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All interfaces > All interologs > Interface groups > group121 > 1VQ8_E_0 vs 7O7Y_BH_B5

Interface analysis


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Common contacts -

1VQ8_E
1VQ8_0
7O7Y_BH
7O7Y_B5
Conserved?
E:161 [VAL] 0:2566 [A] BH:174 [LYS] B5:4223 [A] ✔
E:161 [VAL] 0:2695 [C] BH:174 [LYS] B5:4349 [C] ✔
E:161 [VAL] 0:2696 [G] BH:174 [LYS] B5:4350 [G] ✔
E:64 [THR] 0:2782 [G] BH:72 [THR] B5:4436 [G] ✔
E:64 [THR] 0:2783 [A] BH:72 [THR] B5:4437 [A] ✔
E:64 [THR] 0:2792 [A] BH:72 [THR] B5:4446 [A] ✔
E:64 [THR] 0:2793 [A] BH:72 [THR] B5:4447 [A] ✔
E:111 [LYS] 0:2689 [A] BH:121 [LYS] B5:4343 [U] ✔
E:111 [LYS] 0:2690 [U] BH:121 [LYS] B5:4344 [C] ✔
E:111 [LYS] 0:2704 [C] BH:121 [LYS] B5:4358 [C] ✔
E:111 [LYS] 0:2705 [U] BH:121 [LYS] B5:4359 [C] ✔
E:109 [GLY] 0:2690 [U] BH:119 [GLY] B5:4344 [C] ✔
E:109 [GLY] 0:2703 [A] BH:119 [GLY] B5:4357 [A] ✔
E:91 [PHE] 0:2693 [U] BH:99 [PHE] B5:4347 [U] ✔
E:91 [PHE] 0:2694 [A] BH:99 [PHE] B5:4348 [A] ✔
E:56 [ALA] 0:1139 [U] BH:64 [ARG] B5:1888 [U] ✔
E:56 [ALA] 0:1140 [C] BH:64 [ARG] B5:1889 [U] ✔
E:56 [ALA] 0:2784 [A] BH:64 [ARG] B5:4438 [A] ✔
E:112 [ALA] 0:2704 [C] BH:122 [TYR] B5:4358 [C] ✔
E:112 [ALA] 0:2705 [U] BH:122 [TYR] B5:4359 [C] ✔
E:160 [ARG] 0:2564 [G] BH:173 [ARG] B5:4221 [G] ✔
E:160 [ARG] 0:2565 [C] BH:173 [ARG] B5:4222 [C] ✔
E:160 [ARG] 0:2566 [A] BH:173 [ARG] B5:4223 [A] ✔
E:156 [ASP] 0:2567 [G] BH:169 [ASN] B5:4224 [G] ✔
E:156 [ASP] 0:2568 [A] BH:169 [ASN] B5:4225 [A] ✔
E:146 [ALA] 0:2779 [G] BH:159 [ALA] B5:4433 [A] ✔
E:146 [ALA] 0:2780 [C] BH:159 [ALA] B5:4434 [C] ✔
E:60 [SER] 0:2783 [A] BH:68 [ALA] B5:4437 [A] ✔
E:60 [SER] 0:2784 [A] BH:68 [ALA] B5:4438 [A] ✔
E:60 [SER] 0:2792 [A] BH:68 [ALA] B5:4446 [A] ✔
E:57 [LYS] 0:1138 [G] BH:65 [LYS] B5:1887 [G] ✔
E:57 [LYS] 0:1139 [U] BH:65 [LYS] B5:1888 [U] ✔
E:57 [LYS] 0:2792 [A] BH:65 [LYS] B5:4446 [A] ✔
E:143 [GLN] 0:2780 [C] BH:156 [ASN] B5:4434 [C] ✔
E:143 [GLN] 0:2796 [U] BH:156 [ASN] B5:4450 [C] ✔
E:142 [GLY] 0:2780 [C] BH:155 [SER] B5:4434 [C] ✔
E:142 [GLY] 0:2781 [U] BH:155 [SER] B5:4435 [PSU] ✔
E:90 [HIS] 0:2693 [U] BH:98 [HIS] B5:4347 [U] ✔
E:90 [HIS] 0:2694 [A] BH:98 [HIS] B5:4348 [A] ✔
E:90 [HIS] 0:2695 [C] BH:98 [HIS] B5:4349 [C] ✔
E:108 [LEU] 0:2694 [A] BH:118 [LEU] B5:4348 [A] ✔
E:108 [LEU] 0:2702 [A] BH:118 [LEU] B5:4356 [A] ✔
E:108 [LEU] 0:2703 [A] BH:118 [LEU] B5:4357 [A] ✔
E:59 [MET] 0:2783 [A] BH:67 [LEU] B5:4437 [A] ✔
E:35 [TYR] 0:2793 [A] BH:40 [HIS] B5:4447 [A] ✔
E:147 [ASP] 0:2796 [U] BH:160 [LEU] B5:4450 [C] ✔
E:158 [ASP] 0:2565 [C] BH:171 [ASP] B5:4222 [C] ✔
E:158 [ASP] 0:2566 [A] BH:171 [ASP] B5:4223 [A] ✔
E:158 [ASP] 0:2567 [G] BH:171 [ASP] B5:4224 [G] ✔
E:162 [PHE] 0:2566 [A] BH:175 [PHE] B5:4223 [A] ✔
E:162 [PHE] 0:2567 [G] BH:175 [PHE] B5:4224 [G] ✔
E:162 [PHE] 0:2694 [A] BH:175 [PHE] B5:4348 [A] ✔
E:162 [PHE] 0:2695 [C] BH:175 [PHE] B5:4349 [C] ✔
E:89 [SER] 0:2695 [C] BH:97 [ALA] B5:4349 [C] ✔
E:71 [ASN] 0:2781 [U] BH:79 [ASN] B5:4435 [PSU] ✔
E:71 [ASN] 0:2782 [G] BH:79 [ASN] B5:4436 [G] ✔
E:139 [GLU] 0:2780 [C] BH:152 [GLU] B5:4434 [C] ✔
E:139 [GLU] 0:2781 [U] BH:152 [GLU] B5:4435 [PSU] ✔
E:139 [GLU] 0:2794 [G] BH:152 [GLU] B5:4448 [G] ✔
E:139 [GLU] 0:2795 [C] BH:152 [GLU] B5:4449 [U] ✔
E:155 [ASN] 0:2560 [C] BH:168 [LYS] B5:4217 [PSU] ✔
E:82 [TYR] 0:2780 [C] BH:90 [TYR] B5:4434 [C] ✔
E:82 [TYR] 0:2781 [U] BH:90 [TYR] B5:4435 [PSU] ✔
E:138 [ILE] 0:2780 [C] BH:151 [ILE] B5:4434 [C] ✔
E:138 [ILE] 0:2781 [U] BH:151 [ILE] B5:4435 [PSU] ✔
E:138 [ILE] 0:2782 [G] BH:151 [ILE] B5:4436 [G] ✔
E:150 [GLN] 0:2778 [A] BH:163 [GLN] B5:4432 [G] ✔
E:150 [GLN] 0:2779 [G] BH:163 [GLN] B5:4433 [A] ✔
E:67 [SER] 0:2782 [G] BH:75 [SER] B5:4436 [G] ✔
E:67 [SER] 0:2783 [A] BH:75 [SER] B5:4437 [A] ✔
E:63 [GLY] 0:2782 [G] BH:71 [ARG] B5:4436 [G] ✔
E:63 [GLY] 0:2783 [A] BH:71 [ARG] B5:4437 [A] ✔
E:157 [LYS] 0:2565 [C] BH:170 [LYS] B5:4222 [C] ✔
E:157 [LYS] 0:2567 [G] BH:170 [LYS] B5:4224 [G] ✔
E:157 [LYS] 0:2568 [A] BH:170 [LYS] B5:4225 [A] ✔
E:157 [LYS] 0:2694 [A] BH:170 [LYS] B5:4348 [A] ✔
E:157 [LYS] 0:2702 [A] BH:170 [LYS] B5:4356 [A] ✔
E:119 [HIS] 0:2796 [U] BH:129 [ARG] B5:4450 [C] ✔
E:119 [HIS] 0:2797 [C] BH:129 [ARG] B5:4451 [A] ✔
E:68 [HIS] 0:2781 [U] BH:76 [HIS] B5:4435 [PSU] ✔
E:68 [HIS] 0:2782 [G] BH:76 [HIS] B5:4436 [G] ✔
E:68 [HIS] 0:2793 [A] BH:76 [HIS] B5:4447 [A] ✔
E:61 [THR] 0:2783 [A] BH:69 [THR] B5:4437 [A] ✔
E:61 [THR] 0:2792 [A] BH:69 [THR] B5:4446 [A] ✔
E:61 [THR] 0:2793 [A] BH:69 [THR] B5:4447 [A] ✔
E:110 [GLU] 0:2703 [A] BH:120 [GLU] B5:4357 [A] ✔
E:110 [GLU] 0:2704 [C] BH:120 [GLU] B5:4358 [C] ✔
E:31 [ARG] 0:2793 [A] BH:36 [ARG] B5:4447 [A] ✔
E:31 [ARG] 0:2794 [G] BH:36 [ARG] B5:4448 [G] ✔
E:109 [GLY] 0:2704 [C] BH:119 [GLY] B5:4358 [C] ❌ 7O7Y_BH_B5
E:57 [LYS] 0:1140 [C] BH:65 [LYS] B5:1889 [U] ❌ 7O7Y_BH_B5
E:143 [GLN] 0:2779 [G] BH:156 [ASN] B5:4433 [A] ❌ 7O7Y_BH_B5
E:143 [GLN] 0:2795 [C] BH:156 [ASN] B5:4449 [U] ❌ 7O7Y_BH_B5
E:59 [MET] 0:2784 [A] BH:67 [LEU] B5:4438 [A] ❌ 7O7Y_BH_B5
E:34 [TRP] 0:2793 [A] BH:39 [ASN] B5:4447 [A] ❌ 7O7Y_BH_B5
E:171 [LYS] 0:2780 [C] BH:184 [LYS] B5:4434 [C] ❌ 7O7Y_BH_B5
E:147 [ASP] 0:2797 [C] BH:160 [LEU] B5:4451 [A] ❌ 1VQ8_E_0
E:150 [GLN] 0:2796 [U] BH:163 [GLN] B5:4450 [C] ❌ 1VQ8_E_0
E:150 [GLN] 0:2797 [C] BH:163 [GLN] B5:4451 [A] ❌ 1VQ8_E_0
E:157 [LYS] 0:2703 [A] BH:170 [LYS] B5:4357 [A] ❌ 1VQ8_E_0
E:171 [LYS] 0:2781 [U] BH:184 [LYS] B5:4435 [PSU] ❌ 1VQ8_E_0
E:31 [ARG] 0:2781 [U] BH:36 [ARG] B5:4435 [PSU] ❌ 1VQ8_E_0
E:35 [TYR] 0:2794 [G] BH:40 [HIS] B5:4448 [G] ❌ 1VQ8_E_0
E:63 [GLY] 0:2784 [A] BH:71 [ARG] B5:4438 [A] ❌ 1VQ8_E_0
E:57 [LYS] 0:1117 [A] BH:65 [LYS] B5:1867 [C] ❌ 7O7Y_B5:1867 no longer at interface
E:57 [LYS] 0:1118 [A] BH:65 [LYS] B5:1868 [A] ❌ 7O7Y_B5:1868 no longer at interface
E:153 [ARG] 0:2561 [C] BH:166 [THR] B5:4218 [G] ❌ 7O7Y_BH:166, 7O7Y_B5:4218 no longer at interface
E:153 [ARG] 0:2777 [G] BH:166 [THR] B5:4431 [U] ❌ 7O7Y_BH:166, 7O7Y_B5:4431 no longer at interface
E:155 [ASN] 0:2561 [C] BH:168 [LYS] B5:4218 [G] ❌ 7O7Y_B5:4218 no longer at interface
E:159 [VAL] 0:2562 [G] BH:172 [ILE] B5:4219 [A] ❌ 1VQ8_E:159, 1VQ8_0:2562 no longer at interface
E:160 [ARG] 0:2563 [U] BH:173 [ARG] B5:4220 [A] ❌ 1VQ8_0:2563 no longer at interface
E:56 [ALA] 0:2785 [C] BH:64 [ARG] B5:4439 [C] ❌ 1VQ8_0:2785 no longer at interface
E:63 [GLY] 0:2786 [G] BH:71 [ARG] B5:4440 [G] ❌ 1VQ8_0:2786 no longer at interface
E:63 [GLY] 0:2787 [C] BH:71 [ARG] B5:4441 [C] ❌ 1VQ8_0:2787 no longer at interface
E:65 [PHE] 0:2793 [A] BH:73 [ILE] B5:4447 [A] ❌ 7O7Y_BH:73 no longer at interface
E:153 [ARG] 0:2560 [C] BH:166 [THR] B5:4217 [PSU] ❌ 7O7Y_BH:166 no longer at interface
E:153 [ARG] 0:2778 [A] BH:166 [THR] B5:4432 [G] ❌ 7O7Y_BH:166 no longer at interface
E:54 [ASP] 0:1140 [C] BH:62 [GLY] B5:1889 [U] ❌ 7O7Y_BH:62 no longer at interface
E:55 [ASN] 0:1139 [U] BH:63 [ASN] B5:1888 [U] ❌ 7O7Y_BH:63 no longer at interface
E:55 [ASN] 0:1140 [C] BH:63 [ASN] B5:1889 [U] ❌ 7O7Y_BH:63 no longer at interface
E:159 [VAL] 0:2565 [C] BH:172 [ILE] B5:4222 [C] ❌ 1VQ8_E:159 no longer at interface
E:36 [PRO] 0:2793 [A] BH:41 [ILE] B5:4447 [A] ❌ 1VQ8_E:36 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.94 2.38 0.55 0.9 0.94 0.9 0.89 0.81 0.82 0.30 0.55


Other pairs involving 1VQ8_E_0 or 7O7Y_BH_B5

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 1YHQ_E_0 1.00 1.0 0.22 1.0 Ribosomal protein L6 Archaeal large subunit ribosomal RNA compare
1VQ8_E_0 4Y4O_1H_1A 0.72 0.93 1.67 0.15 Ribosomal protein L6 compare
1VQ8_E_0 6AZ3_E_2 0.85 0.82 2.44 0.5 Ribosomal protein L6 compare
1VQ8_E_0 6AZ3_E_4 0.84 0.86 1.45 0.45 Ribosomal protein L6 compare
1VQ8_E_0 6S0Z_G_A 0.59 0.93 2.63 0.18 Ribosomal protein L6 compare
1VQ8_E_0 7K00_g_a 0.71 0.9 2.26 0.2 Ribosomal protein L6 compare
1VQ8_E_0 7O7Y_BH_B5 0.81 0.94 2.38 0.55 Ribosomal protein L6 compare
7K00_g_a 7O7Y_BH_B5 0.58 0.9 2.4 0.1 Ribosomal protein L6 compare
6AZ3_E_4 7O7Y_BH_B5 0.90 0.92 0.54 0.61 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
4Y4O_1H_1A 7O7Y_BH_B5 0.58 0.89 2.14 0.1 Ribosomal protein L6 compare
6S0Z_G_A 7O7Y_BH_B5 0.48 0.89 2.89 0.15 Ribosomal protein L6 compare
6AZ3_E_2 7O7Y_BH_B5 0.98 0.92 0.68 0.56 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
1YHQ_E_0 7O7Y_BH_B5 0.82 0.94 2.31 0.54 Ribosomal protein L6 compare
1VQ8_E_0 7RYG_G_A 0.63 0.92 3.83 0.17 Ribosomal protein L6 compare