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All interfaces > All interologs > Interface groups > group121 > 1VQ8_E_0 vs 6AZ3_E_2

Interface analysis


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Common contacts -

1VQ8_E
1VQ8_0
6AZ3_E
6AZ3_2
Conserved?
E:161 [VAL] 0:2566 [A] E:173 [LYS] 2:1339 [A] ✔
E:160 [ARG] 0:2564 [G] E:172 [ARG] 2:1337 [G] ✔
E:160 [ARG] 0:2565 [C] E:172 [ARG] 2:1338 [C] ✔
E:160 [ARG] 0:2566 [A] E:172 [ARG] 2:1339 [A] ✔
E:156 [ASP] 0:2568 [A] E:168 [LYS] 2:1341 [A] ✔
E:158 [ASP] 0:2565 [C] E:170 [ASP] 2:1338 [C] ✔
E:158 [ASP] 0:2566 [A] E:170 [ASP] 2:1339 [A] ✔
E:158 [ASP] 0:2567 [G] E:170 [ASP] 2:1340 [G] ✔
E:162 [PHE] 0:2566 [A] E:174 [PHE] 2:1339 [A] ✔
E:162 [PHE] 0:2567 [G] E:174 [PHE] 2:1340 [G] ✔
E:155 [ASN] 0:2560 [C] E:167 [LYS] 2:1333 [C] ✔
E:157 [LYS] 0:2565 [C] E:169 [LYS] 2:1338 [C] ✔
E:157 [LYS] 0:2567 [G] E:169 [LYS] 2:1340 [G] ✔
E:157 [LYS] 0:2568 [A] E:169 [LYS] 2:1341 [A] ✔
E:156 [ASP] 0:2567 [G] E:168 [LYS] 2:1340 [G] ❌ 6AZ3_E_2
E:153 [ARG] 0:2561 [C] E:165 [LEU] 2:1334 [G] ❌ 6AZ3_E:165, 6AZ3_2:1334 no longer at interface
E:155 [ASN] 0:2561 [C] E:167 [LYS] 2:1334 [G] ❌ 6AZ3_2:1334 no longer at interface
E:155 [ASN] 0:2559 [C] E:167 [LYS] 2:1332 [G] ❌ 1VQ8_0:2559 no longer at interface
E:159 [VAL] 0:2562 [G] E:171 [ILE] 2:1335 [C] ❌ 1VQ8_E:159, 1VQ8_0:2562 no longer at interface
E:160 [ARG] 0:2563 [U] E:172 [ARG] 2:1336 [C] ❌ 1VQ8_0:2563 no longer at interface
E:153 [ARG] 0:2560 [C] E:165 [LEU] 2:1333 [C] ❌ 6AZ3_E:165 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.82 2.44 0.50 0.89 0.81 0.88 0.67 0.85 0.87 0.29 0.86


Other pairs involving 1VQ8_E_0 or 6AZ3_E_2

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 1YHQ_E_0 1.00 1.0 0.22 1.0 Ribosomal protein L6 Archaeal large subunit ribosomal RNA compare
1VQ8_E_0 4Y4O_1H_1A 0.72 0.93 1.67 0.15 Ribosomal protein L6 compare
1VQ8_E_0 6AZ3_E_2 0.85 0.82 2.44 0.5 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_2 0.83 0.82 2.3 0.5 Ribosomal protein L6 compare
1VQ8_E_0 6AZ3_E_4 0.84 0.86 1.45 0.45 Ribosomal protein L6 compare
1VQ8_E_0 6S0Z_G_A 0.59 0.93 2.63 0.18 Ribosomal protein L6 compare
6AZ3_E_2 6S0Z_G_A 0.42 0.82 3.69 0.0 Ribosomal protein L6 compare
1VQ8_E_0 7K00_g_a 0.71 0.9 2.26 0.2 Ribosomal protein L6 compare
6AZ3_E_2 7K00_g_a 0.41 0.83 2.88 0.0 Ribosomal protein L6 compare
1VQ8_E_0 7O7Y_BH_B5 0.81 0.94 2.38 0.55 Ribosomal protein L6 compare
6AZ3_E_2 7O7Y_BH_B5 0.98 0.92 0.68 0.56 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
1VQ8_E_0 7RYG_G_A 0.63 0.92 3.83 0.17 Ribosomal protein L6 compare