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All interfaces > All interologs > Interface groups > group121 > 4Y4O_1H_1A vs 6AZ3_E_4

Interface analysis


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Common contacts -

4Y4O_1H
4Y4O_1A
6AZ3_E
6AZ3_4
Conserved?
1H:67 [LEU] 1A:2760 [G] E:71 [THR] 4:140 [G] ✔
1H:67 [LEU] 1A:2761 [A] E:71 [THR] 4:141 [A] ✔
1H:67 [LEU] 1A:2770 [A] E:71 [THR] 4:150 [A] ✔
1H:67 [LEU] 1A:2771 [A] E:71 [THR] 4:151 [A] ✔
1H:147 [ASN] 1A:2774 [G] E:159 [VAL] 4:154 [C] ✔
1H:146 [ALA] 1A:2757 [G] E:158 [ALA] 4:137 [G] ✔
1H:146 [ALA] 1A:2758 [C] E:158 [ALA] 4:138 [C] ✔
1H:108 [GLY] 1A:2677 [A] E:115 [LEU] 4:60 [A] ✔
1H:108 [GLY] 1A:2678 [C] E:115 [LEU] 4:61 [A] ✔
1H:85 [LYS] 1A:2759 [U] E:89 [PHE] 4:139 [U] ✔
1H:143 [GLN] 1A:2758 [C] E:155 [ARG] 4:138 [C] ✔
1H:143 [GLN] 1A:2774 [G] E:155 [ARG] 4:154 [C] ✔
1H:142 [GLY] 1A:2758 [C] E:154 [SER] 4:138 [C] ✔
1H:142 [GLY] 1A:2759 [U] E:154 [SER] 4:139 [U] ✔
1H:70 [THR] 1A:2760 [G] E:74 [ALA] 4:140 [G] ✔
1H:70 [THR] 1A:2761 [A] E:74 [ALA] 4:141 [A] ✔
1H:111 [HIS] 1A:2679 [C] E:119 [ARG] 4:62 [C] ✔
1H:111 [HIS] 1A:2680 [G] E:119 [ARG] 4:63 [U] ✔
1H:66 [GLY] 1A:2760 [G] E:70 [ASN] 4:140 [G] ✔
1H:66 [GLY] 1A:2761 [A] E:70 [ASN] 4:141 [A] ✔
1H:71 [LEU] 1A:2759 [U] E:75 [HIS] 4:139 [U] ✔
1H:71 [LEU] 1A:2760 [G] E:75 [HIS] 4:140 [G] ✔
1H:71 [LEU] 1A:2771 [A] E:75 [HIS] 4:151 [A] ✔
1H:59 [ARG] 1A:2762 [A] E:63 [LYS] 4:142 [A] ✔
1H:64 [LEU] 1A:2761 [A] E:68 [CYS] 4:141 [A] ✔
1H:64 [LEU] 1A:2770 [A] E:68 [CYS] 4:150 [A] ✔
1H:64 [LEU] 1A:2771 [A] E:68 [CYS] 4:151 [A] ✔
1H:74 [ASN] 1A:2759 [U] E:78 [ASN] 4:139 [U] ✔
1H:74 [ASN] 1A:2760 [G] E:78 [ASN] 4:140 [G] ✔
1H:109 [PHE] 1A:2678 [C] E:117 [GLU] 4:61 [A] ✔
1H:109 [PHE] 1A:2679 [C] E:117 [GLU] 4:62 [C] ✔
1H:110 [SER] 1A:2665 [U] E:118 [LYS] 4:48 [U] ✔
1H:110 [SER] 1A:2666 [A] E:118 [LYS] 4:49 [A] ✔
1H:110 [SER] 1A:2679 [C] E:118 [LYS] 4:62 [C] ✔
1H:110 [SER] 1A:2680 [G] E:118 [LYS] 4:63 [U] ✔
1H:62 [LYS] 1A:2761 [A] E:66 [ILE] 4:141 [A] ✔
1H:62 [LYS] 1A:2762 [A] E:66 [ILE] 4:142 [A] ✔
1H:63 [SER] 1A:2761 [A] E:67 [ALA] 4:141 [A] ✔
1H:63 [SER] 1A:2762 [A] E:67 [ALA] 4:142 [A] ✔
1H:63 [SER] 1A:2770 [A] E:67 [ALA] 4:150 [A] ✔
1H:138 [LYS] 1A:2759 [U] E:150 [LEU] 4:139 [U] ✔
1H:138 [LYS] 1A:2760 [G] E:150 [LEU] 4:140 [G] ✔
1H:153 [LYS] 1A:2756 [C] E:165 [LEU] 4:136 [G] ✔
1H:158 [HIS] 1A:2670 [C] E:174 [PHE] 4:53 [C] ✔
1H:139 [GLN] 1A:2758 [C] E:151 [GLU] 4:138 [C] ✔
1H:139 [GLN] 1A:2759 [U] E:151 [GLU] 4:139 [U] ✔
1H:139 [GLN] 1A:2772 [G] E:151 [GLU] 4:152 [G] ✔
1H:85 [LYS] 1A:2758 [C] E:89 [PHE] 4:138 [C] ❌ 6AZ3_E_4
1H:143 [GLN] 1A:2757 [G] E:155 [ARG] 4:137 [G] ❌ 6AZ3_E_4
1H:110 [SER] 1A:2678 [C] E:118 [LYS] 4:61 [A] ❌ 6AZ3_E_4
1H:62 [LYS] 1A:2763 [A] E:66 [ILE] 4:143 [C] ❌ 6AZ3_E_4
1H:158 [HIS] 1A:2671 [G] E:174 [PHE] 4:54 [G] ❌ 6AZ3_E_4
1H:108 [GLY] 1A:2669 [A] E:115 [LEU] 4:52 [A] ❌ 4Y4O_1H_1A
1H:157 [TYR] 1A:2670 [C] E:173 [LYS] 4:53 [C] ❌ 4Y4O_1H_1A
1H:157 [TYR] 1A:2671 [G] E:173 [LYS] 4:54 [G] ❌ 4Y4O_1H_1A
1H:158 [HIS] 1A:2669 [A] E:174 [PHE] 4:52 [A] ❌ 4Y4O_1H_1A
1H:59 [ARG] 1A:2763 [A] E:63 [LYS] 4:143 [C] ❌ 4Y4O_1H_1A
1H:66 [GLY] 1A:2762 [A] E:70 [ASN] 4:142 [A] ❌ 4Y4O_1H_1A
1H:143 [GLN] 1A:2773 [C] E:155 [ARG] 4:153 [C] ❌ 6AZ3_4:153 no longer at interface
1H:139 [GLN] 1A:2773 [C] E:151 [GLU] 4:153 [C] ❌ 6AZ3_4:153 no longer at interface
1H:143 [GLN] 1A:2775 [G] E:155 [ARG] 4:155 [A] ❌ 4Y4O_1A:2775 no longer at interface
1H:92 [ILE] 1A:2668 [U] E:97 [HIS] 4:51 [U] ❌ 4Y4O_1H:92, 4Y4O_1A:2668 no longer at interface
1H:94 [TYR] 1A:2669 [A] E:100 [ILE] 4:52 [A] ❌ 6AZ3_E:100 no longer at interface
1H:164 [TYR] 1A:2758 [C] E:180 [VAL] 4:138 [C] ❌ 6AZ3_E:180 no longer at interface
1H:65 [HIS] 1A:2761 [A] E:69 [LEU] 4:141 [A] ❌ 6AZ3_E:69 no longer at interface
1H:152 [ARG] 1A:2678 [C] E:164 [CYS] 4:61 [A] ❌ 6AZ3_E:164 no longer at interface
1H:140 [LYS] 1A:2758 [C] E:152 [GLN] 4:138 [C] ❌ 6AZ3_E:152 no longer at interface
1H:5 [GLY] 1A:2762 [A] E:7 [LEU] 4:142 [A] ❌ 6AZ3_E:7 no longer at interface
1H:160 [LYS] 1A:2669 [A] E:176 [ASP] 4:52 [A] ❌ 6AZ3_E:176 no longer at interface
1H:160 [LYS] 1A:2670 [C] E:176 [ASP] 4:53 [C] ❌ 6AZ3_E:176 no longer at interface
1H:150 [ALA] 1A:2774 [G] E:162 [GLN] 4:154 [C] ❌ 4Y4O_1H:150 no longer at interface
1H:150 [ALA] 1A:2756 [C] E:162 [GLN] 4:136 [G] ❌ 4Y4O_1H:150 no longer at interface
1H:150 [ALA] 1A:2757 [G] E:162 [GLN] 4:137 [G] ❌ 4Y4O_1H:150 no longer at interface
1H:38 [SER] 1A:2771 [A] E:41 [LEU] 4:151 [A] ❌ 4Y4O_1H:38 no longer at interface
1H:60 [ARG] 1A:2770 [A] E:64 [ILE] 4:150 [A] ❌ 4Y4O_1H:60 no longer at interface
1H:92 [ILE] 1A:2670 [C] E:97 [HIS] 4:53 [C] ❌ 4Y4O_1H:92 no longer at interface
1H:92 [ILE] 1A:2669 [A] E:97 [HIS] 4:52 [A] ❌ 4Y4O_1H:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.82 1.87 0.06 0.8 0.78 0.7 0.91 0.72 0.78 0.21 0.63


Other pairs involving 4Y4O_1H_1A or 6AZ3_E_4

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 6AZ3_E_4 0.84 0.86 1.45 0.45 Ribosomal protein L6 compare
1VQ8_E_0 4Y4O_1H_1A 0.72 0.93 1.67 0.15 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_4 0.85 0.86 1.35 0.42 Ribosomal protein L6 compare
1YHQ_E_0 4Y4O_1H_1A 0.71 0.93 1.96 0.15 Ribosomal protein L6 compare
4Y4O_1H_1A 7RYG_G_A 0.75 0.96 2.99 0.49 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
4Y4O_1H_1A 7O7Y_BH_B5 0.58 0.89 2.14 0.1 Ribosomal protein L6 compare
4Y4O_1H_1A 6AZ3_E_4 0.72 0.82 1.87 0.06 Ribosomal protein L6 compare
4Y4O_1H_1A 7K00_g_a 0.82 0.97 1.64 0.54 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
4Y4O_1H_1A 6S0Z_G_A 0.77 0.97 1.91 0.53 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6AZ3_E_4 6S0Z_G_A 0.63 0.82 2.0 0.18 Ribosomal protein L6 compare
6AZ3_E_4 7K00_g_a 0.73 0.82 1.97 0.15 Ribosomal protein L6 compare
6AZ3_E_4 7O7Y_BH_B5 0.90 0.92 0.54 0.61 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
6AZ3_E_4 7RYG_G_A 0.69 0.81 2.41 0.15 Ribosomal protein L6 compare