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All interfaces > All interologs > Interface groups > group117 > 1YHQ_V_0 vs 7O7Y_Bh_B8

Interface analysis


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Common contacts -

1YHQ_V
1YHQ_0
7O7Y_Bh
7O7Y_B8
Conserved?
V:50 [ARG] 0:55 [U] Bh:51 [ARG] B8:47 [C] ✔
V:50 [ARG] 0:56 [G] Bh:51 [ARG] B8:48 [A] ✔
V:50 [ARG] 0:57 [C] Bh:51 [ARG] B8:49 [G] ✔
V:50 [ARG] 0:69 [A] Bh:51 [ARG] B8:61 [A] ✔
V:50 [ARG] 0:70 [A] Bh:51 [ARG] B8:62 [A] ✔
V:54 [ALA] 0:68 [U] Bh:55 [ALA] B8:60 [G] ✔
V:54 [ALA] 0:69 [A] Bh:55 [ALA] B8:61 [A] ✔
V:54 [ALA] 0:72 [C] Bh:55 [ALA] B8:64 [U] ✔
V:6 [GLN] 0:96 [A] Bh:7 [ARG] B8:86 [U] ✔
V:2 [VAL] 0:93 [C] Bh:3 [LYS] B8:82 [A] ✔
V:57 [LYS] 0:68 [U] Bh:58 [LEU] B8:60 [G] ✔
V:44 [GLY] 0:91 [G] Bh:45 [SER] B8:78 [G] ✔
V:55 [ARG] 0:72 [C] Bh:56 [ARG] B8:64 [U] ✔
V:55 [ARG] 0:73 [U] Bh:56 [ARG] B8:65 [A] ✔
V:48 [GLU] 0:93 [C] Bh:49 [VAL] B8:82 [A] ✔
V:9 [ARG] 0:73 [U] Bh:10 [ARG] B8:65 [A] ✔
V:9 [ARG] 0:74 [G] Bh:10 [ARG] B8:66 [A] ✔
V:34 [GLN] 0:57 [C] Bh:35 [LYS] B8:49 [G] ✔
V:34 [GLN] 0:58 [C] Bh:35 [LYS] B8:50 [C] ✔
V:47 [LYS] 0:57 [C] Bh:48 [ARG] B8:49 [G] ✔
V:62 [GLU] 0:73 [U] Bh:63 [GLN] B8:65 [A] ✔
V:53 [ILE] 0:68 [U] Bh:54 [ILE] B8:60 [G] ✔
V:4 [HIS] 0:96 [A] Bh:5 [LYS] B8:86 [U] ✔
V:1 [THR] 0:93 [C] Bh:2 [ALA] B8:82 [A] ✔
V:5 [VAL] 0:73 [U] Bh:6 [ALA] B8:65 [A] ✔
V:5 [VAL] 0:74 [G] Bh:6 [ALA] B8:66 [A] ✔
V:51 [LYS] 0:69 [A] Bh:52 [LYS] B8:61 [A] ✔
V:51 [LYS] 0:71 [G] Bh:52 [LYS] B8:63 [U] ✔
V:51 [LYS] 0:72 [C] Bh:52 [LYS] B8:64 [U] ✔
V:58 [THR] 0:68 [U] Bh:59 [THR] B8:60 [G] ✔
V:58 [THR] 0:72 [C] Bh:59 [THR] B8:64 [U] ✔
V:58 [THR] 0:73 [U] Bh:59 [THR] B8:65 [A] ✔
V:58 [THR] 0:105 [G] Bh:59 [THR] B8:95 [A] ✔
V:58 [THR] 0:106 [A] Bh:59 [THR] B8:96 [C] ✔
V:43 [PRO] 0:57 [C] Bh:44 [LEU] B8:49 [G] ✔
V:42 [ASN] 0:91 [G] Bh:42 [SER] B8:78 [G] ✔
V:42 [ASN] 0:92 [G] Bh:42 [SER] B8:79 [G] ✔
V:46 [ILE] 0:57 [C] Bh:47 [ILE] B8:49 [G] ✔
V:50 [ARG] 0:68 [U] Bh:51 [ARG] B8:60 [G] ❌ 7O7Y_Bh_B8
V:2 [VAL] 0:96 [A] Bh:3 [LYS] B8:86 [U] ❌ 7O7Y_Bh_B8
V:44 [GLY] 0:92 [G] Bh:45 [SER] B8:79 [G] ❌ 7O7Y_Bh_B8
V:48 [GLU] 0:92 [G] Bh:49 [VAL] B8:79 [G] ❌ 7O7Y_Bh_B8
V:41 [GLU] 0:57 [C] Bh:41 [ALA] B8:49 [G] ❌ 7O7Y_Bh_B8
V:4 [HIS] 0:94 [G] Bh:5 [LYS] B8:84 [A] ❌ 7O7Y_Bh_B8
V:1 [THR] 0:92 [G] Bh:2 [ALA] B8:79 [G] ❌ 7O7Y_Bh_B8
V:1 [THR] 0:94 [G] Bh:2 [ALA] B8:84 [A] ❌ 7O7Y_Bh_B8
V:43 [PRO] 0:90 [A] Bh:44 [LEU] B8:77 [A] ❌ 7O7Y_Bh_B8
V:43 [PRO] 0:91 [G] Bh:44 [LEU] B8:78 [G] ❌ 7O7Y_Bh_B8
V:2 [VAL] 0:94 [G] Bh:3 [LYS] B8:84 [A] ❌ 1YHQ_V_0
V:41 [GLU] 0:90 [A] Bh:41 [ALA] B8:77 [A] ❌ 1YHQ_V_0
V:41 [GLU] 0:91 [G] Bh:41 [ALA] B8:78 [G] ❌ 1YHQ_V_0
V:42 [ASN] 0:93 [C] Bh:42 [SER] B8:82 [A] ❌ 1YHQ_V_0
V:44 [GLY] 0:93 [C] Bh:45 [SER] B8:82 [A] ❌ 1YHQ_V_0
V:44 [GLY] 0:57 [C] Bh:45 [SER] B8:49 [G] ❌ 1YHQ_V_0
V:44 [GLY] 0:90 [A] Bh:45 [SER] B8:77 [A] ❌ 1YHQ_V_0
V:47 [LYS] 0:56 [G] Bh:48 [ARG] B8:48 [A] ❌ 1YHQ_V_0
V:51 [LYS] 0:70 [A] Bh:52 [LYS] B8:62 [A] ❌ 1YHQ_V_0
V:62 [GLU] 0:106 [A] Bh:63 [GLN] B8:96 [C] ❌ 1YHQ_V_0
V:62 [GLU] 0:105 [G] Bh:63 [GLN] B8:95 [A] ❌ 1YHQ_V_0
V:6 [GLN] 0:74 [G] Bh:7 [ARG] B8:66 [A] ❌ 1YHQ_V_0
V:4 [HIS] 0:95 [A] Bh:5 [LYS] B8:85 [U] ❌ 7O7Y_B8:85 no longer at interface
V:4 [HIS] 0:97 [G] Bh:5 [LYS] B8:87 [G] ❌ 1YHQ_0:97 no longer at interface
V:61 [GLY] 0:107 [U] Bh:62 [ASN] B8:97 [A] ❌ 1YHQ_V:61, 1YHQ_0:107 no longer at interface
V:65 [ASP] 0:107 [U] Bh:66 [LYS] B8:97 [A] ❌ 1YHQ_V:65, 1YHQ_0:107 no longer at interface
V:6 [GLN] 0:97 [G] Bh:7 [ARG] B8:87 [G] ❌ 1YHQ_0:97 no longer at interface
V:7 [GLU] 0:96 [A] Bh:8 [ASP] B8:86 [U] ❌ 7O7Y_Bh:8 no longer at interface
V:59 [ILE] 0:73 [U] Bh:60 [VAL] B8:65 [A] ❌ 7O7Y_Bh:60 no longer at interface
V:45 [ARG] 0:93 [C] Bh:46 [LYS] B8:82 [A] ❌ 1YHQ_V:45 no longer at interface
V:61 [GLY] 0:68 [U] Bh:62 [ASN] B8:60 [G] ❌ 1YHQ_V:61 no longer at interface
V:61 [GLY] 0:106 [A] Bh:62 [ASN] B8:96 [C] ❌ 1YHQ_V:61 no longer at interface
V:65 [ASP] 0:106 [A] Bh:66 [LYS] B8:96 [C] ❌ 1YHQ_V:65 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L29 (L29p) 0.63 2.24 0.29 0.86 0.7 0.92 0.9 0.59 0.44 0.14 0.33


Other pairs involving 1YHQ_V_0 or 7O7Y_Bh_B8

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_V_0 1YHQ_V_0 0.99 1.0 0.27 0.9 Ribosomal protein L29 (L29p) Archaeal large subunit ribosomal RNA compare
1VQ8_V_0 7O7Y_Bh_B8 0.59 0.63 2.19 0.33 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 6AZ3_a_7 0.59 0.61 1.93 0.38 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 4Y4O_12_1A 0.63 0.93 2.13 0.25 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 7K00_x_a 0.71 0.91 2.22 0.39 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 7RYG_X_A 0.46 0.92 3.85 0.41 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 6S0Z_W_A 0.71 0.93 2.68 0.58 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 7O7Y_Bh_B8 0.59 0.63 2.24 0.29 Ribosomal protein L29 (L29p) compare
4Y4O_12_1A 7O7Y_Bh_B8 0.60 0.67 2.56 0.29 Ribosomal protein L29 (L29p) compare
6AZ3_a_7 7O7Y_Bh_B8 0.82 0.94 0.94 0.5 Ribosomal protein L29 (L29p) 5.8S ribosomal RNA compare
6S0Z_W_A 7O7Y_Bh_B8 0.63 0.7 1.77 0.2 Ribosomal protein L29 (L29p) compare
7O7Y_Bh_B8 7RYG_X_A 0.60 0.65 2.11 0.12 Ribosomal protein L29 (L29p) compare