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All interfaces > All interologs > Interface groups > group116 > 1VQ8_D_9 vs 7O7Y_BJ_B7

Interface analysis


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Common contacts -

1VQ8_D
1VQ8_9
7O7Y_BJ
7O7Y_B7
Conserved?
D:76 [ARG] 9:3042 [C] BJ:75 [ARG] B7:40 [U] ✔
D:76 [ARG] 9:3044 [A] BJ:75 [ARG] B7:42 [A] ✔
D:151 [ILE] 9:3057 [A] BJ:151 [ILE] B7:55 [A] ✔
D:19 [GLU] 9:3044 [A] BJ:18 [ARG] B7:42 [A] ✔
D:154 [LYS] 9:3018 [U] BJ:154 [LYS] B7:18 [C] ✔
D:75 [LEU] 9:3042 [C] BJ:74 [VAL] B7:40 [U] ✔
D:14 [ARG] 9:3056 [A] BJ:13 [ARG] B7:54 [A] ✔
D:73 [VAL] 9:3041 [C] BJ:72 [CYS] B7:39 [C] ✔
D:153 [THR] 9:3017 [G] BJ:153 [ALA] B7:17 [C] ✔
D:137 [PRO] 9:3029 [C] BJ:137 [PRO] B7:28 [C] ✔
D:137 [PRO] 9:3030 [C] BJ:137 [PRO] B7:29 [C] ✔
D:137 [PRO] 9:3056 [A] BJ:137 [PRO] B7:54 [A] ✔
D:50 [VAL] 9:3041 [C] BJ:49 [VAL] B7:39 [C] ✔
D:12 [GLU] 9:3053 [G] BJ:11 [PRO] B7:51 [G] ✔
D:12 [GLU] 9:3054 [A] BJ:11 [PRO] B7:52 [C] ✔
D:145 [ASP] 9:3045 [A] BJ:145 [LYS] B7:43 [U] ✔
D:145 [ASP] 9:3046 [C] BJ:145 [LYS] B7:44 [C] ✔
D:47 [GLN] 9:3041 [C] BJ:46 [GLN] B7:39 [C] ✔
D:47 [GLN] 9:3042 [C] BJ:46 [GLN] B7:40 [U] ✔
D:72 [LYS] 9:3041 [C] BJ:71 [HIS] B7:39 [C] ✔
D:49 [PRO] 9:3041 [C] BJ:48 [PRO] B7:39 [C] ✔
D:149 [ARG] 9:3058 [G] BJ:149 [GLY] B7:56 [G] ✔
D:140 [ARG] 9:3029 [C] BJ:140 [SER] B7:28 [C] ✔
D:140 [ARG] 9:3030 [C] BJ:140 [SER] B7:29 [C] ✔
D:140 [ARG] 9:3044 [A] BJ:140 [SER] B7:42 [A] ✔
D:140 [ARG] 9:3045 [A] BJ:140 [SER] B7:43 [U] ✔
D:48 [MET] 9:3041 [C] BJ:47 [THR] B7:39 [C] ✔
D:147 [ALA] 9:3058 [G] BJ:147 [ARG] B7:56 [G] ✔
D:138 [GLY] 9:3029 [C] BJ:138 [GLY] B7:28 [C] ✔
D:138 [GLY] 9:3030 [C] BJ:138 [GLY] B7:29 [C] ✔
D:138 [GLY] 9:3056 [A] BJ:138 [GLY] B7:54 [A] ✔
D:138 [GLY] 9:3057 [A] BJ:138 [GLY] B7:55 [A] ✔
D:146 [LYS] 9:3046 [C] BJ:146 [ARG] B7:44 [C] ✔
D:17 [ARG] 9:3030 [C] BJ:16 [ARG] B7:29 [C] ✔
D:17 [ARG] 9:3031 [C] BJ:16 [ARG] B7:30 [C] ✔
D:144 [ARG] 9:3028 [U] BJ:144 [LYS] B7:27 [G] ✔
D:144 [ARG] 9:3029 [C] BJ:144 [LYS] B7:28 [C] ✔
D:144 [ARG] 9:3045 [A] BJ:144 [LYS] B7:43 [U] ✔
D:144 [ARG] 9:3046 [C] BJ:144 [LYS] B7:44 [C] ✔
D:74 [THR] 9:3041 [C] BJ:73 [THR] B7:39 [C] ✔
D:74 [THR] 9:3042 [C] BJ:73 [THR] B7:40 [U] ✔
D:155 [HIS] 9:3056 [A] BJ:155 [HIS] B7:54 [A] ✔
D:155 [HIS] 9:3057 [A] BJ:155 [HIS] B7:55 [A] ✔
D:141 [VAL] 9:3029 [C] BJ:141 [ILE] B7:28 [C] ✔
D:141 [VAL] 9:3057 [A] BJ:141 [ILE] B7:55 [A] ✔
D:141 [VAL] 9:3058 [G] BJ:141 [ILE] B7:56 [G] ✔
D:139 [TYR] 9:3029 [C] BJ:139 [PHE] B7:28 [C] ✔
D:139 [TYR] 9:3030 [C] BJ:139 [PHE] B7:29 [C] ✔
D:143 [LYS] 9:3044 [A] BJ:143 [ASP] B7:42 [A] ✔
D:143 [LYS] 9:3045 [A] BJ:143 [ASP] B7:43 [U] ✔
D:13 [MET] 9:3029 [C] BJ:12 [MET] B7:28 [C] ✔
D:13 [MET] 9:3030 [C] BJ:12 [MET] B7:29 [C] ✔
D:13 [MET] 9:3053 [G] BJ:12 [MET] B7:51 [G] ✔
D:13 [MET] 9:3054 [A] BJ:12 [MET] B7:52 [C] ✔
D:13 [MET] 9:3056 [A] BJ:12 [MET] B7:54 [A] ✔
D:152 [PRO] 9:3057 [A] BJ:152 [GLY] B7:55 [A] ✔
D:152 [PRO] 9:3058 [G] BJ:152 [GLY] B7:56 [G] ✔
D:154 [LYS] 9:3017 [G] BJ:154 [LYS] B7:17 [C] ❌ 7O7Y_BJ_B7
D:149 [ARG] 9:3059 [C] BJ:149 [GLY] B7:57 [C] ❌ 7O7Y_BJ_B7
D:140 [ARG] 9:3046 [C] BJ:140 [SER] B7:44 [C] ❌ 7O7Y_BJ_B7
D:144 [ARG] 9:3058 [G] BJ:144 [LYS] B7:56 [G] ❌ 7O7Y_BJ_B7
D:143 [LYS] 9:3046 [C] BJ:143 [ASP] B7:44 [C] ❌ 7O7Y_BJ_B7
D:146 [LYS] 9:3028 [U] BJ:146 [ARG] B7:27 [G] ❌ 1VQ8_D_9
D:147 [ALA] 9:3059 [C] BJ:147 [ARG] B7:57 [C] ❌ 1VQ8_D_9
D:151 [ILE] 9:3058 [G] BJ:151 [ILE] B7:56 [G] ❌ 1VQ8_D_9
D:153 [THR] 9:3018 [U] BJ:153 [ALA] B7:18 [C] ❌ 1VQ8_D_9
D:154 [LYS] 9:3056 [A] BJ:154 [LYS] B7:54 [A] ❌ 1VQ8_D_9
D:154 [LYS] 9:3057 [A] BJ:154 [LYS] B7:55 [A] ❌ 1VQ8_D_9
D:154 [LYS] 9:3016 [G] BJ:154 [LYS] B7:16 [A] ❌ 7O7Y_B7:16 no longer at interface
D:146 [LYS] 9:3047 [A] BJ:146 [ARG] B7:45 [U] ❌ 7O7Y_B7:45 no longer at interface
D:146 [LYS] 9:3005 [G] BJ:146 [ARG] B7:5 [A] ❌ 1VQ8_9:3005 no longer at interface
D:146 [LYS] 9:3027 [C] BJ:146 [ARG] B7:26 [C] ❌ 1VQ8_9:3027 no longer at interface
D:147 [ALA] 9:3027 [C] BJ:147 [ARG] B7:26 [C] ❌ 1VQ8_9:3027 no longer at interface
D:147 [ALA] 9:3005 [G] BJ:147 [ARG] B7:5 [A] ❌ 1VQ8_9:3005 no longer at interface
D:147 [ALA] 9:3004 [G] BJ:147 [ARG] B7:4 [U] ❌ 1VQ8_9:3004 no longer at interface
D:154 [LYS] 9:3019 [G] BJ:154 [LYS] B7:19 [C] ❌ 1VQ8_9:3019 no longer at interface
D:77 [ASP] 9:3044 [A] BJ:76 [GLY] B7:42 [A] ❌ 7O7Y_BJ:76 no longer at interface
D:10 [PHE] 9:3054 [A] BJ:9 [GLU] B7:52 [C] ❌ 7O7Y_BJ:9 no longer at interface
D:10 [PHE] 9:3055 [U] BJ:9 [GLU] B7:53 [U] ❌ 7O7Y_BJ:9 no longer at interface
D:10 [PHE] 9:3056 [A] BJ:9 [GLU] B7:54 [A] ❌ 7O7Y_BJ:9 no longer at interface
D:11 [HIS] 9:3054 [A] BJ:10 [ASN] B7:52 [C] ❌ 1VQ8_D:11 no longer at interface
D:11 [HIS] 9:3055 [U] BJ:10 [ASN] B7:53 [U] ❌ 1VQ8_D:11 no longer at interface
D:11 [HIS] 9:3056 [A] BJ:10 [ASN] B7:54 [A] ❌ 1VQ8_D:11 no longer at interface
D:150 [SER] 9:3058 [G] BJ:150 [CYS] B7:56 [G] ❌ 1VQ8_D:150 no longer at interface
D:150 [SER] 9:3057 [A] BJ:150 [CYS] B7:55 [A] ❌ 1VQ8_D:150 no longer at interface
D:156 [ARG] 9:3017 [G] BJ:156 [ARG] B7:17 [C] ❌ 1VQ8_D:156 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 5S ribosomal RNA 0.92 0.93 0.39 0.92 0.83 0.91 0.86 0.75 0.77 0.24 0.62


Other pairs involving 1VQ8_D_9 or 7O7Y_BJ_B7

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_D_9 4Y4O_1G_1B 0.78 0.81 1.52 0.33 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 6AZ3_D_8 0.78 0.91 1.24 0.4 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 6S0Z_F_B 0.87 0.79 1.51 0.47 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 7ASM_F_B 0.52 0.78 1.79 0.45 Ribosomal protein L5 5S ribosomal RNA compare
6AZ3_D_8 7O7Y_BJ_B7 0.86 0.98 0.79 0.57 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 7O7Y_BJ_B7 0.75 0.92 0.93 0.39 Ribosomal protein L5 5S ribosomal RNA compare
7ASM_F_B 7O7Y_BJ_B7 0.64 0.81 1.22 0.36 Ribosomal protein L5 5S ribosomal RNA compare
1YHQ_D_9 7O7Y_BJ_B7 0.76 0.92 0.87 0.39 Ribosomal protein L5 5S ribosomal RNA compare
4Y4O_1G_1B 7O7Y_BJ_B7 0.86 0.79 1.41 0.28 Ribosomal protein L5 5S ribosomal RNA compare
6S0Z_F_B 7O7Y_BJ_B7 0.91 0.78 1.13 0.29 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 7RYG_F_B 0.81 0.76 1.39 0.59 Ribosomal protein L5 5S ribosomal RNA compare
7O7Y_BJ_B7 7RYG_F_B 0.97 0.76 1.11 0.47 Ribosomal protein L5 5S ribosomal RNA compare