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All interfaces > All interologs > Interface groups > group121 > 1YHQ_E_0 vs 6AZ3_E_4

Interface analysis


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Common contacts -

1YHQ_E
1YHQ_0
6AZ3_E
6AZ3_4
Conserved?
E:161 [VAL] 0:2695 [C] E:173 [LYS] 4:53 [C] ✔
E:161 [VAL] 0:2696 [G] E:173 [LYS] 4:54 [G] ✔
E:64 [THR] 0:2782 [G] E:71 [THR] 4:140 [G] ✔
E:64 [THR] 0:2783 [A] E:71 [THR] 4:141 [A] ✔
E:64 [THR] 0:2792 [A] E:71 [THR] 4:150 [A] ✔
E:64 [THR] 0:2793 [A] E:71 [THR] 4:151 [A] ✔
E:111 [LYS] 0:2690 [U] E:118 [LYS] 4:48 [U] ✔
E:111 [LYS] 0:2704 [C] E:118 [LYS] 4:62 [C] ✔
E:111 [LYS] 0:2705 [U] E:118 [LYS] 4:63 [U] ✔
E:109 [GLY] 0:2690 [U] E:116 [GLY] 4:48 [U] ✔
E:109 [GLY] 0:2703 [A] E:116 [GLY] 4:61 [A] ✔
E:109 [GLY] 0:2704 [C] E:116 [GLY] 4:62 [C] ✔
E:91 [PHE] 0:2693 [U] E:98 [PHE] 4:51 [U] ✔
E:91 [PHE] 0:2694 [A] E:98 [PHE] 4:52 [A] ✔
E:56 [ALA] 0:2784 [A] E:63 [LYS] 4:142 [A] ✔
E:112 [ALA] 0:2704 [C] E:119 [ARG] 4:62 [C] ✔
E:112 [ALA] 0:2705 [U] E:119 [ARG] 4:63 [U] ✔
E:146 [ALA] 0:2779 [G] E:158 [ALA] 4:137 [G] ✔
E:146 [ALA] 0:2780 [C] E:158 [ALA] 4:138 [C] ✔
E:60 [SER] 0:2783 [A] E:67 [ALA] 4:141 [A] ✔
E:60 [SER] 0:2784 [A] E:67 [ALA] 4:142 [A] ✔
E:60 [SER] 0:2792 [A] E:67 [ALA] 4:150 [A] ✔
E:57 [LYS] 0:2792 [A] E:64 [ILE] 4:150 [A] ✔
E:143 [GLN] 0:2780 [C] E:155 [ARG] 4:138 [C] ✔
E:143 [GLN] 0:2796 [U] E:155 [ARG] 4:154 [C] ✔
E:142 [GLY] 0:2780 [C] E:154 [SER] 4:138 [C] ✔
E:142 [GLY] 0:2781 [U] E:154 [SER] 4:139 [U] ✔
E:90 [HIS] 0:2693 [U] E:97 [HIS] 4:51 [U] ✔
E:90 [HIS] 0:2694 [A] E:97 [HIS] 4:52 [A] ✔
E:90 [HIS] 0:2695 [C] E:97 [HIS] 4:53 [C] ✔
E:108 [LEU] 0:2702 [A] E:115 [LEU] 4:60 [A] ✔
E:108 [LEU] 0:2703 [A] E:115 [LEU] 4:61 [A] ✔
E:59 [MET] 0:2783 [A] E:66 [ILE] 4:141 [A] ✔
E:59 [MET] 0:2784 [A] E:66 [ILE] 4:142 [A] ✔
E:35 [TYR] 0:2793 [A] E:40 [HIS] 4:151 [A] ✔
E:147 [ASP] 0:2796 [U] E:159 [VAL] 4:154 [C] ✔
E:162 [PHE] 0:2694 [A] E:174 [PHE] 4:52 [A] ✔
E:162 [PHE] 0:2695 [C] E:174 [PHE] 4:53 [C] ✔
E:153 [ARG] 0:2778 [A] E:165 [LEU] 4:136 [G] ✔
E:89 [SER] 0:2695 [C] E:96 [ALA] 4:53 [C] ✔
E:71 [ASN] 0:2781 [U] E:78 [ASN] 4:139 [U] ✔
E:71 [ASN] 0:2782 [G] E:78 [ASN] 4:140 [G] ✔
E:139 [GLU] 0:2780 [C] E:151 [GLU] 4:138 [C] ✔
E:139 [GLU] 0:2781 [U] E:151 [GLU] 4:139 [U] ✔
E:139 [GLU] 0:2794 [G] E:151 [GLU] 4:152 [G] ✔
E:82 [TYR] 0:2781 [U] E:89 [PHE] 4:139 [U] ✔
E:138 [ILE] 0:2781 [U] E:150 [LEU] 4:139 [U] ✔
E:138 [ILE] 0:2782 [G] E:150 [LEU] 4:140 [G] ✔
E:150 [GLN] 0:2778 [A] E:162 [GLN] 4:136 [G] ✔
E:150 [GLN] 0:2779 [G] E:162 [GLN] 4:137 [G] ✔
E:67 [SER] 0:2782 [G] E:74 [ALA] 4:140 [G] ✔
E:67 [SER] 0:2783 [A] E:74 [ALA] 4:141 [A] ✔
E:63 [GLY] 0:2782 [G] E:70 [ASN] 4:140 [G] ✔
E:63 [GLY] 0:2783 [A] E:70 [ASN] 4:141 [A] ✔
E:157 [LYS] 0:2694 [A] E:169 [LYS] 4:52 [A] ✔
E:157 [LYS] 0:2702 [A] E:169 [LYS] 4:60 [A] ✔
E:68 [HIS] 0:2781 [U] E:75 [HIS] 4:139 [U] ✔
E:68 [HIS] 0:2782 [G] E:75 [HIS] 4:140 [G] ✔
E:68 [HIS] 0:2793 [A] E:75 [HIS] 4:151 [A] ✔
E:61 [THR] 0:2783 [A] E:68 [CYS] 4:141 [A] ✔
E:61 [THR] 0:2792 [A] E:68 [CYS] 4:150 [A] ✔
E:61 [THR] 0:2793 [A] E:68 [CYS] 4:151 [A] ✔
E:110 [GLU] 0:2703 [A] E:117 [GLU] 4:61 [A] ✔
E:110 [GLU] 0:2704 [C] E:117 [GLU] 4:62 [C] ✔
E:143 [GLN] 0:2779 [G] E:155 [ARG] 4:137 [G] ❌ 6AZ3_E_4
E:82 [TYR] 0:2780 [C] E:89 [PHE] 4:138 [C] ❌ 6AZ3_E_4
E:138 [ILE] 0:2780 [C] E:150 [LEU] 4:138 [C] ❌ 6AZ3_E_4
E:108 [LEU] 0:2694 [A] E:115 [LEU] 4:52 [A] ❌ 1YHQ_E_0
E:143 [GLN] 0:2797 [C] E:155 [ARG] 4:155 [A] ❌ 1YHQ_E_0
E:150 [GLN] 0:2796 [U] E:162 [GLN] 4:154 [C] ❌ 1YHQ_E_0
E:157 [LYS] 0:2703 [A] E:169 [LYS] 4:61 [A] ❌ 1YHQ_E_0
E:35 [TYR] 0:2794 [G] E:40 [HIS] 4:152 [G] ❌ 1YHQ_E_0
E:63 [GLY] 0:2784 [A] E:70 [ASN] 4:142 [A] ❌ 1YHQ_E_0
E:111 [LYS] 0:2689 [A] E:118 [LYS] 4:47 [G] ❌ 6AZ3_4:47 no longer at interface
E:143 [GLN] 0:2795 [C] E:155 [ARG] 4:153 [C] ❌ 6AZ3_4:153 no longer at interface
E:153 [ARG] 0:2777 [G] E:165 [LEU] 4:135 [C] ❌ 6AZ3_4:135 no longer at interface
E:139 [GLU] 0:2795 [C] E:151 [GLU] 4:153 [C] ❌ 6AZ3_4:153 no longer at interface
E:111 [LYS] 0:2691 [A] E:118 [LYS] 4:49 [A] ❌ 1YHQ_0:2691 no longer at interface
E:56 [ALA] 0:2785 [C] E:63 [LYS] 4:143 [C] ❌ 1YHQ_0:2785 no longer at interface
E:65 [PHE] 0:2793 [A] E:72 [THR] 4:151 [A] ❌ 6AZ3_E:72 no longer at interface
E:34 [TRP] 0:2793 [A] E:39 [THR] 4:151 [A] ❌ 6AZ3_E:39 no longer at interface
E:119 [HIS] 0:2796 [U] E:126 [PRO] 4:154 [C] ❌ 6AZ3_E:126 no longer at interface
E:119 [HIS] 0:2797 [C] E:126 [PRO] 4:155 [A] ❌ 6AZ3_E:126 no longer at interface
E:31 [ARG] 0:2781 [U] E:36 [LYS] 4:139 [U] ❌ 6AZ3_E:36 no longer at interface
E:31 [ARG] 0:2793 [A] E:36 [LYS] 4:151 [A] ❌ 6AZ3_E:36 no longer at interface
E:31 [ARG] 0:2794 [G] E:36 [LYS] 4:152 [G] ❌ 6AZ3_E:36 no longer at interface
E:171 [LYS] 0:2781 [U] E:183 [LYS] 4:139 [U] ❌ 1YHQ_E:171 no longer at interface
E:36 [PRO] 0:2793 [A] E:41 [LEU] 4:151 [A] ❌ 1YHQ_E:36 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.86 1.35 0.42 0.89 0.79 0.94 0.91 0.85 0.73 0.28 0.62


Other pairs involving 1YHQ_E_0 or 6AZ3_E_4

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 6AZ3_E_4 0.84 0.86 1.45 0.45 Ribosomal protein L6 compare
1VQ8_E_0 1YHQ_E_0 1.00 1.0 0.22 1.0 Ribosomal protein L6 Archaeal large subunit ribosomal RNA compare
1YHQ_E_0 7RYG_G_A 0.64 0.92 3.91 0.17 Ribosomal protein L6 compare
1YHQ_E_0 7O7Y_BH_B5 0.82 0.94 2.31 0.54 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_4 0.85 0.86 1.35 0.42 Ribosomal protein L6 compare
1YHQ_E_0 7K00_g_a 0.71 0.91 2.33 0.2 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_2 0.83 0.82 2.3 0.5 Ribosomal protein L6 compare
1YHQ_E_0 6S0Z_G_A 0.60 0.93 2.65 0.18 Ribosomal protein L6 compare
1YHQ_E_0 4Y4O_1H_1A 0.71 0.93 1.96 0.15 Ribosomal protein L6 compare
4Y4O_1H_1A 6AZ3_E_4 0.72 0.82 1.87 0.06 Ribosomal protein L6 compare
6AZ3_E_4 6S0Z_G_A 0.63 0.82 2.0 0.18 Ribosomal protein L6 compare
6AZ3_E_4 7K00_g_a 0.73 0.82 1.97 0.15 Ribosomal protein L6 compare
6AZ3_E_4 7O7Y_BH_B5 0.90 0.92 0.54 0.61 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
6AZ3_E_4 7RYG_G_A 0.69 0.81 2.41 0.15 Ribosomal protein L6 compare