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All interfaces > All interologs > Interface groups > group115 > 1YHQ_P_0 vs 6AZ3_Q_2

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

1YHQ_P
1YHQ_0
6AZ3_Q
6AZ3_2
Conserved?
P:69 [ARG] 0:1706 [G] Q:70 [LYS] 2:45 [A] ✔
P:69 [ARG] 0:1707 [G] Q:70 [LYS] 2:46 [U] ✔
P:133 [SER] 0:1793 [C] Q:134 [ASN] 2:131 [G] ✔
P:133 [SER] 0:1794 [G] Q:134 [ASN] 2:132 [G] ✔
P:87 [ARG] 0:1707 [G] Q:88 [ARG] 2:46 [U] ✔
P:87 [ARG] 0:1708 [C] Q:88 [ARG] 2:47 [A] ✔
P:87 [ARG] 0:1800 [G] Q:88 [ARG] 2:350 [U] ✔
P:87 [ARG] 0:1801 [A] Q:88 [ARG] 2:351 [C] ✔
P:78 [GLY] 0:1760 [G] Q:79 [GLY] 2:98 [G] ✔
P:78 [GLY] 0:1784 [U] Q:79 [GLY] 2:122 [U] ✔
P:78 [GLY] 0:1785 [G] Q:79 [GLY] 2:123 [G] ✔
P:82 [GLY] 0:1707 [G] Q:83 [GLY] 2:46 [U] ✔
P:82 [GLY] 0:1708 [C] Q:83 [GLY] 2:47 [A] ✔
P:82 [GLY] 0:1760 [G] Q:83 [GLY] 2:98 [G] ✔
P:82 [GLY] 0:1761 [U] Q:83 [GLY] 2:99 [A] ✔
P:73 [HIS] 0:1788 [U] Q:74 [ARG] 2:126 [U] ✔
P:73 [HIS] 0:1789 [G] Q:74 [ARG] 2:127 [C] ✔
P:19 [ASN] 0:1719 [G] Q:20 [ALA] 2:58 [G] ✔
P:59 [ARG] 0:1704 [G] Q:60 [ARG] 2:43 [G] ✔
P:59 [ARG] 0:1705 [C] Q:60 [ARG] 2:44 [C] ✔
P:88 [GLN] 0:1800 [G] Q:89 [MET] 2:350 [U] ✔
P:54 [LYS] 0:1716 [A] Q:55 [VAL] 2:55 [C] ✔
P:54 [LYS] 0:1717 [A] Q:55 [VAL] 2:56 [U] ✔
P:79 [SER] 0:1707 [G] Q:80 [ARG] 2:46 [U] ✔
P:79 [SER] 0:1760 [G] Q:80 [ARG] 2:98 [G] ✔
P:79 [SER] 0:1784 [U] Q:80 [ARG] 2:122 [U] ✔
P:79 [SER] 0:1785 [G] Q:80 [ARG] 2:123 [G] ✔
P:79 [SER] 0:1786 [C] Q:80 [ARG] 2:124 [G] ✔
P:20 [ARG] 0:1717 [A] Q:21 [ARG] 2:56 [U] ✔
P:20 [ARG] 0:1718 [G] Q:21 [ARG] 2:57 [G] ✔
P:71 [TYR] 0:1789 [G] Q:72 [MET] 2:127 [C] ✔
P:17 [GLY] 0:1718 [G] Q:18 [GLY] 2:57 [G] ✔
P:17 [GLY] 0:1719 [G] Q:18 [GLY] 2:58 [G] ✔
P:16 [VAL] 0:1718 [G] Q:17 [CYS] 2:57 [G] ✔
P:134 [VAL] 0:1793 [C] Q:135 [LYS] 2:131 [G] ✔
P:134 [VAL] 0:1794 [G] Q:135 [LYS] 2:132 [G] ✔
P:134 [VAL] 0:1795 [G] Q:135 [LYS] 2:133 [G] ✔
P:56 [GLY] 0:1716 [A] Q:57 [VAL] 2:55 [C] ✔
P:81 [LYS] 0:1707 [G] Q:82 [GLU] 2:46 [U] ✔
P:81 [LYS] 0:1708 [C] Q:82 [GLU] 2:47 [A] ✔
P:81 [LYS] 0:1760 [G] Q:82 [GLU] 2:98 [G] ✔
P:81 [LYS] 0:1761 [U] Q:82 [GLU] 2:99 [A] ✔
P:81 [LYS] 0:1816 [C] Q:82 [GLU] 2:364 [G] ✔
P:81 [LYS] 0:1817 [U] Q:82 [GLU] 2:365 [G] ✔
P:80 [ARG] 0:1708 [C] Q:81 [ARG] 2:47 [A] ✔
P:80 [ARG] 0:1760 [G] Q:81 [ARG] 2:98 [G] ✔
P:80 [ARG] 0:1761 [U] Q:81 [ARG] 2:99 [A] ✔
P:80 [ARG] 0:1801 [A] Q:81 [ARG] 2:351 [C] ✔
P:80 [ARG] 0:1802 [G] Q:81 [ARG] 2:352 [A] ✔
P:55 [LYS] 0:1716 [A] Q:56 [LYS] 2:55 [C] ✔
P:55 [LYS] 0:1717 [A] Q:56 [LYS] 2:56 [U] ✔
P:83 [LYS] 0:1708 [C] Q:84 [SER] 2:47 [A] ✔
P:83 [LYS] 0:1761 [U] Q:84 [SER] 2:99 [A] ✔
P:83 [LYS] 0:1762 [C] Q:84 [SER] 2:100 [U] ✔
P:62 [ALA] 0:1705 [C] Q:63 [TRP] 2:44 [C] ✔
P:74 [GLN] 0:1786 [C] Q:75 [HIS] 2:124 [G] ✔
P:74 [GLN] 0:1787 [C] Q:75 [HIS] 2:125 [C] ✔
P:75 [LYS] 0:1800 [G] Q:76 [ASN] 2:350 [U] ✔
P:75 [LYS] 0:1801 [A] Q:76 [ASN] 2:351 [C] ✔
P:57 [ASN] 0:1704 [G] Q:58 [HIS] 2:43 [G] ✔
P:57 [ASN] 0:1715 [C] Q:58 [HIS] 2:54 [U] ✔
P:57 [ASN] 0:1716 [A] Q:58 [HIS] 2:55 [C] ✔
P:135 [ALA] 0:1793 [C] Q:136 [ARG] 2:131 [G] ✔
P:18 [LYS] 0:1718 [G] Q:19 [ARG] 2:57 [G] ✔
P:18 [LYS] 0:1719 [G] Q:19 [ARG] 2:58 [G] ✔
P:86 [ALA] 0:1708 [C] Q:87 [ALA] 2:47 [A] ✔
P:77 [ALA] 0:1760 [G] Q:78 [VAL] 2:98 [G] ✔
P:77 [ALA] 0:1761 [U] Q:78 [VAL] 2:99 [A] ✔
P:77 [ALA] 0:1783 [A] Q:78 [VAL] 2:121 [U] ✔
P:77 [ALA] 0:1784 [U] Q:78 [VAL] 2:122 [U] ✔
P:77 [ALA] 0:1785 [G] Q:78 [VAL] 2:123 [G] ✔
P:84 [ALA] 0:1761 [U] Q:85 [ARG] 2:99 [A] ✔
P:84 [ALA] 0:1762 [C] Q:85 [ARG] 2:100 [U] ✔
P:76 [GLY] 0:1784 [U] Q:77 [GLY] 2:122 [U] ✔
P:76 [GLY] 0:1785 [G] Q:77 [GLY] 2:123 [G] ✔
P:100 [ALA] 0:1794 [G] Q:101 [ILE] 2:132 [G] ✔
P:100 [ALA] 0:1795 [G] Q:101 [ILE] 2:133 [G] ✔
P:66 [GLN] 0:1705 [C] Q:67 [LYS] 2:44 [C] ❌ 6AZ3_Q_2
P:96 [SER] 0:1794 [G] Q:97 [ARG] 2:132 [G] ❌ 6AZ3_Q_2
P:96 [SER] 0:1795 [G] Q:97 [ARG] 2:133 [G] ❌ 6AZ3_Q_2
P:87 [ARG] 0:1799 [G] Q:88 [ARG] 2:349 [C] ❌ 6AZ3_Q_2
P:72 [GLY] 0:1801 [A] Q:73 [GLY] 2:351 [C] ❌ 6AZ3_Q_2
P:72 [GLY] 0:1802 [G] Q:73 [GLY] 2:352 [A] ❌ 6AZ3_Q_2
P:88 [GLN] 0:1793 [C] Q:89 [MET] 2:131 [G] ❌ 6AZ3_Q_2
P:88 [GLN] 0:1799 [G] Q:89 [MET] 2:349 [C] ❌ 6AZ3_Q_2
P:54 [LYS] 0:1718 [G] Q:55 [VAL] 2:57 [G] ❌ 6AZ3_Q_2
P:80 [ARG] 0:1707 [G] Q:81 [ARG] 2:46 [U] ❌ 6AZ3_Q_2
P:80 [ARG] 0:1762 [C] Q:81 [ARG] 2:100 [U] ❌ 6AZ3_Q_2
P:55 [LYS] 0:1715 [C] Q:56 [LYS] 2:54 [U] ❌ 6AZ3_Q_2
P:75 [LYS] 0:1785 [G] Q:76 [ASN] 2:123 [G] ❌ 6AZ3_Q_2
P:75 [LYS] 0:1786 [C] Q:76 [ASN] 2:124 [G] ❌ 6AZ3_Q_2
P:135 [ALA] 0:1794 [G] Q:136 [ARG] 2:132 [G] ❌ 1YHQ_P_0
P:16 [VAL] 0:1717 [A] Q:17 [CYS] 2:56 [U] ❌ 1YHQ_P_0
P:56 [GLY] 0:1715 [C] Q:57 [VAL] 2:54 [U] ❌ 1YHQ_P_0
P:62 [ALA] 0:1706 [G] Q:63 [TRP] 2:45 [A] ❌ 1YHQ_P_0
P:66 [GLN] 0:1799 [G] Q:67 [LYS] 2:349 [C] ❌ 1YHQ_P_0
P:69 [ARG] 0:1800 [G] Q:70 [LYS] 2:350 [U] ❌ 1YHQ_P_0
P:70 [ALA] 0:1799 [G] Q:71 [ASP] 2:349 [C] ❌ 1YHQ_P_0
P:72 [GLY] 0:1789 [G] Q:73 [GLY] 2:127 [C] ❌ 1YHQ_P_0
P:73 [HIS] 0:1787 [C] Q:74 [ARG] 2:125 [C] ❌ 1YHQ_P_0
P:73 [HIS] 0:1786 [C] Q:74 [ARG] 2:124 [G] ❌ 1YHQ_P_0
P:77 [ALA] 0:1762 [C] Q:78 [VAL] 2:100 [U] ❌ 1YHQ_P_0
P:79 [SER] 0:1708 [C] Q:80 [ARG] 2:47 [A] ❌ 1YHQ_P_0
P:84 [ALA] 0:1802 [G] Q:85 [ARG] 2:352 [A] ❌ 1YHQ_P_0
P:84 [ALA] 0:1801 [A] Q:85 [ARG] 2:351 [C] ❌ 1YHQ_P_0
P:85 [GLY] 0:1762 [C] Q:86 [GLU] 2:100 [U] ❌ 1YHQ_P_0
P:88 [GLN] 0:1801 [A] Q:89 [MET] 2:351 [C] ❌ 1YHQ_P_0
P:96 [SER] 0:1793 [C] Q:97 [ARG] 2:131 [G] ❌ 1YHQ_P_0
P:66 [GLN] 0:1798 [C] Q:67 [LYS] 2:348 [A] ❌ 6AZ3_2:348 no longer at interface
P:96 [SER] 0:1796 [A] Q:97 [ARG] 2:346 [C] ❌ 6AZ3_2:346 no longer at interface
P:78 [GLY] 0:1814 [G] Q:79 [GLY] 2:362 [A] ❌ 6AZ3_2:362 no longer at interface
P:73 [HIS] 0:1790 [C] Q:74 [ARG] 2:128 [U] ❌ 6AZ3_2:128 no longer at interface
P:73 [HIS] 0:1803 [C] Q:74 [ARG] 2:353 [G] ❌ 6AZ3_2:353 no longer at interface
P:72 [GLY] 0:1790 [C] Q:73 [GLY] 2:128 [U] ❌ 6AZ3_2:128 no longer at interface
P:19 [ASN] 0:1720 [C] Q:20 [ALA] 2:59 [U] ❌ 6AZ3_2:59 no longer at interface
P:71 [TYR] 0:1790 [C] Q:72 [MET] 2:128 [U] ❌ 6AZ3_2:128 no longer at interface
P:71 [TYR] 0:1791 [U] Q:72 [MET] 2:129 [G] ❌ 6AZ3_2:129 no longer at interface
P:81 [LYS] 0:1709 [G] Q:82 [GLU] 2:48 [G] ❌ 6AZ3_2:48 no longer at interface
P:57 [ASN] 0:1703 [G] Q:58 [HIS] 2:42 [A] ❌ 6AZ3_2:42 no longer at interface
P:70 [ALA] 0:1798 [C] Q:71 [ASP] 2:348 [A] ❌ 6AZ3_2:348 no longer at interface
P:133 [SER] 0:1792 [C] Q:134 [ASN] 2:130 [A] ❌ 1YHQ_0:1792 no longer at interface
P:135 [ALA] 0:1792 [C] Q:136 [ARG] 2:130 [A] ❌ 1YHQ_0:1792 no longer at interface
P:84 [ALA] 0:1763 [C] Q:85 [ARG] 2:101 [G] ❌ 1YHQ_0:1763 no longer at interface
P:132 [ASP] 0:1793 [C] Q:133 [ARG] 2:131 [G] ❌ 6AZ3_Q:133 no longer at interface
P:97 [ARG] 0:1793 [C] Q:98 [ARG] 2:131 [G] ❌ 6AZ3_Q:98 no longer at interface
P:97 [ARG] 0:1794 [G] Q:98 [ARG] 2:132 [G] ❌ 6AZ3_Q:98 no longer at interface
P:93 [ASP] 0:1793 [C] Q:94 [LEU] 2:131 [G] ❌ 6AZ3_Q:94 no longer at interface
P:93 [ASP] 0:1799 [G] Q:94 [LEU] 2:349 [C] ❌ 6AZ3_Q:94 no longer at interface
P:68 [LYS] 0:1787 [C] Q:69 [ALA] 2:125 [C] ❌ 6AZ3_Q:69 no longer at interface
P:68 [LYS] 0:1788 [U] Q:69 [ALA] 2:126 [U] ❌ 6AZ3_Q:69 no longer at interface
P:53 [ASP] 0:1717 [A] Q:54 [PRO] 2:56 [U] ❌ 6AZ3_Q:54 no longer at interface
P:65 [ARG] 0:1705 [C] Q:66 [MET] 2:44 [C] ❌ 6AZ3_Q:66 no longer at interface
P:65 [ARG] 0:1706 [G] Q:66 [MET] 2:45 [A] ❌ 6AZ3_Q:66 no longer at interface
P:103 [THR] 0:1794 [G] Q:104 [ARG] 2:132 [G] ❌ 1YHQ_P:103 no longer at interface
P:103 [THR] 0:1795 [G] Q:104 [ARG] 2:133 [G] ❌ 1YHQ_P:103 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain 0.8 1.55 0.26 0.94 0.81 0.86 0.83 0.73 0.60 0.42 0.47


Other pairs involving 1YHQ_P_0 or 6AZ3_Q_2

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_O_0 1YHQ_P_0 1.00 1.0 0.13 0.98 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1JJ2_O_0 6AZ3_Q_2 0.74 0.8 1.53 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_4 0.74 0.78 2.01 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1YHQ_P_0 6AZ3_Q_1 0.79 0.76 1.57 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_3 0.90 0.72 1.32 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_2 0.73 0.8 1.55 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 7O7Y_BR_B5 0.83 0.94 1.43 0.34 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 1YHQ_P_0 1.00 1.0 0.2 0.99 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1VQ8_P_0 6AZ3_Q_2 0.73 0.8 1.52 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
6AZ3_Q_2 7O7Y_BR_B5 0.86 0.91 0.73 0.58 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Eukaryotic large subunit ribosomal RNA compare