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All interfaces > All interologs > Interface groups > group121 > 4Y4O_1H_1A vs 7O7Y_BH_B5

Interface analysis


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Common contacts -

4Y4O_1H
4Y4O_1A
7O7Y_BH
7O7Y_B5
Conserved?
1H:67 [LEU] 1A:2760 [G] BH:72 [THR] B5:4436 [G] ✔
1H:67 [LEU] 1A:2761 [A] BH:72 [THR] B5:4437 [A] ✔
1H:67 [LEU] 1A:2770 [A] BH:72 [THR] B5:4446 [A] ✔
1H:67 [LEU] 1A:2771 [A] BH:72 [THR] B5:4447 [A] ✔
1H:156 [ALA] 1A:2542 [A] BH:173 [ARG] B5:4222 [C] ✔
1H:147 [ASN] 1A:2774 [G] BH:160 [LEU] B5:4450 [C] ✔
1H:146 [ALA] 1A:2757 [G] BH:159 [ALA] B5:4433 [A] ✔
1H:146 [ALA] 1A:2758 [C] BH:159 [ALA] B5:4434 [C] ✔
1H:108 [GLY] 1A:2678 [C] BH:119 [GLY] B5:4357 [A] ✔
1H:157 [TYR] 1A:2543 [A] BH:174 [LYS] B5:4223 [A] ✔
1H:85 [LYS] 1A:2758 [C] BH:90 [TYR] B5:4434 [C] ✔
1H:85 [LYS] 1A:2759 [U] BH:90 [TYR] B5:4435 [PSU] ✔
1H:143 [GLN] 1A:2758 [C] BH:156 [ASN] B5:4434 [C] ✔
1H:143 [GLN] 1A:2774 [G] BH:156 [ASN] B5:4450 [C] ✔
1H:142 [GLY] 1A:2758 [C] BH:155 [SER] B5:4434 [C] ✔
1H:142 [GLY] 1A:2759 [U] BH:155 [SER] B5:4435 [PSU] ✔
1H:70 [THR] 1A:2760 [G] BH:75 [SER] B5:4436 [G] ✔
1H:70 [THR] 1A:2761 [A] BH:75 [SER] B5:4437 [A] ✔
1H:111 [HIS] 1A:2679 [C] BH:122 [TYR] B5:4358 [C] ✔
1H:111 [HIS] 1A:2680 [G] BH:122 [TYR] B5:4359 [C] ✔
1H:66 [GLY] 1A:2760 [G] BH:71 [ARG] B5:4436 [G] ✔
1H:66 [GLY] 1A:2761 [A] BH:71 [ARG] B5:4437 [A] ✔
1H:71 [LEU] 1A:2759 [U] BH:76 [HIS] B5:4435 [PSU] ✔
1H:71 [LEU] 1A:2760 [G] BH:76 [HIS] B5:4436 [G] ✔
1H:71 [LEU] 1A:2771 [A] BH:76 [HIS] B5:4447 [A] ✔
1H:59 [ARG] 1A:1081 [U] BH:64 [ARG] B5:1888 [U] ✔
1H:59 [ARG] 1A:1082 [G] BH:64 [ARG] B5:1889 [U] ✔
1H:59 [ARG] 1A:2762 [A] BH:64 [ARG] B5:4438 [A] ✔
1H:64 [LEU] 1A:2761 [A] BH:69 [THR] B5:4437 [A] ✔
1H:64 [LEU] 1A:2770 [A] BH:69 [THR] B5:4446 [A] ✔
1H:64 [LEU] 1A:2771 [A] BH:69 [THR] B5:4447 [A] ✔
1H:74 [ASN] 1A:2759 [U] BH:79 [ASN] B5:4435 [PSU] ✔
1H:74 [ASN] 1A:2760 [G] BH:79 [ASN] B5:4436 [G] ✔
1H:109 [PHE] 1A:2678 [C] BH:120 [GLU] B5:4357 [A] ✔
1H:109 [PHE] 1A:2679 [C] BH:120 [GLU] B5:4358 [C] ✔
1H:110 [SER] 1A:2665 [U] BH:121 [LYS] B5:4344 [C] ✔
1H:110 [SER] 1A:2679 [C] BH:121 [LYS] B5:4358 [C] ✔
1H:110 [SER] 1A:2680 [G] BH:121 [LYS] B5:4359 [C] ✔
1H:62 [LYS] 1A:2761 [A] BH:67 [LEU] B5:4437 [A] ✔
1H:63 [SER] 1A:2761 [A] BH:68 [ALA] B5:4437 [A] ✔
1H:63 [SER] 1A:2762 [A] BH:68 [ALA] B5:4438 [A] ✔
1H:63 [SER] 1A:2770 [A] BH:68 [ALA] B5:4446 [A] ✔
1H:138 [LYS] 1A:2759 [U] BH:151 [ILE] B5:4435 [PSU] ✔
1H:138 [LYS] 1A:2760 [G] BH:151 [ILE] B5:4436 [G] ✔
1H:158 [HIS] 1A:2543 [A] BH:175 [PHE] B5:4223 [A] ✔
1H:158 [HIS] 1A:2670 [C] BH:175 [PHE] B5:4349 [C] ✔
1H:139 [GLN] 1A:2758 [C] BH:152 [GLU] B5:4434 [C] ✔
1H:139 [GLN] 1A:2759 [U] BH:152 [GLU] B5:4435 [PSU] ✔
1H:139 [GLN] 1A:2772 [G] BH:152 [GLU] B5:4448 [G] ✔
1H:139 [GLN] 1A:2773 [C] BH:152 [GLU] B5:4449 [U] ✔
1H:108 [GLY] 1A:2677 [A] BH:119 [GLY] B5:4356 [A] ❌ 7O7Y_BH_B5
1H:157 [TYR] 1A:2541 [G] BH:174 [LYS] B5:4221 [G] ❌ 7O7Y_BH_B5
1H:157 [TYR] 1A:2542 [A] BH:174 [LYS] B5:4222 [C] ❌ 7O7Y_BH_B5
1H:157 [TYR] 1A:2544 [G] BH:174 [LYS] B5:4224 [G] ❌ 7O7Y_BH_B5
1H:143 [GLN] 1A:2757 [G] BH:156 [ASN] B5:4433 [A] ❌ 7O7Y_BH_B5
1H:143 [GLN] 1A:2773 [C] BH:156 [ASN] B5:4449 [U] ❌ 7O7Y_BH_B5
1H:59 [ARG] 1A:1080 [G] BH:64 [ARG] B5:1887 [G] ❌ 7O7Y_BH_B5
1H:110 [SER] 1A:2678 [C] BH:121 [LYS] B5:4357 [A] ❌ 7O7Y_BH_B5
1H:62 [LYS] 1A:2762 [A] BH:67 [LEU] B5:4438 [A] ❌ 7O7Y_BH_B5
1H:62 [LYS] 1A:2763 [A] BH:67 [LEU] B5:4439 [C] ❌ 7O7Y_BH_B5
1H:158 [HIS] 1A:2671 [G] BH:175 [PHE] B5:4350 [G] ❌ 7O7Y_BH_B5
1H:108 [GLY] 1A:2665 [U] BH:119 [GLY] B5:4344 [C] ❌ 4Y4O_1H_1A
1H:138 [LYS] 1A:2758 [C] BH:151 [ILE] B5:4434 [C] ❌ 4Y4O_1H_1A
1H:156 [ALA] 1A:2543 [A] BH:173 [ARG] B5:4223 [A] ❌ 4Y4O_1H_1A
1H:156 [ALA] 1A:2540 [U] BH:173 [ARG] B5:4220 [A] ❌ 4Y4O_1H_1A
1H:156 [ALA] 1A:2541 [G] BH:173 [ARG] B5:4221 [G] ❌ 4Y4O_1H_1A
1H:157 [TYR] 1A:2671 [G] BH:174 [LYS] B5:4350 [G] ❌ 4Y4O_1H_1A
1H:157 [TYR] 1A:2670 [C] BH:174 [LYS] B5:4349 [C] ❌ 4Y4O_1H_1A
1H:158 [HIS] 1A:2544 [G] BH:175 [PHE] B5:4224 [G] ❌ 4Y4O_1H_1A
1H:158 [HIS] 1A:2669 [A] BH:175 [PHE] B5:4348 [A] ❌ 4Y4O_1H_1A
1H:59 [ARG] 1A:2763 [A] BH:64 [ARG] B5:4439 [C] ❌ 4Y4O_1H_1A
1H:66 [GLY] 1A:2764 [G] BH:71 [ARG] B5:4440 [G] ❌ 4Y4O_1H_1A
1H:66 [GLY] 1A:2762 [A] BH:71 [ARG] B5:4438 [A] ❌ 4Y4O_1H_1A
1H:66 [GLY] 1A:2765 [C] BH:71 [ARG] B5:4441 [C] ❌ 4Y4O_1H_1A
1H:110 [SER] 1A:2666 [A] BH:121 [LYS] B5:4345 [A] ❌ 7O7Y_B5:4345 no longer at interface
1H:6 [ARG] 1A:1158 [G] BH:7 [ASN] B5:1965 [A] ❌ 7O7Y_BH:7, 7O7Y_B5:1965 no longer at interface
1H:110 [SER] 1A:2664 [C] BH:121 [LYS] B5:4343 [U] ❌ 4Y4O_1A:2664 no longer at interface
1H:118 [PRO] 1A:2775 [G] BH:129 [ARG] B5:4451 [A] ❌ 4Y4O_1H:118, 4Y4O_1A:2775 no longer at interface
1H:147 [ASN] 1A:2775 [G] BH:160 [LEU] B5:4451 [A] ❌ 4Y4O_1A:2775 no longer at interface
1H:150 [ALA] 1A:2775 [G] BH:163 [GLN] B5:4451 [A] ❌ 4Y4O_1H:150, 4Y4O_1A:2775 no longer at interface
1H:155 [SER] 1A:2539 [C] BH:172 [ILE] B5:4219 [A] ❌ 4Y4O_1H:155, 4Y4O_1A:2539 no longer at interface
1H:92 [ILE] 1A:2668 [U] BH:98 [HIS] B5:4347 [U] ❌ 4Y4O_1H:92, 4Y4O_1A:2668 no longer at interface
1H:93 [GLY] 1A:2668 [U] BH:99 [PHE] B5:4347 [U] ❌ 4Y4O_1H:93, 4Y4O_1A:2668 no longer at interface
1H:94 [TYR] 1A:2669 [A] BH:100 [PRO] B5:4348 [A] ❌ 7O7Y_BH:100 no longer at interface
1H:164 [TYR] 1A:2758 [C] BH:181 [VAL] B5:4434 [C] ❌ 7O7Y_BH:181 no longer at interface
1H:65 [HIS] 1A:2761 [A] BH:70 [VAL] B5:4437 [A] ❌ 7O7Y_BH:70 no longer at interface
1H:152 [ARG] 1A:2678 [C] BH:165 [THR] B5:4357 [A] ❌ 7O7Y_BH:165 no longer at interface
1H:153 [LYS] 1A:2756 [C] BH:166 [THR] B5:4432 [G] ❌ 7O7Y_BH:166 no longer at interface
1H:140 [LYS] 1A:2758 [C] BH:153 [LEU] B5:4434 [C] ❌ 7O7Y_BH:153 no longer at interface
1H:5 [GLY] 1A:2762 [A] BH:6 [SER] B5:4438 [A] ❌ 7O7Y_BH:6 no longer at interface
1H:160 [LYS] 1A:2669 [A] BH:177 [ASP] B5:4348 [A] ❌ 7O7Y_BH:177 no longer at interface
1H:160 [LYS] 1A:2670 [C] BH:177 [ASP] B5:4349 [C] ❌ 7O7Y_BH:177 no longer at interface
1H:118 [PRO] 1A:2774 [G] BH:129 [ARG] B5:4450 [C] ❌ 4Y4O_1H:118 no longer at interface
1H:150 [ALA] 1A:2757 [G] BH:163 [GLN] B5:4433 [A] ❌ 4Y4O_1H:150 no longer at interface
1H:150 [ALA] 1A:2756 [C] BH:163 [GLN] B5:4432 [G] ❌ 4Y4O_1H:150 no longer at interface
1H:150 [ALA] 1A:2774 [G] BH:163 [GLN] B5:4450 [C] ❌ 4Y4O_1H:150 no longer at interface
1H:155 [SER] 1A:2542 [A] BH:172 [ILE] B5:4222 [C] ❌ 4Y4O_1H:155 no longer at interface
1H:35 [VAL] 1A:2759 [U] BH:36 [ARG] B5:4435 [PSU] ❌ 4Y4O_1H:35 no longer at interface
1H:35 [VAL] 1A:2771 [A] BH:36 [ARG] B5:4447 [A] ❌ 4Y4O_1H:35 no longer at interface
1H:35 [VAL] 1A:2772 [G] BH:36 [ARG] B5:4448 [G] ❌ 4Y4O_1H:35 no longer at interface
1H:38 [SER] 1A:2771 [A] BH:41 [ILE] B5:4447 [A] ❌ 4Y4O_1H:38 no longer at interface
1H:60 [ARG] 1A:1080 [G] BH:65 [LYS] B5:1887 [G] ❌ 4Y4O_1H:60 no longer at interface
1H:60 [ARG] 1A:1081 [U] BH:65 [LYS] B5:1888 [U] ❌ 4Y4O_1H:60 no longer at interface
1H:60 [ARG] 1A:2770 [A] BH:65 [LYS] B5:4446 [A] ❌ 4Y4O_1H:60 no longer at interface
1H:92 [ILE] 1A:2670 [C] BH:98 [HIS] B5:4349 [C] ❌ 4Y4O_1H:92 no longer at interface
1H:92 [ILE] 1A:2669 [A] BH:98 [HIS] B5:4348 [A] ❌ 4Y4O_1H:92 no longer at interface
1H:93 [GLY] 1A:2669 [A] BH:99 [PHE] B5:4348 [A] ❌ 4Y4O_1H:93 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.89 2.14 0.10 0.81 0.89 0.59 0.86 0.58 0.62 0.17 0.58


Other pairs involving 4Y4O_1H_1A or 7O7Y_BH_B5

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 4Y4O_1H_1A 0.72 0.93 1.67 0.15 Ribosomal protein L6 compare
1YHQ_E_0 4Y4O_1H_1A 0.71 0.93 1.96 0.15 Ribosomal protein L6 compare
4Y4O_1H_1A 6AZ3_E_4 0.72 0.82 1.87 0.06 Ribosomal protein L6 compare
4Y4O_1H_1A 6S0Z_G_A 0.77 0.97 1.91 0.53 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
4Y4O_1H_1A 7K00_g_a 0.82 0.97 1.64 0.54 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
1VQ8_E_0 7O7Y_BH_B5 0.81 0.94 2.38 0.55 Ribosomal protein L6 compare
7K00_g_a 7O7Y_BH_B5 0.58 0.9 2.4 0.1 Ribosomal protein L6 compare
6AZ3_E_4 7O7Y_BH_B5 0.90 0.92 0.54 0.61 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
4Y4O_1H_1A 7O7Y_BH_B5 0.58 0.89 2.14 0.1 Ribosomal protein L6 compare
6S0Z_G_A 7O7Y_BH_B5 0.48 0.89 2.89 0.15 Ribosomal protein L6 compare
6AZ3_E_2 7O7Y_BH_B5 0.98 0.92 0.68 0.56 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
1YHQ_E_0 7O7Y_BH_B5 0.82 0.94 2.31 0.54 Ribosomal protein L6 compare
4Y4O_1H_1A 7RYG_G_A 0.75 0.96 2.99 0.49 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare