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All interfaces > All interologs > Interface groups > group115 > 6AZ3_Q_4 vs 7O7Y_BR_B5

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

6AZ3_Q
6AZ3_4
7O7Y_BR
7O7Y_B5
Conserved?
Q:80 [ARG] 4:92 [U] BR:80 [LYS] B5:4388 [U] ✔
Q:80 [ARG] 4:93 [U] BR:80 [LYS] B5:4389 [G] ✔
Q:57 [VAL] 4:95 [U] BR:57 [VAL] B5:4391 [C] ✔
Q:57 [VAL] 4:96 [C] BR:57 [VAL] B5:4392 [U] ✔
Q:57 [VAL] 4:97 [G] BR:57 [VAL] B5:4393 [G] ✔
Q:59 [SER] 4:95 [U] BR:59 [SER] B5:4391 [C] ✔
Q:59 [SER] 4:96 [C] BR:59 [SER] B5:4392 [U] ✔
Q:59 [SER] 4:97 [G] BR:59 [SER] B5:4393 [G] ✔
Q:61 [ALA] 4:97 [G] BR:61 [ALA] B5:4393 [G] ✔
Q:62 [ARG] 4:95 [U] BR:62 [ARG] B5:4391 [C] ✔
Q:62 [ARG] 4:96 [C] BR:62 [ARG] B5:4392 [U] ✔
Q:62 [ARG] 4:97 [G] BR:62 [ARG] B5:4393 [G] ✔
Q:62 [ARG] 4:98 [A] BR:62 [ARG] B5:4394 [A] ✔
Q:58 [HIS] 4:95 [U] BR:58 [HIS] B5:4391 [C] ✔
Q:58 [HIS] 4:96 [C] BR:58 [HIS] B5:4392 [U] ✔
Q:62 [ARG] 4:94 [G] BR:62 [ARG] B5:4390 [G] ❌ 7O7Y_BR_B5
Q:65 [LYS] 4:98 [A] BR:65 [LYS] B5:4394 [A] ❌ 7O7Y_BR:65 no longer at interface
Q:66 [MET] 4:94 [G] BR:66 [ASN] B5:4390 [G] ❌ 6AZ3_Q:66 no longer at interface
Q:70 [LYS] 4:94 [G] BR:70 [ARG] B5:4390 [G] ❌ 6AZ3_Q:70 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L19 (L19e) C-terminal domain Eukaryotic large subunit ribosomal RNA 0.89 0.58 0.57 0.94 0.84 0.86 1.0 0.96 0.77 0.83 0.75


Other pairs involving 6AZ3_Q_4 or 7O7Y_BR_B5

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_O_0 7O7Y_BR_B5 0.84 0.94 1.43 0.33 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1JJ2_O_0 6AZ3_Q_4 0.75 0.78 1.97 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1YHQ_P_0 6AZ3_Q_4 0.74 0.78 2.01 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1YHQ_P_0 7O7Y_BR_B5 0.83 0.94 1.43 0.34 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
1VQ8_P_0 6AZ3_Q_4 0.72 0.78 2.0 0.29 Ribosomal protein L19 (L19e) C-terminal domain compare
1VQ8_P_0 7O7Y_BR_B5 0.83 0.94 1.45 0.35 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
6AZ3_Q_3 7O7Y_BR_B5 0.82 0.92 0.82 0.52 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain compare
6AZ3_Q_1 7O7Y_BR_B5 0.85 0.92 0.84 0.61 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Eukaryotic large subunit ribosomal RNA compare
6AZ3_Q_4 7O7Y_BR_B5 0.96 0.89 0.58 0.57 Ribosomal protein L19 (L19e) C-terminal domain Eukaryotic large subunit ribosomal RNA compare
6AZ3_Q_2 7O7Y_BR_B5 0.86 0.91 0.73 0.58 Ribosomal protein L19 (L19e) C-terminal domain & Ribosomal protein L19 (L19e) N-terminal domain Eukaryotic large subunit ribosomal RNA compare