RNAprotDB

All interfaces > All interologs > Interface groups > group121 > 6AZ3_E_2 vs 6S0Z_G_A

Interface analysis


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Licorice
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Common contacts -

6AZ3_E
6AZ3_2
6S0Z_G
6S0Z_A
Conserved?
E:173 [LYS] 2:1339 [A] G:157 [TYR] A:2558 [A] ✔
E:172 [ARG] 2:1338 [C] G:156 [PRO] A:2557 [U] ✔
E:174 [PHE] 2:1339 [A] G:158 [LYS] A:2558 [A] ❌ 6S0Z_G_A
E:174 [PHE] 2:1340 [G] G:158 [LYS] A:2559 [G] ❌ 6S0Z_G_A
E:172 [ARG] 2:1336 [C] G:156 [PRO] A:2555 [U] ❌ 6S0Z_G_A
E:172 [ARG] 2:1337 [G] G:156 [PRO] A:2556 [G] ❌ 6S0Z_G_A
E:172 [ARG] 2:1339 [A] G:156 [PRO] A:2558 [A] ❌ 6S0Z_G_A
E:171 [ILE] 2:1339 [A] G:155 [GLU] A:2558 [A] ❌ 6AZ3_E_2
E:173 [LYS] 2:1340 [G] G:157 [TYR] A:2559 [G] ❌ 6AZ3_E_2
E:173 [LYS] 2:1338 [C] G:157 [TYR] A:2557 [U] ❌ 6AZ3_E_2
E:173 [LYS] 2:1337 [G] G:157 [TYR] A:2556 [G] ❌ 6AZ3_E_2
E:171 [ILE] 2:1335 [C] G:155 [GLU] A:2554 [C] ❌ 6S0Z_A:2554 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.82 3.69 0.00 0.81 0.82 0.5 0.56 0.42 0.48 0.00 0.10


Other pairs involving 6AZ3_E_2 or 6S0Z_G_A

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 6AZ3_E_2 0.85 0.82 2.44 0.5 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_2 0.83 0.82 2.3 0.5 Ribosomal protein L6 compare
1VQ8_E_0 6S0Z_G_A 0.59 0.93 2.63 0.18 Ribosomal protein L6 compare
6AZ3_E_4 6S0Z_G_A 0.63 0.82 2.0 0.18 Ribosomal protein L6 compare
4Y4O_1H_1A 6S0Z_G_A 0.77 0.97 1.91 0.53 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6AZ3_E_2 6S0Z_G_A 0.42 0.82 3.69 0.0 Ribosomal protein L6 compare
1YHQ_E_0 6S0Z_G_A 0.60 0.93 2.65 0.18 Ribosomal protein L6 compare
6S0Z_G_A 7K00_g_a 0.83 0.97 1.49 0.65 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6AZ3_E_2 7K00_g_a 0.41 0.83 2.88 0.0 Ribosomal protein L6 compare
6S0Z_G_A 7O7Y_BH_B5 0.48 0.89 2.89 0.15 Ribosomal protein L6 compare
6AZ3_E_2 7O7Y_BH_B5 0.98 0.92 0.68 0.56 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
6S0Z_G_A 7RYG_G_A 0.88 0.98 1.9 0.59 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare