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All interfaces > All interologs > Interface groups > group115 > 1YHQ_P_0 vs 6AZ3_Q_3

Interface analysis


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Common contacts -

1YHQ_P
1YHQ_0
6AZ3_Q
6AZ3_3
Conserved?
P:66 [GLN] 0:1549 [C] Q:67 [LYS] 3:45 [C] ✔
P:123 [TYR] 0:1595 [G] Q:124 [TYR] 3:117 [G] ✔
P:123 [TYR] 0:1596 [U] Q:124 [TYR] 3:118 [U] ✔
P:102 [ARG] 0:1596 [U] Q:103 [ARG] 3:118 [U] ✔
P:102 [ARG] 0:1597 [A] Q:103 [ARG] 3:119 [U] ✔
P:102 [ARG] 0:1598 [A] Q:103 [ARG] 3:120 [G] ✔
P:63 [ARG] 0:1549 [C] Q:64 [ARG] 3:45 [C] ✔
P:63 [ARG] 0:1565 [C] Q:64 [ARG] 3:62 [U] ✔
P:63 [ARG] 0:1566 [C] Q:64 [ARG] 3:63 [C] ✔
P:94 [TRP] 0:1597 [A] Q:95 [TRP] 3:119 [U] ✔
P:94 [TRP] 0:1598 [A] Q:95 [TRP] 3:120 [G] ✔
P:98 [ILE] 0:1597 [A] Q:99 [LEU] 3:119 [U] ✔
P:98 [ILE] 0:1598 [A] Q:99 [LEU] 3:120 [G] ✔
P:127 [GLY] 0:1598 [A] Q:128 [LYS] 3:120 [G] ✔
P:59 [ARG] 0:1548 [U] Q:60 [ARG] 3:44 [C] ✔
P:59 [ARG] 0:1549 [C] Q:60 [ARG] 3:45 [C] ✔
P:59 [ARG] 0:1565 [C] Q:60 [ARG] 3:62 [U] ✔
P:59 [ARG] 0:1566 [C] Q:60 [ARG] 3:63 [C] ✔
P:54 [LYS] 0:1566 [C] Q:55 [VAL] 3:63 [C] ✔
P:54 [LYS] 0:1567 [G] Q:55 [VAL] 3:64 [A] ✔
P:56 [GLY] 0:1566 [C] Q:57 [VAL] 3:63 [C] ✔
P:53 [ASP] 0:1556 [G] Q:54 [PRO] 3:52 [A] ✔
P:95 [GLU] 0:1540 [G] Q:96 [MET] 3:36 [C] ✔
P:95 [GLU] 0:1597 [A] Q:96 [MET] 3:119 [U] ✔
P:55 [LYS] 0:1566 [C] Q:56 [LYS] 3:63 [C] ✔
P:58 [SER] 0:1565 [C] Q:59 [SER] 3:62 [U] ✔
P:58 [SER] 0:1566 [C] Q:59 [SER] 3:63 [C] ✔
P:117 [SER] 0:1592 [G] Q:118 [HIS] 3:114 [C] ✔
P:117 [SER] 0:1593 [C] Q:118 [HIS] 3:115 [G] ✔
P:60 [GLY] 0:1565 [C] Q:61 [ALA] 3:62 [U] ✔
P:60 [GLY] 0:1566 [C] Q:61 [ALA] 3:63 [C] ✔
P:120 [ARG] 0:1593 [C] Q:121 [ARG] 3:115 [G] ✔
P:120 [ARG] 0:1594 [C] Q:121 [ARG] 3:116 [C] ✔
P:120 [ARG] 0:1595 [G] Q:121 [ARG] 3:117 [G] ✔
P:116 [SER] 0:1593 [C] Q:117 [ARG] 3:115 [G] ✔
P:116 [SER] 0:1594 [C] Q:117 [ARG] 3:116 [C] ✔
P:124 [ASP] 0:1595 [G] Q:125 [VAL] 3:117 [G] ✔
P:106 [ARG] 0:1596 [U] Q:107 [ARG] 3:118 [U] ✔
P:57 [ASN] 0:1566 [C] Q:58 [HIS] 3:63 [C] ✔
P:91 [LYS] 0:1539 [U] Q:92 [LYS] 3:35 [U] ✔
P:91 [LYS] 0:1597 [A] Q:92 [LYS] 3:119 [U] ✔
P:99 [ARG] 0:1540 [G] Q:100 [ARG] 3:36 [C] ✔
P:99 [ARG] 0:1541 [G] Q:100 [ARG] 3:37 [A] ✔
P:99 [ARG] 0:1597 [A] Q:100 [ARG] 3:119 [U] ✔
P:109 [ARG] 0:1594 [C] Q:110 [ARG] 3:116 [C] ✔
P:109 [ARG] 0:1595 [G] Q:110 [ARG] 3:117 [G] ✔
P:119 [TYR] 0:1594 [C] Q:120 [TYR] 3:116 [C] ✔
P:119 [TYR] 0:1595 [G] Q:120 [TYR] 3:117 [G] ✔
P:66 [GLN] 0:1548 [U] Q:67 [LYS] 3:44 [C] ❌ 6AZ3_Q_3
P:56 [GLY] 0:1567 [G] Q:57 [VAL] 3:64 [A] ❌ 6AZ3_Q_3
P:95 [GLU] 0:1539 [U] Q:96 [MET] 3:35 [U] ❌ 6AZ3_Q_3
P:57 [ASN] 0:1565 [C] Q:58 [HIS] 3:62 [U] ❌ 6AZ3_Q_3
P:91 [LYS] 0:1598 [A] Q:92 [LYS] 3:120 [G] ❌ 6AZ3_Q_3
P:106 [ARG] 0:1595 [G] Q:107 [ARG] 3:117 [G] ❌ 1YHQ_P_0
P:127 [GLY] 0:1596 [U] Q:128 [LYS] 3:118 [U] ❌ 1YHQ_P_0
P:56 [GLY] 0:1565 [C] Q:57 [VAL] 3:62 [U] ❌ 1YHQ_P_0
P:62 [ALA] 0:1549 [C] Q:63 [TRP] 3:45 [C] ❌ 1YHQ_P_0
P:62 [ALA] 0:1548 [U] Q:63 [TRP] 3:44 [C] ❌ 1YHQ_P_0
P:91 [LYS] 0:1540 [G] Q:92 [LYS] 3:36 [C] ❌ 1YHQ_P_0
P:95 [GLU] 0:1541 [G] Q:96 [MET] 3:37 [A] ❌ 1YHQ_P_0
P:63 [ARG] 0:1550 [A] Q:64 [ARG] 3:46 [A] ❌ 6AZ3_3:46 no longer at interface
P:54 [LYS] 0:1568 [G] Q:55 [VAL] 3:65 [C] ❌ 6AZ3_3:65 no longer at interface
P:116 [SER] 0:1591 [A] Q:117 [ARG] 3:109 [C] ❌ 1YHQ_0:1591 no longer at interface
P:127 [GLY] 0:1599 [U] Q:128 [LYS] 3:121 [U] ❌ 1YHQ_0:1599 no longer at interface
P:51 [ALA] 0:1629 [G] Q:52 [ARG] 3:151 [C] ❌ 1YHQ_P:51, 1YHQ_0:1629 no longer at interface
P:92 [GLU] 0:1541 [G] Q:93 [GLU] 3:37 [A] ❌ 1YHQ_P:92 no longer at interface
P:92 [GLU] 0:1540 [G] Q:93 [GLU] 3:36 [C] ❌ 1YHQ_P:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain 0.72 1.32 0.26 0.94 0.63 0.88 0.7 0.90 0.87 0.86 0.37


Other pairs involving 1YHQ_P_0 or 6AZ3_Q_3

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_O_0 1YHQ_P_0 1.00 1.0 0.13 0.98 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1JJ2_O_0 6AZ3_Q_3 0.89 0.72 1.3 0.3 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_4 0.74 0.78 2.01 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1YHQ_P_0 6AZ3_Q_1 0.79 0.76 1.57 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_3 0.90 0.72 1.32 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 6AZ3_Q_2 0.73 0.8 1.55 0.26 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1YHQ_P_0 7O7Y_BR_B5 0.83 0.94 1.43 0.34 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 1YHQ_P_0 1.00 1.0 0.2 0.99 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Archaeal large subunit ribosomal RNA compare
1VQ8_P_0 6AZ3_Q_3 0.88 0.72 1.35 0.3 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
6AZ3_Q_3 7O7Y_BR_B5 0.82 0.92 0.82 0.52 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare