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All interfaces > All interologs > Interface groups > group120 > 6AZ3_o_1,2 vs 7O7Y_Bp_B5

Interface analysis


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Common contacts -

6AZ3_o
6AZ3_1,2
7O7Y_Bp
7O7Y_B5
Conserved?
o:20 [ALA] 2:1891 [U] Bp:20 [ALA] B5:2717 [U] ✔
o:20 [ALA] 2:1892 [C] Bp:20 [ALA] B5:2718 [C] ✔
o:20 [ALA] 2:2217 [U] Bp:20 [ALA] B5:3425 [U] ✔
o:9 [GLY] 1:887 [A] Bp:9 [GLY] B5:1508 [A] ✔
o:9 [GLY] 1:888 [A] Bp:9 [GLY] B5:1509 [A] ✔
o:6 [VAL] 2:1892 [C] Bp:6 [LYS] B5:2718 [C] ✔
o:6 [VAL] 2:1893 [G] Bp:6 [LYS] B5:2719 [OMG] ✔
o:8 [MET] 2:1892 [C] Bp:8 [VAL] B5:2718 [C] ✔
o:8 [MET] 2:1893 [G] Bp:8 [VAL] B5:2719 [OMG] ✔
o:4 [ARG] 1:887 [A] Bp:4 [ARG] B5:1508 [A] ✔
o:4 [ARG] 1:888 [A] Bp:4 [ARG] B5:1509 [A] ✔
o:4 [ARG] 1:889 [G] Bp:4 [ARG] B5:1510 [G] ✔
o:4 [ARG] 1:890 [C] Bp:4 [ARG] B5:1511 [C] ✔
o:4 [ARG] 1:905 [G] Bp:4 [ARG] B5:1526 [G] ✔
o:4 [ARG] 1:906 [U] Bp:4 [ARG] B5:1527 [U] ✔
o:4 [ARG] 1:907 [G] Bp:4 [ARG] B5:1528 [G] ✔
o:4 [ARG] 2:1893 [G] Bp:4 [ARG] B5:2719 [OMG] ✔
o:3 [LYS] 1:901 [C] Bp:3 [LYS] B5:1522 [U] ✔
o:3 [LYS] 1:902 [C] Bp:3 [LYS] B5:1523 [C] ✔
o:3 [LYS] 1:903 [A] Bp:3 [LYS] B5:1524 [U] ✔
o:10 [VAL] 1:887 [A] Bp:10 [ILE] B5:1508 [A] ✔
o:10 [VAL] 1:888 [A] Bp:10 [ILE] B5:1509 [A] ✔
o:14 [TYR] 1:910 [G] Bp:14 [TYR] B5:1531 [G] ✔
o:14 [TYR] 1:911 [G] Bp:14 [TYR] B5:1532 [G] ✔
o:7 [LYS] 2:1892 [C] Bp:7 [LYS] B5:2718 [C] ✔
o:7 [LYS] 2:1893 [G] Bp:7 [LYS] B5:2719 [OMG] ✔
o:23 [ARG] 2:1891 [U] Bp:23 [ARG] B5:2717 [U] ✔
o:23 [ARG] 2:1892 [C] Bp:23 [ARG] B5:2718 [C] ✔
o:23 [ARG] 2:1893 [G] Bp:23 [ARG] B5:2719 [OMG] ✔
o:61 [SER] 2:2756 [U] Bp:61 [MET] B5:3849 [G] ✔
o:22 [PRO] 2:2216 [A] Bp:22 [LEU] B5:3424 [A] ✔
o:22 [PRO] 2:2217 [U] Bp:22 [LEU] B5:3425 [U] ✔
o:13 [ARG] 1:887 [A] Bp:13 [LYS] B5:1508 [A] ✔
o:13 [ARG] 1:909 [A] Bp:13 [LYS] B5:1530 [A] ✔
o:13 [ARG] 1:910 [G] Bp:13 [LYS] B5:1531 [G] ✔
o:13 [ARG] 1:911 [G] Bp:13 [LYS] B5:1532 [G] ✔
o:11 [MET] 1:887 [A] Bp:11 [VAL] B5:1508 [A] ✔
o:21 [ASN] 2:2217 [U] Bp:21 [SER] B5:3425 [U] ✔
o:21 [ASN] 2:2218 [U] Bp:21 [SER] B5:3426 [U] ✔
o:5 [THR] 1:887 [A] Bp:5 [THR] B5:1508 [A] ✔
o:5 [THR] 1:888 [A] Bp:5 [THR] B5:1509 [A] ✔
o:5 [THR] 2:1893 [G] Bp:5 [THR] B5:2719 [OMG] ✔
o:18 [TYR] 1:911 [G] Bp:18 [TYR] B5:1532 [G] ✔
o:18 [TYR] 2:2159 [A] Bp:18 [TYR] B5:3367 [A] ✔
o:18 [TYR] 2:2160 [C] Bp:18 [TYR] B5:3368 [C] ✔
o:18 [TYR] 2:2216 [A] Bp:18 [TYR] B5:3424 [A] ✔
o:15 [GLY] 2:1893 [G] Bp:15 [GLY] B5:2719 [OMG] ✔
o:62 [LYS] 2:2756 [U] Bp:62 [LYS] B5:3849 [G] ✔
o:17 [ARG] 1:910 [G] Bp:17 [ARG] B5:1531 [G] ✔
o:17 [ARG] 1:911 [G] Bp:17 [ARG] B5:1532 [G] ✔
o:17 [ARG] 1:912 [C] Bp:17 [ARG] B5:1533 [U] ✔
o:17 [ARG] 2:2159 [A] Bp:17 [ARG] B5:3367 [A] ✔
o:17 [ARG] 2:2160 [C] Bp:17 [ARG] B5:3368 [C] ✔
o:16 [THR] 2:1893 [G] Bp:16 [THR] B5:2719 [OMG] ✔
o:16 [THR] 2:1894 [C] Bp:16 [THR] B5:2720 [G] ✔
o:16 [THR] 2:2159 [A] Bp:16 [THR] B5:3367 [A] ✔
o:16 [THR] 2:2348 [A] Bp:16 [THR] B5:3556 [A] ✔
o:16 [THR] 2:2349 [A] Bp:16 [THR] B5:3557 [A2M] ✔
o:19 [GLY] 2:1891 [U] Bp:19 [GLY] B5:2717 [U] ✔
o:19 [GLY] 2:2159 [A] Bp:19 [GLY] B5:3367 [A] ✔
o:19 [GLY] 2:2216 [A] Bp:19 [GLY] B5:3424 [A] ✔
o:19 [GLY] 2:2217 [U] Bp:19 [GLY] B5:3425 [U] ✔
o:12 [GLY] 1:887 [A] Bp:12 [GLY] B5:1508 [A] ✔
o:12 [GLY] 1:909 [A] Bp:12 [GLY] B5:1530 [A] ✔
o:12 [GLY] 2:1893 [G] Bp:12 [GLY] B5:2719 [OMG] ✔
o:2 [ALA] 1:903 [A] Bp:2 [ALA] B5:1524 [U] ✔
o:2 [ALA] 1:904 [G] Bp:2 [ALA] B5:1525 [G] ✔
o:2 [ALA] 1:905 [G] Bp:2 [ALA] B5:1526 [G] ✔
o:8 [MET] 1:887 [A] Bp:8 [VAL] B5:1508 [A] ❌ 7O7Y_Bp_B5
o:8 [MET] 1:888 [A] Bp:8 [VAL] B5:1509 [A] ❌ 7O7Y_Bp_B5
o:16 [THR] 2:1891 [U] Bp:16 [THR] B5:2717 [U] ❌ 6AZ3_o_1,2
o:18 [TYR] 2:2217 [U] Bp:18 [TYR] B5:3425 [U] ❌ 6AZ3_o_1,2
o:22 [PRO] 2:2178 [G] Bp:22 [LEU] B5:3386 [G] ❌ 6AZ3_o_1,2
o:62 [LYS] 2:2755 [C] Bp:62 [LYS] B5:3848 [U] ❌ 7O7Y_B5:3848 no longer at interface
o:41 [PHE] 2:2754 [A] Bp:41 [PHE] B5:3847 [C] ❌ 7O7Y_B5:3847 no longer at interface
o:41 [PHE] 2:2755 [C] Bp:41 [PHE] B5:3848 [U] ❌ 7O7Y_B5:3848 no longer at interface
o:2 [ALA] 1:891 [C] Bp:2 [ALA] B5:1512 [C] ❌ 6AZ3_1:891 no longer at interface
o:22 [PRO] 2:2177 [A] Bp:22 [LEU] B5:3385 [A] ❌ 6AZ3_2:2177 no longer at interface
o:24 [LYS] 2:1892 [C] Bp:24 [LYS] B5:2718 [C] ❌ 7O7Y_Bp:24 no longer at interface
o:25 [ARG] 2:2178 [G] Bp:25 [MET] B5:3386 [G] ❌ 7O7Y_Bp:25 no longer at interface
o:25 [ARG] 2:2218 [U] Bp:25 [MET] B5:3426 [U] ❌ 7O7Y_Bp:25 no longer at interface
o:60 [CYS] 2:2756 [U] Bp:60 [CYS] B5:3849 [G] ❌ 6AZ3_o:60 no longer at interface
o:63 [THR] 2:2756 [U] Bp:63 [THR] B5:3849 [G] ❌ 6AZ3_o:63 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Rubredoxin-related Eukaryotic large subunit ribosomal RNA 0.92 0.76 0.57 0.94 0.92 0.83 0.88 0.95 0.91 0.75 0.67


Other pairs involving 6AZ3_o_1,2 or 7O7Y_Bp_B5

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_o_3 7O7Y_Bp_B5 0.68 0.92 1.02 0.23 Rubredoxin-related compare
4V9F_Z_0 7O7Y_Bp_B5 0.76 0.94 1.93 0.39 Rubredoxin-related compare
4V9F_Z_0 6AZ3_o_1,2 0.87 0.8 1.14 0.33 Rubredoxin-related compare
1S72_Z_0 7O7Y_Bp_B5 0.76 0.94 1.95 0.36 Rubredoxin-related compare
1S72_Z_0 6AZ3_o_1,2 0.89 0.79 1.09 0.29 Rubredoxin-related compare
1JJ2_Y_0 6AZ3_o_1,2 0.89 0.79 1.06 0.27 Rubredoxin-related compare
1JJ2_Y_0 7O7Y_Bp_B5 0.78 0.94 2.04 0.47 Rubredoxin-related compare
1YHQ_Z_0 6AZ3_o_1,2 0.90 0.79 0.96 0.29 Rubredoxin-related compare
1YHQ_Z_0 7O7Y_Bp_B5 0.76 0.94 1.97 0.36 Rubredoxin-related compare
1VQ8_Z_0 7O7Y_Bp_B5 0.75 0.94 1.95 0.37 Rubredoxin-related compare
1VQ8_Z_0 6AZ3_o_1,2 0.88 0.79 1.05 0.26 Rubredoxin-related compare
3CC2_Z_0 6AZ3_o_1,2 0.90 0.79 1.01 0.29 Rubredoxin-related compare
3CC2_Z_0 7O7Y_Bp_B5 0.76 0.94 1.95 0.36 Rubredoxin-related compare
6AZ3_o_1,2 7O7Y_Bp_B5 0.95 0.92 0.76 0.57 Rubredoxin-related Eukaryotic large subunit ribosomal RNA compare