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All interfaces > All interologs > Interface groups > group117 > 4Y4O_12_1A vs 7O7Y_Bh_B8

Interface analysis


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Common contacts -

4Y4O_12
4Y4O_1A
7O7Y_Bh
7O7Y_B8
Conserved?
12:69 [ARG] 1A:109 [A] Bh:66 [LYS] B8:96 [C] ✔
12:39 [ALA] 1A:60 [G] Bh:35 [LYS] B8:49 [G] ✔
12:58 [ALA] 1A:71 [U] Bh:55 [ALA] B8:60 [G] ✔
12:58 [ALA] 1A:72 [A] Bh:55 [ALA] B8:61 [A] ✔
12:58 [ALA] 1A:75 [C] Bh:55 [ALA] B8:64 [U] ✔
12:51 [ARG] 1A:59 [G] Bh:48 [ARG] B8:48 [A] ✔
12:51 [ARG] 1A:60 [G] Bh:48 [ARG] B8:49 [G] ✔
12:66 [GLU] 1A:76 [C] Bh:63 [GLN] B8:65 [A] ✔
12:55 [ARG] 1A:72 [A] Bh:52 [LYS] B8:61 [A] ✔
12:55 [ARG] 1A:73 [A] Bh:52 [LYS] B8:62 [A] ✔
12:55 [ARG] 1A:74 [G] Bh:52 [LYS] B8:63 [U] ✔
12:55 [ARG] 1A:75 [C] Bh:52 [LYS] B8:64 [U] ✔
12:61 [LEU] 1A:71 [U] Bh:58 [LEU] B8:60 [G] ✔
12:59 [ARG] 1A:75 [C] Bh:56 [ARG] B8:64 [U] ✔
12:59 [ARG] 1A:76 [C] Bh:56 [ARG] B8:65 [A] ✔
12:10 [LEU] 1A:77 [A] Bh:7 [ARG] B8:66 [A] ✔
12:48 [HIS] 1A:95 [G] Bh:45 [SER] B8:82 [A] ✔
12:54 [LYS] 1A:59 [G] Bh:51 [ARG] B8:48 [A] ✔
12:54 [LYS] 1A:60 [G] Bh:51 [ARG] B8:49 [G] ✔
12:54 [LYS] 1A:72 [A] Bh:51 [ARG] B8:61 [A] ✔
12:54 [LYS] 1A:73 [A] Bh:51 [ARG] B8:62 [A] ✔
12:62 [THR] 1A:71 [U] Bh:59 [THR] B8:60 [G] ✔
12:62 [THR] 1A:75 [C] Bh:59 [THR] B8:64 [U] ✔
12:62 [THR] 1A:76 [C] Bh:59 [THR] B8:65 [A] ✔
12:62 [THR] 1A:108 [G] Bh:59 [THR] B8:95 [A] ✔
12:62 [THR] 1A:109 [A] Bh:59 [THR] B8:96 [C] ✔
12:50 [ILE] 1A:60 [G] Bh:47 [ILE] B8:49 [G] ✔
12:57 [ILE] 1A:71 [U] Bh:54 [ILE] B8:60 [G] ✔
12:1 [MET] 1A:95 [G] Bh:2 [ALA] B8:82 [A] ✔
12:47 [ASN] 1A:60 [G] Bh:44 [LEU] B8:49 [G] ✔
12:45 [SER] 1A:93 [G] Bh:41 [ALA] B8:78 [G] ✔
12:52 [ASP] 1A:95 [G] Bh:49 [VAL] B8:82 [A] ✔
12:65 [ASN] 1A:71 [U] Bh:62 [ASN] B8:60 [G] ✔
12:65 [ASN] 1A:109 [A] Bh:62 [ASN] B8:96 [C] ✔
12:65 [ASN] 1A:110 [U] Bh:62 [ASN] B8:97 [A] ✔
12:7 [ARG] 1A:99 [G] Bh:5 [LYS] B8:86 [U] ✔
12:7 [ARG] 1A:100 [G] Bh:5 [LYS] B8:87 [G] ✔
12:46 [GLN] 1A:93 [G] Bh:42 [SER] B8:78 [G] ✔
12:46 [GLN] 1A:94 [G] Bh:42 [SER] B8:79 [G] ✔
12:46 [GLN] 1A:95 [G] Bh:42 [SER] B8:82 [A] ✔
12:69 [ARG] 1A:108 [G] Bh:66 [LYS] B8:95 [A] ❌ 7O7Y_Bh_B8
12:10 [LEU] 1A:76 [C] Bh:7 [ARG] B8:65 [A] ❌ 7O7Y_Bh_B8
12:48 [HIS] 1A:94 [G] Bh:45 [SER] B8:79 [G] ❌ 7O7Y_Bh_B8
12:54 [LYS] 1A:71 [U] Bh:51 [ARG] B8:60 [G] ❌ 7O7Y_Bh_B8
12:1 [MET] 1A:96 [C] Bh:2 [ALA] B8:83 [C] ❌ 7O7Y_Bh_B8
12:1 [MET] 1A:97 [G] Bh:2 [ALA] B8:84 [A] ❌ 7O7Y_Bh_B8
12:47 [ASN] 1A:93 [G] Bh:44 [LEU] B8:78 [G] ❌ 7O7Y_Bh_B8
12:47 [ASN] 1A:94 [G] Bh:44 [LEU] B8:79 [G] ❌ 7O7Y_Bh_B8
12:45 [SER] 1A:94 [G] Bh:41 [ALA] B8:79 [G] ❌ 7O7Y_Bh_B8
12:48 [HIS] 1A:60 [G] Bh:45 [SER] B8:49 [G] ❌ 4Y4O_12_1A
12:48 [HIS] 1A:93 [G] Bh:45 [SER] B8:78 [G] ❌ 4Y4O_12_1A
12:66 [GLU] 1A:109 [A] Bh:63 [GLN] B8:96 [C] ❌ 4Y4O_12_1A
12:66 [GLU] 1A:108 [G] Bh:63 [GLN] B8:95 [A] ❌ 4Y4O_12_1A
12:69 [ARG] 1A:110 [U] Bh:66 [LYS] B8:97 [A] ❌ 4Y4O_12_1A
12:10 [LEU] 1A:99 [G] Bh:7 [ARG] B8:86 [U] ❌ 4Y4O_12_1A
12:10 [LEU] 1A:100 [G] Bh:7 [ARG] B8:87 [G] ❌ 4Y4O_12_1A
12:29 [LYS] 1A:70 [A] Bh:25 [LYS] B8:59 [A] ❌ 7O7Y_Bh:25, 7O7Y_B8:59 no longer at interface
12:39 [ALA] 1A:61 [C] Bh:35 [LYS] B8:50 [C] ❌ 4Y4O_1A:61 no longer at interface
12:45 [SER] 1A:92 [C] Bh:41 [ALA] B8:77 [A] ❌ 4Y4O_1A:92 no longer at interface
12:48 [HIS] 1A:92 [C] Bh:45 [SER] B8:77 [A] ❌ 4Y4O_1A:92 no longer at interface
12:54 [LYS] 1A:58 [U] Bh:51 [ARG] B8:47 [C] ❌ 4Y4O_1A:58 no longer at interface
12:6 [VAL] 1A:76 [C] Bh:4 [ILE] B8:65 [A] ❌ 7O7Y_Bh:4 no longer at interface
12:14 [ARG] 1A:76 [C] Bh:11 [GLY] B8:65 [A] ❌ 7O7Y_Bh:11 no longer at interface
12:14 [ARG] 1A:77 [A] Bh:11 [GLY] B8:66 [A] ❌ 7O7Y_Bh:11 no longer at interface
12:44 [LEU] 1A:93 [G] Bh:40 [ALA] B8:78 [G] ❌ 7O7Y_Bh:40 no longer at interface
12:29 [LYS] 1A:71 [U] Bh:25 [LYS] B8:60 [G] ❌ 7O7Y_Bh:25 no longer at interface
12:13 [ALA] 1A:77 [A] Bh:10 [ARG] B8:66 [A] ❌ 4Y4O_12:13 no longer at interface
12:13 [ALA] 1A:76 [C] Bh:10 [ARG] B8:65 [A] ❌ 4Y4O_12:13 no longer at interface
12:5 [GLU] 1A:96 [C] Bh:3 [LYS] B8:83 [C] ❌ 4Y4O_12:5 no longer at interface
12:5 [GLU] 1A:95 [G] Bh:3 [LYS] B8:82 [A] ❌ 4Y4O_12:5 no longer at interface
12:5 [GLU] 1A:97 [G] Bh:3 [LYS] B8:84 [A] ❌ 4Y4O_12:5 no longer at interface
12:49 [LYS] 1A:95 [G] Bh:46 [LYS] B8:82 [A] ❌ 4Y4O_12:49 no longer at interface
12:9 [GLN] 1A:77 [A] Bh:6 [ALA] B8:66 [A] ❌ 4Y4O_12:9 no longer at interface
12:9 [GLN] 1A:76 [C] Bh:6 [ALA] B8:65 [A] ❌ 4Y4O_12:9 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L29 (L29p) 0.67 2.56 0.29 0.81 0.75 0.75 0.83 0.60 0.51 0.23 0.53


Other pairs involving 4Y4O_12_1A or 7O7Y_Bh_B8

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_V_0 4Y4O_12_1A 0.61 0.93 2.21 0.25 Ribosomal protein L29 (L29p) compare
1VQ8_V_0 7O7Y_Bh_B8 0.59 0.63 2.19 0.33 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 4Y4O_12_1A 0.63 0.93 2.13 0.25 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 7O7Y_Bh_B8 0.59 0.63 2.24 0.29 Ribosomal protein L29 (L29p) compare
4Y4O_12_1A 6AZ3_a_7 0.68 0.65 2.63 0.35 Ribosomal protein L29 (L29p) compare
4Y4O_12_1A 7RYG_X_A 0.59 0.96 3.18 0.35 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
4Y4O_12_1A 7O7Y_Bh_B8 0.60 0.67 2.56 0.29 Ribosomal protein L29 (L29p) compare
4Y4O_12_1A 6S0Z_W_A 0.88 0.96 2.09 0.42 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
4Y4O_12_1A 7K00_x_a 0.87 0.96 0.91 0.39 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
6AZ3_a_7 7O7Y_Bh_B8 0.82 0.94 0.94 0.5 Ribosomal protein L29 (L29p) 5.8S ribosomal RNA compare
6S0Z_W_A 7O7Y_Bh_B8 0.63 0.7 1.77 0.2 Ribosomal protein L29 (L29p) compare
7O7Y_Bh_B8 7RYG_X_A 0.60 0.65 2.11 0.12 Ribosomal protein L29 (L29p) compare