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All interfaces > All interologs > Interface groups > group120 > 1JJ2_Y_0 vs 6AZ3_o_1,2

Interface analysis


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Common contacts -

1JJ2_Y
1JJ2_0
6AZ3_o
6AZ3_1,2
Conserved?
Y:11 [THR] 0:796 [A] o:11 [MET] 1:887 [A] ✔
Y:20 [LEU] 0:1771 [U] o:20 [ALA] 2:1891 [U] ✔
Y:20 [LEU] 0:1772 [C] o:20 [ALA] 2:1892 [C] ✔
Y:20 [LEU] 0:1886 [A] o:20 [ALA] 2:2217 [U] ✔
Y:10 [ARG] 0:796 [A] o:10 [VAL] 1:887 [A] ✔
Y:10 [ARG] 0:797 [A] o:10 [VAL] 1:888 [A] ✔
Y:21 [LYS] 0:1886 [A] o:21 [ASN] 2:2217 [U] ✔
Y:21 [LYS] 0:1887 [U] o:21 [ASN] 2:2218 [U] ✔
Y:23 [ARG] 0:1771 [U] o:23 [ARG] 2:1891 [U] ✔
Y:23 [ARG] 0:1772 [C] o:23 [ARG] 2:1892 [C] ✔
Y:23 [ARG] 0:1773 [G] o:23 [ARG] 2:1893 [G] ✔
Y:16 [PRO] 0:1773 [G] o:16 [THR] 2:1893 [G] ✔
Y:16 [PRO] 0:1774 [G] o:16 [THR] 2:1894 [C] ✔
Y:16 [PRO] 0:1829 [A] o:16 [THR] 2:2159 [A] ✔
Y:16 [PRO] 0:2018 [A] o:16 [THR] 2:2348 [A] ✔
Y:16 [PRO] 0:2019 [A] o:16 [THR] 2:2349 [A] ✔
Y:13 [ARG] 0:796 [A] o:13 [ARG] 1:887 [A] ✔
Y:13 [ARG] 0:818 [A] o:13 [ARG] 1:909 [A] ✔
Y:13 [ARG] 0:819 [A] o:13 [ARG] 1:910 [G] ✔
Y:13 [ARG] 0:820 [G] o:13 [ARG] 1:911 [G] ✔
Y:22 [ILE] 0:1885 [A] o:22 [PRO] 2:2216 [A] ✔
Y:18 [TYR] 0:820 [G] o:18 [TYR] 1:911 [G] ✔
Y:18 [TYR] 0:1829 [A] o:18 [TYR] 2:2159 [A] ✔
Y:18 [TYR] 0:1830 [C] o:18 [TYR] 2:2160 [C] ✔
Y:18 [TYR] 0:1885 [A] o:18 [TYR] 2:2216 [A] ✔
Y:15 [GLY] 0:1773 [G] o:15 [GLY] 2:1893 [G] ✔
Y:17 [ARG] 0:819 [A] o:17 [ARG] 1:910 [G] ✔
Y:17 [ARG] 0:820 [G] o:17 [ARG] 1:911 [G] ✔
Y:17 [ARG] 0:821 [U] o:17 [ARG] 1:912 [C] ✔
Y:17 [ARG] 0:1829 [A] o:17 [ARG] 2:2159 [A] ✔
Y:17 [ARG] 0:1830 [C] o:17 [ARG] 2:2160 [C] ✔
Y:14 [PHE] 0:819 [A] o:14 [TYR] 1:910 [G] ✔
Y:14 [PHE] 0:820 [G] o:14 [TYR] 1:911 [G] ✔
Y:19 [GLY] 0:1771 [U] o:19 [GLY] 2:1891 [U] ✔
Y:19 [GLY] 0:1829 [A] o:19 [GLY] 2:2159 [A] ✔
Y:19 [GLY] 0:1885 [A] o:19 [GLY] 2:2216 [A] ✔
Y:19 [GLY] 0:1886 [A] o:19 [GLY] 2:2217 [U] ✔
Y:12 [GLY] 0:796 [A] o:12 [GLY] 1:887 [A] ✔
Y:12 [GLY] 0:818 [A] o:12 [GLY] 1:909 [A] ✔
Y:12 [GLY] 0:1773 [G] o:12 [GLY] 2:1893 [G] ✔
Y:20 [LEU] 0:1887 [U] o:20 [ALA] 2:2218 [U] ❌ 6AZ3_o_1,2
Y:10 [ARG] 0:1772 [C] o:10 [VAL] 2:1892 [C] ❌ 6AZ3_o_1,2
Y:10 [ARG] 0:1773 [G] o:10 [VAL] 2:1893 [G] ❌ 6AZ3_o_1,2
Y:16 [PRO] 0:1771 [U] o:16 [THR] 2:1891 [U] ❌ 6AZ3_o_1,2
Y:22 [ILE] 0:1848 [G] o:22 [PRO] 2:2178 [G] ❌ 6AZ3_o_1,2
Y:18 [TYR] 0:1886 [A] o:18 [TYR] 2:2217 [U] ❌ 6AZ3_o_1,2
Y:22 [ILE] 0:1886 [A] o:22 [PRO] 2:2217 [U] ❌ 1JJ2_Y_0
Y:25 [ARG] 0:1887 [U] o:25 [ARG] 2:2218 [U] ❌ 1JJ2_Y_0
Y:25 [ARG] 0:1848 [G] o:25 [ARG] 2:2178 [G] ❌ 1JJ2_Y_0
Y:22 [ILE] 0:1847 [A] o:22 [PRO] 2:2177 [A] ❌ 6AZ3_2:395 no longer at interface
Y:25 [ARG] 0:1849 [G] o:25 [ARG] 2:2179 [G] ❌ 6AZ3_2:397 no longer at interface
Y:36 [LYS] 0:799 [C] o:36 [LYS] 1:890 [C] ❌ 6AZ3_o:36 no longer at interface
Y:34 [LYS] 0:797 [A] o:34 [HIS] 1:888 [A] ❌ 6AZ3_o:34 no longer at interface
Y:24 [VAL] 0:1772 [C] o:24 [LYS] 2:1892 [C] ❌ 1JJ2_Y:24 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related 0.79 1.06 0.27 0.9 0.79 0.5 0.59 0.89 0.75 0.29 0.36


Other pairs involving 1JJ2_Y_0 or 6AZ3_o_1,2

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4V9F_Z_0 6AZ3_o_1,2 0.87 0.8 1.14 0.33 Rubredoxin-related compare
1S72_Z_0 6AZ3_o_1,2 0.89 0.79 1.09 0.29 Rubredoxin-related compare
1JJ2_Y_0 1YHQ_Z_0 0.99 1.0 0.22 0.61 Rubredoxin-related Archaeal large subunit ribosomal RNA compare
1JJ2_Y_0 1S72_Z_0 0.99 1.0 0.13 0.61 Rubredoxin-related Archaeal large subunit ribosomal RNA compare
1JJ2_Y_0 3CC2_Z_0 0.99 1.0 0.23 0.57 Rubredoxin-related Archaeal large subunit ribosomal RNA compare
1JJ2_Y_0 6AZ3_o_1,2 0.89 0.79 1.06 0.27 Rubredoxin-related compare
1JJ2_Y_0 1VQ8_Z_0 0.99 1.0 0.31 0.59 Rubredoxin-related Archaeal large subunit ribosomal RNA compare
1JJ2_Y_0 6AZ3_o_3 0.41 0.71 1.86 0.0 Rubredoxin-related compare
1JJ2_Y_0 7O7Y_Bp_B5 0.78 0.94 2.04 0.47 Rubredoxin-related compare
1JJ2_Y_0 4V9F_Z_0 0.98 1.0 0.24 0.53 Rubredoxin-related Archaeal large subunit ribosomal RNA compare
1YHQ_Z_0 6AZ3_o_1,2 0.90 0.79 0.96 0.29 Rubredoxin-related compare
1VQ8_Z_0 6AZ3_o_1,2 0.88 0.79 1.05 0.26 Rubredoxin-related compare
3CC2_Z_0 6AZ3_o_1,2 0.90 0.79 1.01 0.29 Rubredoxin-related compare
6AZ3_o_1,2 7O7Y_Bp_B5 0.95 0.92 0.76 0.57 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare