALA] 0:1422 [U] Q:6 [LEU] 1:1605 [G] ✔
P:4 [SER] 0:1396 [C] Q:5 [LYS] 1:1578 [U] ✔
P:4 [SER] 0:1397 [C] Q:5 [LYS] 1:1579 [U] ✔
P:8 [ARG] 0:1421 [C] Q:9 [ARG] 1:1604 [C] ✔
P:8 [ARG] 0:1422 [U] Q:9 [ARG] 1:1605 [G] ✔
P:8 [ARG] 0:1501 [A] Q:9 [ARG] 1:1755 [U] ✔
P:8 [ARG] 0:1502 [A] Q:9 [ARG] 1:1756 [A] ✔
P:90 [SER] 0:815 [U] Q:91 [SER] 1:906 [U] ✔
P:83 [LYS] 0:792 [G] Q:84 [SER] 1:883 [G] ✔
P:83 [LYS] 0:793 [A] Q:84 [SER] 1:884 [G] ✔
P:2 [ASP] 0:1395 [C] Q:3 [SER] 1:1577 [G] ✔
P:2 [ASP] 0:1396 [C] Q:3 [SER] 1:1578 [U] ✔
P:124 [ASP] 0:800 [G] Q:125 [VAL] 1:891 [C] ✔
P:124 [ASP] 0:801 [U] Q:125 [VAL] 1:892 [C] ✔
P:91 [LYS] 0:816 [G] Q:92 [LYS] 1:907 [G] ✔
P:91 [LYS] 0:817 [G] Q:92 [LYS] 1:908 [G] ✔
P:7 [LYS] 0:1397 [C] Q:8 [ALA] 1:1579 [U] ✔
P:128 [GLY] 0:800 [G] Q:129 [GLY] 1:891 [C] ✔
P:128 [GLY] 0:801 [U] Q:129 [GLY] 1:892 [C] ✔
P:128 [GLY] 0:813 [C] Q:129 [GLY] 1:904 [G] ✔
P:37 [ARG] 0:1500 [U] Q:38 [ARG] 1:1754 [U] ✔
P:37 [ARG] 0:1501 [A] Q:38 [ARG] 1:1755 [U] ✔
P:37 [ARG] 0:1502 [A] Q:38 [ARG] 1:1756 [A] ✔
P:86 [ALA] 0:792 [G] Q:87 [ALA] 1:883 [G] ✔
P:86 [ALA] 0:793 [A] Q:87 [ALA] 1:884 [G] ✔
P:9 [LEU] 0:1501 [A] Q:10 [LEU] 1:1755 [U] ✔
P:9 [LEU] 0:1502 [A] Q:10 [LEU] 1:1756 [A] ✔
P:52 [LYS] 0:1398 [G] Q:53 [LYS] 1:1580 [G] ✔
P:52 [LYS] 0:1399 [A] Q:53 [LYS] 1:1581 [G] ✔
P:38 [GLU] 0:1500 [U] Q:39 [LYS] 1:1754 [U] ❌ 6AZ3_Q_1
P:85 [GLY] 0:792 [G] Q:86 [GLU] 1:883 [G] ❌ 6AZ3_Q_1
P:97 [ARG] 0:815 [U] Q:98 [ARG] 1:906 [U] ❌ 6AZ3_Q_1
P:7 [LYS] 0:1398 [G] Q:8 [ALA] 1:1580 [G] ❌ 6AZ3_Q_1
P:128 [GLY] 0:814 [G] Q:129 [GLY] 1:905 [G] ❌ 6AZ3_Q_1
P:125 [LYS] 0:800 [G] Q:126 [ARG] 1:891 [C] ❌ 1VQ8_P_0
P:127 [GLY] 0:814 [G] Q:128 [LYS] 1:905 [G] ❌ 1VQ8_P_0
P:18 [LYS] 0:1397 [C] Q:19 [ARG] 1:1579 [U] ❌ 1VQ8_P_0
P:18 [LYS] 0:1398 [G] Q:19 [ARG] 1:1580 [G] ❌ 1VQ8_P_0
P:5 [ALA] 0:1501 [A] Q:6 [LEU] 1:1755 [U] ❌ 1VQ8_P_0
P:5 [ALA] 0:1421 [C] Q:6 [LEU] 1:1604 [C] ❌ 1VQ8_P_0
P:5 [ALA] 0:1423 [C] Q:6 [LEU] 1:1606 [U] ❌ 1VQ8_P_0
P:95 [GLU] 0:816 [G] Q:96 [MET] 1:907 [G] ❌ 1VQ8_P_0
P:97 [ARG] 0:814 [G] Q:98 [ARG] 1:905 [G] ❌ 1VQ8_P_0
P:41 [ARG] 0:1499 [U] Q:42 [ARG] 1:1753 [A] ❌ 6AZ3_1:1753 no longer at interface
P:1 [THR] 0:1387 [G] Q:2 [VAL] 1:1554 [C] ❌ 6AZ3_1:1554 no longer at interface
P:28 [GLN] 0:1386 [G] Q:29 [ALA] 1:1553 [A] ❌ 6AZ3_Q:29, 6AZ3_1:1553 no longer at interface
P:28 [GLN] 0:1387 [G] Q:29 [ALA] 1:1554 [C] ❌ 6AZ3_Q:29, 6AZ3_1:1554 no longer at interface
P:130 [GLU] 0:802 [G] Q:131 [VAL] 1:893 [G] ❌ 6AZ3_1:893 no longer at interface
P:121 [ASP] 0:802 [G] Q:122 [ASP] 1:893 [G] ❌ 6AZ3_Q:122, 6AZ3_1:893 no longer at interface
P:125 [LYS] 0:802 [G] Q:126 [ARG] 1:893 [G] ❌ 6AZ3_1:893 no longer at interface
P:2 [ASP] 0:1436 [C] Q:3 [SER] 1:1619 [C] ❌ 6AZ3_1:1619 no longer at interface
P:127 [GLY] 0:799 [C] Q:128 [LYS] 1:890 [C] ❌ 1VQ8_0:799 no longer at interface
P:4 [SER] 0:1437 [A] Q:5 [LYS] 1:1620 [G] ❌ 1VQ8_0:1437 no longer at interface
P:55 [LYS] 0:1403 [C] Q:56 [LYS] 1:1585 [C] ❌ 1VQ8_0:1403 no longer at interface
P:85 [GLY] 0:795 [G] Q:86 [GLU] 1:886 [G] ❌ 1VQ8_0:795 no longer at interface
P:28 [GLN] 0:1396 [C] Q:29 [ALA] 1:1578 [U] ❌ 6AZ3_Q:29 no longer at interface
P:28 [GLN] 0:1397 [C] Q:29 [ALA] 1:1579 [U] ❌ 6AZ3_Q:29 no longer at interface
P:84 [ALA] 0:793 [A] Q:85 [ARG] 1:884 [G] ❌ 6AZ3_Q:85 no longer at interface
P:12 [ASP] 0:1502 [A] Q:13 [SER] 1:1756 [A] ❌ 1VQ8_P:12 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain 0.76 1.53 0.35 0.94 0.76 0.97 0.81 0.79 0.74 0.31 0.53


Other pairs involving 1VQ8_P_0 or 6AZ3_Q_1

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_O_0 6AZ3_Q_1 0.79 0.76 1.54 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 1VQ8_P_0 0.99 1.0 0.24 0.98 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1YHQ_P_0 6AZ3_Q_1 0.79 0.76 1.57 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 1YHQ_P_0 1.00 1.0 0.2 0.99 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1VQ8_P_0 6AZ3_Q_3 0.88 0.72 1.35 0.3 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 6AZ3_Q_1 0.79 0.76 1.53 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 6AZ3_Q_4 0.72 0.78 2.0 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1VQ8_P_0 7O7Y_BR_B5 0.83 0.94 1.45 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 6AZ3_Q_2 0.73 0.8 1.52 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
6AZ3_Q_1 7O7Y_BR_B5 0.85 0.92 0.84 0.61 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Eukaryotic large subunit ribosomal RNA compare