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All interfaces > All interologs > Interface groups > group117 > 6S0Z_W_A vs 7K00_x_a

Interface analysis


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Common contacts -

6S0Z_W
6S0Z_A
7K00_x
7K00_a
Conserved?
W:43 [ILE] A:61 [A] x:43 [LEU] a:61 [C] ✔
W:39 [GLU] A:95 [A] x:39 [GLN] a:95 [A] ✔
W:39 [GLU] A:96 [G] x:39 [GLN] a:96 [C] ✔
W:3 [ALA] A:77 [U] x:3 [ALA] a:77 [G] ✔
W:3 [ALA] A:78 [U] x:3 [ALA] a:78 [U] ✔
W:40 [THR] A:61 [A] x:40 [SER] a:61 [C] ✔
W:40 [THR] A:94 [A] x:40 [SER] a:94 [A] ✔
W:40 [THR] A:95 [A] x:40 [SER] a:95 [A] ✔
W:54 [LYS] A:72 [U] x:54 [LYS] a:72 [U] ✔
W:51 [ALA] A:72 [U] x:51 [ALA] a:72 [U] ✔
W:51 [ALA] A:73 [A] x:51 [ALA] a:73 [A] ✔
W:51 [ALA] A:76 [C] x:51 [ALA] a:76 [C] ✔
W:48 [LYS] A:73 [A] x:48 [ARG] a:73 [A] ✔
W:48 [LYS] A:74 [U] x:48 [ARG] a:74 [A] ✔
W:48 [LYS] A:75 [G] x:48 [ARG] a:75 [G] ✔
W:48 [LYS] A:76 [C] x:48 [ARG] a:76 [C] ✔
W:50 [ILE] A:72 [U] x:50 [VAL] a:72 [U] ✔
W:38 [GLU] A:94 [A] x:38 [GLN] a:94 [A] ✔
W:38 [GLU] A:95 [A] x:38 [GLN] a:95 [A] ✔
W:41 [ALA] A:95 [A] x:41 [HIS] a:95 [A] ✔
W:41 [ALA] A:96 [G] x:41 [HIS] a:96 [C] ✔
W:55 [THR] A:72 [U] x:55 [THR] a:72 [U] ✔
W:55 [THR] A:76 [C] x:55 [THR] a:76 [C] ✔
W:55 [THR] A:77 [U] x:55 [THR] a:77 [G] ✔
W:55 [THR] A:110 [A] x:55 [THR] a:111 [A] ✔
W:52 [ARG] A:76 [C] x:52 [ARG] a:76 [C] ✔
W:52 [ARG] A:77 [U] x:52 [ARG] a:77 [G] ✔
W:58 [ARG] A:72 [U] x:58 [ASN] a:72 [U] ✔
W:58 [ARG] A:110 [A] x:58 [ASN] a:111 [A] ✔
W:58 [ARG] A:111 [U] x:58 [ASN] a:112 [U] ✔
W:7 [ARG] A:77 [U] x:7 [ARG] a:77 [G] ✔
W:7 [ARG] A:78 [U] x:7 [ARG] a:78 [U] ✔
W:47 [ARG] A:60 [U] x:47 [ARG] a:60 [G] ✔
W:47 [ARG] A:61 [A] x:47 [ARG] a:61 [C] ✔
W:47 [ARG] A:73 [A] x:47 [ARG] a:73 [A] ✔
W:47 [ARG] A:74 [U] x:47 [ARG] a:74 [A] ✔
W:44 [ARG] A:61 [A] x:44 [LYS] a:61 [C] ✔
W:59 [GLU] A:77 [U] x:59 [GLU] a:77 [G] ✔
W:47 [ARG] A:72 [U] x:47 [ARG] a:72 [U] ❌ 7K00_x_a
W:44 [ARG] A:74 [U] x:44 [LYS] a:74 [A] ❌ 7K00_x_a
W:44 [ARG] A:75 [G] x:44 [LYS] a:75 [G] ❌ 7K00_x_a
W:44 [ARG] A:76 [C] x:44 [LYS] a:76 [C] ❌ 7K00_x_a
W:47 [ARG] A:59 [U] x:47 [ARG] a:59 [U] ❌ 7K00_a:59 no longer at interface
W:2 [LYS] A:101 [G] x:2 [LYS] a:102 [U] ❌ 6S0Z_W:2, 6S0Z_A:101 no longer at interface
W:3 [ALA] A:101 [G] x:3 [ALA] a:102 [U] ❌ 6S0Z_A:101 no longer at interface
W:4 [LYS] A:101 [G] x:4 [LYS] a:102 [U] ❌ 6S0Z_W:4, 6S0Z_A:101 no longer at interface
W:44 [ARG] A:87 [U] x:44 [LYS] a:87 [U] ❌ 6S0Z_A:87 no longer at interface
W:45 [THR] A:97 [C] x:45 [GLN] a:97 [C] ❌ 6S0Z_W:45, 6S0Z_A:97 no longer at interface
W:5 [GLU] A:101 [G] x:5 [GLU] a:102 [U] ❌ 6S0Z_W:5, 6S0Z_A:101 no longer at interface
W:55 [THR] A:109 [G] x:55 [THR] a:110 [G] ❌ 6S0Z_A:109 no longer at interface
W:29 [ARG] A:60 [U] x:29 [ARG] a:60 [G] ❌ 7K00_x:29 no longer at interface
W:32 [LEU] A:61 [A] x:32 [ALA] a:61 [C] ❌ 7K00_x:32 no longer at interface
W:4 [LYS] A:78 [U] x:4 [LYS] a:78 [U] ❌ 6S0Z_W:4 no longer at interface
W:42 [ARG] A:95 [A] x:42 [LEU] a:95 [A] ❌ 6S0Z_W:42 no longer at interface
W:45 [THR] A:96 [G] x:45 [GLN] a:96 [C] ❌ 6S0Z_W:45 no longer at interface
W:65 [SER] A:111 [U] x:63 [ALA] a:112 [U] ❌ 6S0Z_W:65 no longer at interface
W:65 [SER] A:110 [A] x:63 [ALA] a:111 [A] ❌ 6S0Z_W:65 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA 0.97 1.52 0.42 0.9 0.97 0.89 0.93 0.86 0.81 0.27 0.79


Other pairs involving 6S0Z_W_A or 7K00_x_a

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_V_0 7K00_x_a 0.71 0.91 2.22 0.39 Ribosomal protein L29 (L29p) compare
1YHQ_V_0 6S0Z_W_A 0.71 0.93 2.68 0.58 Ribosomal protein L29 (L29p) compare
6S0Z_W_A 7RYG_X_A 0.86 0.98 2.21 0.53 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
6S0Z_W_A 7O7Y_Bh_B8 0.63 0.7 1.77 0.2 Ribosomal protein L29 (L29p) compare
6S0Z_W_A 7K00_x_a 0.86 0.97 1.52 0.42 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
6AZ3_a_7 6S0Z_W_A 0.69 0.68 1.53 0.4 Ribosomal protein L29 (L29p) compare
6AZ3_a_7 7K00_x_a 0.64 0.66 1.39 0.35 Ribosomal protein L29 (L29p) compare
4Y4O_12_1A 6S0Z_W_A 0.88 0.96 2.09 0.42 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
4Y4O_12_1A 7K00_x_a 0.87 0.96 0.91 0.39 Ribosomal protein L29 (L29p) Bacterial large subunit ribosomal RNA compare
1VQ8_V_0 7K00_x_a 0.69 0.91 2.39 0.39 Ribosomal protein L29 (L29p) compare
1VQ8_V_0 6S0Z_W_A 0.70 0.93 2.86 0.53 Ribosomal protein L29 (L29p) compare