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All interfaces > All interologs > Interface groups > group116 > 6AZ3_D_8 vs 6S0Z_F_B

Interface analysis


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Common contacts -

6AZ3_D
6AZ3_8
6S0Z_F
6S0Z_B
Conserved?
D:9 [ASN] 8:54 [U] F:24 [SER] B:53 [U] ✔
D:9 [ASN] 8:55 [U] F:24 [SER] B:54 [U] ✔
D:9 [ASN] 8:56 [A] F:24 [SER] B:55 [A] ✔
D:48 [VAL] 8:41 [C] F:66 [LEU] B:40 [C] ✔
D:47 [PRO] 8:41 [C] F:65 [PRO] B:40 [C] ✔
D:10 [PRO] 8:54 [U] F:25 [VAL] B:53 [U] ✔
D:11 [MET] 8:31 [C] F:26 [MET] B:29 [C] ✔
D:11 [MET] 8:53 [G] F:26 [MET] B:52 [G] ✔
D:11 [MET] 8:54 [U] F:26 [MET] B:53 [U] ✔
D:11 [MET] 8:56 [A] F:26 [MET] B:55 [A] ✔
D:45 [GLN] 8:41 [C] F:63 [GLN] B:40 [C] ✔
D:45 [GLN] 8:42 [C] F:63 [GLN] B:41 [C] ✔
D:72 [THR] 8:41 [C] F:90 [THR] B:40 [C] ✔
D:72 [THR] 8:42 [C] F:90 [THR] B:41 [C] ✔
D:46 [THR] 8:41 [C] F:64 [LYS] B:40 [C] ✔
D:74 [ARG] 8:42 [C] F:92 [ARG] B:41 [C] ✔
D:74 [ARG] 8:44 [A] F:92 [ARG] B:43 [A] ✔
D:12 [ARG] 8:56 [A] F:27 [GLU] B:55 [A] ✔
D:71 [CYS] 8:41 [C] F:89 [VAL] B:40 [C] ✔
D:70 [HIS] 8:41 [C] F:88 [LYS] B:40 [C] ✔
D:10 [PRO] 8:53 [G] F:25 [VAL] B:52 [G] ❌ 6AZ3_D_8
D:74 [ARG] 8:41 [C] F:92 [ARG] B:40 [C] ❌ 6AZ3_D_8
D:11 [MET] 8:30 [C] F:26 [MET] B:28 [C] ❌ 6S0Z_B:28 no longer at interface
D:76 [LYS] 8:34 [A] F:94 [GLU] B:32 [U] ❌ 6AZ3_D:76, 6AZ3_8:34 no longer at interface
D:76 [LYS] 8:33 [U] F:94 [GLU] B:31 [G] ❌ 6AZ3_D:76, 6AZ3_8:33 no longer at interface
D:17 [LYS] 8:31 [C] F:32 [ASP] B:29 [C] ❌ 6S0Z_F:32 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 5S ribosomal RNA 0.79 1.18 0.29 0.73 0.77 0.71 0.73 0.96 0.96 0.33 0.67


Other pairs involving 6AZ3_D_8 or 6S0Z_F_B

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_D_9 6AZ3_D_8 0.78 0.91 1.24 0.4 Ribosomal protein L5 5S ribosomal RNA compare
1YHQ_D_9 6AZ3_D_8 0.79 0.91 1.17 0.4 Ribosomal protein L5 5S ribosomal RNA compare
4Y4O_1G_1B 6AZ3_D_8 0.89 0.8 1.42 0.28 Ribosomal protein L5 5S ribosomal RNA compare
6AZ3_D_8 6S0Z_F_B 0.96 0.79 1.18 0.29 Ribosomal protein L5 5S ribosomal RNA compare
1VQ8_D_9 6S0Z_F_B 0.87 0.79 1.51 0.47 Ribosomal protein L5 5S ribosomal RNA compare
1YHQ_D_9 6S0Z_F_B 0.87 0.79 1.43 0.47 Ribosomal protein L5 5S ribosomal RNA compare
4Y4O_1G_1B 6S0Z_F_B 0.87 0.92 0.97 0.53 Ribosomal protein L5 5S ribosomal RNA compare
6AZ3_D_8 7ASM_F_B 0.71 0.81 1.32 0.36 Ribosomal protein L5 5S ribosomal RNA compare
6S0Z_F_B 7ASM_F_B 0.65 0.96 1.26 0.91 Ribosomal protein L5 5S ribosomal RNA compare
6AZ3_D_8 7O7Y_BJ_B7 0.86 0.98 0.79 0.57 Ribosomal protein L5 5S ribosomal RNA compare
6S0Z_F_B 7O7Y_BJ_B7 0.91 0.78 1.13 0.29 Ribosomal protein L5 5S ribosomal RNA compare
6AZ3_D_8 7RYG_F_B 0.97 0.78 0.92 0.41 Ribosomal protein L5 5S ribosomal RNA compare
6S0Z_F_B 7RYG_F_B 0.93 0.9 0.9 0.6 Ribosomal protein L5 5S ribosomal RNA compare