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All interfaces > All interologs > Interface groups > group121 > 1YHQ_E_0 vs 6S0Z_G_A

Interface analysis


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Common contacts -

1YHQ_E
1YHQ_0
6S0Z_G
6S0Z_A
Conserved?
E:161 [VAL] 0:2566 [A] G:157 [TYR] A:2558 [A] ✔
E:64 [THR] 0:2782 [G] G:67 [THR] A:2774 [G] ✔
E:64 [THR] 0:2783 [A] G:67 [THR] A:2775 [A] ✔
E:64 [THR] 0:2792 [A] G:67 [THR] A:2784 [A] ✔
E:111 [LYS] 0:2690 [U] G:110 [SER] A:2680 [U] ✔
E:111 [LYS] 0:2704 [C] G:110 [SER] A:2694 [C] ✔
E:111 [LYS] 0:2705 [U] G:110 [SER] A:2695 [G] ✔
E:112 [ALA] 0:2704 [C] G:111 [HIS] A:2694 [C] ✔
E:112 [ALA] 0:2705 [U] G:111 [HIS] A:2695 [G] ✔
E:160 [ARG] 0:2565 [C] G:156 [PRO] A:2557 [U] ✔
E:146 [ALA] 0:2779 [G] G:146 [SER] A:2771 [G] ✔
E:146 [ALA] 0:2780 [C] G:146 [SER] A:2772 [C] ✔
E:60 [SER] 0:2783 [A] G:63 [THR] A:2775 [A] ✔
E:60 [SER] 0:2784 [A] G:63 [THR] A:2776 [A] ✔
E:60 [SER] 0:2792 [A] G:63 [THR] A:2784 [A] ✔
E:143 [GLN] 0:2780 [C] G:143 [ALA] A:2772 [C] ✔
E:142 [GLY] 0:2780 [C] G:142 [GLY] A:2772 [C] ✔
E:108 [LEU] 0:2702 [A] G:108 [GLY] A:2692 [A] ✔
E:108 [LEU] 0:2703 [A] G:108 [GLY] A:2693 [C] ✔
E:59 [MET] 0:2783 [A] G:62 [ARG] A:2775 [A] ✔
E:59 [MET] 0:2784 [A] G:62 [ARG] A:2776 [A] ✔
E:147 [ASP] 0:2796 [U] G:147 [ASN] A:2788 [A] ✔
E:162 [PHE] 0:2695 [C] G:158 [LYS] A:2685 [C] ✔
E:71 [ASN] 0:2781 [U] G:74 [ASN] A:2773 [U] ✔
E:71 [ASN] 0:2782 [G] G:74 [ASN] A:2774 [G] ✔
E:139 [GLU] 0:2780 [C] G:139 [GLU] A:2772 [C] ✔
E:139 [GLU] 0:2781 [U] G:139 [GLU] A:2773 [U] ✔
E:82 [TYR] 0:2781 [U] G:85 [LYS] A:2773 [U] ✔
E:138 [ILE] 0:2780 [C] G:138 [LYS] A:2772 [C] ✔
E:138 [ILE] 0:2781 [U] G:138 [LYS] A:2773 [U] ✔
E:138 [ILE] 0:2782 [G] G:138 [LYS] A:2774 [G] ✔
E:67 [SER] 0:2782 [G] G:70 [ALA] A:2774 [G] ✔
E:67 [SER] 0:2783 [A] G:70 [ALA] A:2775 [A] ✔
E:63 [GLY] 0:2782 [G] G:66 [GLY] A:2774 [G] ✔
E:63 [GLY] 0:2783 [A] G:66 [GLY] A:2775 [A] ✔
E:68 [HIS] 0:2781 [U] G:71 [LEU] A:2773 [U] ✔
E:68 [HIS] 0:2793 [A] G:71 [LEU] A:2785 [A] ✔
E:61 [THR] 0:2783 [A] G:64 [ASN] A:2775 [A] ✔
E:61 [THR] 0:2792 [A] G:64 [ASN] A:2784 [A] ✔
E:61 [THR] 0:2793 [A] G:64 [ASN] A:2785 [A] ✔
E:110 [GLU] 0:2703 [A] G:109 [TYR] A:2693 [C] ✔
E:110 [GLU] 0:2704 [C] G:109 [TYR] A:2694 [C] ✔
E:31 [ARG] 0:2794 [G] G:35 [ARG] A:2786 [G] ✔
E:55 [ASN] 0:1139 [U] G:59 [LYS] A:1079 [U] ✔
E:161 [VAL] 0:2695 [C] G:157 [TYR] A:2685 [C] ❌ 6S0Z_G_A
E:161 [VAL] 0:2696 [G] G:157 [TYR] A:2686 [G] ❌ 6S0Z_G_A
E:64 [THR] 0:2793 [A] G:67 [THR] A:2785 [A] ❌ 6S0Z_G_A
E:160 [ARG] 0:2564 [G] G:156 [PRO] A:2556 [G] ❌ 6S0Z_G_A
E:160 [ARG] 0:2566 [A] G:156 [PRO] A:2558 [A] ❌ 6S0Z_G_A
E:143 [GLN] 0:2779 [G] G:143 [ALA] A:2771 [G] ❌ 6S0Z_G_A
E:143 [GLN] 0:2796 [U] G:143 [ALA] A:2788 [A] ❌ 6S0Z_G_A
E:142 [GLY] 0:2781 [U] G:142 [GLY] A:2773 [U] ❌ 6S0Z_G_A
E:162 [PHE] 0:2566 [A] G:158 [LYS] A:2558 [A] ❌ 6S0Z_G_A
E:162 [PHE] 0:2567 [G] G:158 [LYS] A:2559 [G] ❌ 6S0Z_G_A
E:162 [PHE] 0:2694 [A] G:158 [LYS] A:2684 [A] ❌ 6S0Z_G_A
E:139 [GLU] 0:2794 [G] G:139 [GLU] A:2786 [G] ❌ 6S0Z_G_A
E:82 [TYR] 0:2780 [C] G:85 [LYS] A:2772 [C] ❌ 6S0Z_G_A
E:68 [HIS] 0:2782 [G] G:71 [LEU] A:2774 [G] ❌ 6S0Z_G_A
E:31 [ARG] 0:2781 [U] G:35 [ARG] A:2773 [U] ❌ 6S0Z_G_A
E:31 [ARG] 0:2793 [A] G:35 [ARG] A:2785 [A] ❌ 6S0Z_G_A
E:110 [GLU] 0:2690 [U] G:109 [TYR] A:2680 [U] ❌ 1YHQ_E_0
E:111 [LYS] 0:2703 [A] G:110 [SER] A:2693 [C] ❌ 1YHQ_E_0
E:161 [VAL] 0:2567 [G] G:157 [TYR] A:2559 [G] ❌ 1YHQ_E_0
E:161 [VAL] 0:2565 [C] G:157 [TYR] A:2557 [U] ❌ 1YHQ_E_0
E:161 [VAL] 0:2564 [G] G:157 [TYR] A:2556 [G] ❌ 1YHQ_E_0
E:162 [PHE] 0:2696 [G] G:158 [LYS] A:2686 [G] ❌ 1YHQ_E_0
E:55 [ASN] 0:2784 [A] G:59 [LYS] A:2776 [A] ❌ 1YHQ_E_0
E:55 [ASN] 0:1138 [G] G:59 [LYS] A:1078 [G] ❌ 1YHQ_E_0
E:111 [LYS] 0:2689 [A] G:110 [SER] A:2679 [U] ❌ 6S0Z_A:2679 no longer at interface
E:91 [PHE] 0:2693 [U] G:93 [GLY] A:2683 [U] ❌ 6S0Z_G:93, 6S0Z_A:2683 no longer at interface
E:57 [LYS] 0:1117 [A] G:60 [GLU] A:1064 [A] ❌ 6S0Z_G:60, 6S0Z_A:1064 no longer at interface
E:57 [LYS] 0:1118 [A] G:60 [GLU] A:1065 [A] ❌ 6S0Z_G:60, 6S0Z_A:1065 no longer at interface
E:57 [LYS] 0:1140 [C] G:60 [GLU] A:1080 [G] ❌ 6S0Z_G:60, 6S0Z_A:1080 no longer at interface
E:143 [GLN] 0:2795 [C] G:143 [ALA] A:2787 [C] ❌ 6S0Z_A:2787 no longer at interface
E:153 [ARG] 0:2560 [C] G:153 [PRO] A:2552 [G] ❌ 6S0Z_G:153, 6S0Z_A:2552 no longer at interface
E:153 [ARG] 0:2561 [C] G:153 [PRO] A:2553 [G] ❌ 6S0Z_G:153, 6S0Z_A:2553 no longer at interface
E:153 [ARG] 0:2777 [G] G:153 [PRO] A:2769 [G] ❌ 6S0Z_G:153, 6S0Z_A:2769 no longer at interface
E:153 [ARG] 0:2778 [A] G:153 [PRO] A:2770 [U] ❌ 6S0Z_G:153, 6S0Z_A:2770 no longer at interface
E:139 [GLU] 0:2795 [C] G:139 [GLU] A:2787 [C] ❌ 6S0Z_A:2787 no longer at interface
E:150 [GLN] 0:2778 [A] G:150 [SER] A:2770 [U] ❌ 6S0Z_G:150, 6S0Z_A:2770 no longer at interface
E:54 [ASP] 0:1140 [C] G:58 [SER] A:1080 [G] ❌ 6S0Z_G:58, 6S0Z_A:1080 no longer at interface
E:55 [ASN] 0:1140 [C] G:59 [LYS] A:1080 [G] ❌ 6S0Z_A:1080 no longer at interface
E:111 [LYS] 0:2691 [A] G:110 [SER] A:2681 [A] ❌ 1YHQ_0:2691 no longer at interface
E:59 [MET] 0:2785 [C] G:62 [ARG] A:2777 [A] ❌ 1YHQ_0:2785 no longer at interface
E:91 [PHE] 0:2694 [A] G:93 [GLY] A:2684 [A] ❌ 6S0Z_G:93 no longer at interface
E:65 [PHE] 0:2793 [A] G:68 [THR] A:2785 [A] ❌ 6S0Z_G:68 no longer at interface
E:57 [LYS] 0:1138 [G] G:60 [GLU] A:1078 [G] ❌ 6S0Z_G:60 no longer at interface
E:57 [LYS] 0:1139 [U] G:60 [GLU] A:1079 [U] ❌ 6S0Z_G:60 no longer at interface
E:57 [LYS] 0:2792 [A] G:60 [GLU] A:2784 [A] ❌ 6S0Z_G:60 no longer at interface
E:34 [TRP] 0:2793 [A] G:38 [ASN] A:2785 [A] ❌ 6S0Z_G:38 no longer at interface
E:89 [SER] 0:2695 [C] G:92 [VAL] A:2685 [C] ❌ 6S0Z_G:92 no longer at interface
E:150 [GLN] 0:2779 [G] G:150 [SER] A:2771 [G] ❌ 6S0Z_G:150 no longer at interface
E:140 [ALA] 0:2780 [C] G:140 [GLN] A:2772 [C] ❌ 1YHQ_E:140 no longer at interface
E:152 [THR] 0:2703 [A] G:152 [ARG] A:2693 [C] ❌ 1YHQ_E:152 no longer at interface
E:159 [VAL] 0:2566 [A] G:155 [GLU] A:2558 [A] ❌ 1YHQ_E:159 no longer at interface
E:164 [ASP] 0:2695 [C] G:160 [LYS] A:2685 [C] ❌ 1YHQ_E:164 no longer at interface
E:164 [ASP] 0:2694 [A] G:160 [LYS] A:2684 [A] ❌ 1YHQ_E:164 no longer at interface
E:1 [PRO] 0:2784 [A] G:2 [SER] A:2776 [A] ❌ 1YHQ_E:1 no longer at interface
E:92 [PRO] 0:2694 [A] G:94 [TYR] A:2684 [A] ❌ 1YHQ_E:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.93 2.65 0.18 0.77 0.93 0.71 0.73 0.60 0.63 0.13 0.56


Other pairs involving 1YHQ_E_0 or 6S0Z_G_A

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 6S0Z_G_A 0.59 0.93 2.63 0.18 Ribosomal protein L6 compare
1VQ8_E_0 1YHQ_E_0 1.00 1.0 0.22 1.0 Ribosomal protein L6 Archaeal large subunit ribosomal RNA compare
6AZ3_E_4 6S0Z_G_A 0.63 0.82 2.0 0.18 Ribosomal protein L6 compare
4Y4O_1H_1A 6S0Z_G_A 0.77 0.97 1.91 0.53 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6S0Z_G_A 7O7Y_BH_B5 0.48 0.89 2.89 0.15 Ribosomal protein L6 compare
6S0Z_G_A 7RYG_G_A 0.88 0.98 1.9 0.59 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6S0Z_G_A 7K00_g_a 0.83 0.97 1.49 0.65 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6AZ3_E_2 6S0Z_G_A 0.42 0.82 3.69 0.0 Ribosomal protein L6 compare
1YHQ_E_0 7RYG_G_A 0.64 0.92 3.91 0.17 Ribosomal protein L6 compare
1YHQ_E_0 7O7Y_BH_B5 0.82 0.94 2.31 0.54 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_4 0.85 0.86 1.35 0.42 Ribosomal protein L6 compare
1YHQ_E_0 7K00_g_a 0.71 0.91 2.33 0.2 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_2 0.83 0.82 2.3 0.5 Ribosomal protein L6 compare
1YHQ_E_0 6S0Z_G_A 0.60 0.93 2.65 0.18 Ribosomal protein L6 compare
1YHQ_E_0 4Y4O_1H_1A 0.71 0.93 1.96 0.15 Ribosomal protein L6 compare