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All interfaces > All interologs > Interface groups > group121 > 6AZ3_E_4 vs 6S0Z_G_A

Interface analysis


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Common contacts -

6AZ3_E
6AZ3_4
6S0Z_G
6S0Z_A
Conserved?
E:89 [PHE] 4:139 [U] G:85 [LYS] A:2773 [U] ✔
E:155 [ARG] 4:138 [C] G:143 [ALA] A:2772 [C] ✔
E:68 [CYS] 4:141 [A] G:64 [ASN] A:2775 [A] ✔
E:68 [CYS] 4:150 [A] G:64 [ASN] A:2784 [A] ✔
E:68 [CYS] 4:151 [A] G:64 [ASN] A:2785 [A] ✔
E:78 [ASN] 4:139 [U] G:74 [ASN] A:2773 [U] ✔
E:78 [ASN] 4:140 [G] G:74 [ASN] A:2774 [G] ✔
E:117 [GLU] 4:61 [A] G:109 [TYR] A:2693 [C] ✔
E:117 [GLU] 4:62 [C] G:109 [TYR] A:2694 [C] ✔
E:63 [LYS] 4:142 [A] G:59 [LYS] A:2776 [A] ✔
E:74 [ALA] 4:140 [G] G:70 [ALA] A:2774 [G] ✔
E:74 [ALA] 4:141 [A] G:70 [ALA] A:2775 [A] ✔
E:71 [THR] 4:140 [G] G:67 [THR] A:2774 [G] ✔
E:71 [THR] 4:141 [A] G:67 [THR] A:2775 [A] ✔
E:71 [THR] 4:150 [A] G:67 [THR] A:2784 [A] ✔
E:154 [SER] 4:138 [C] G:142 [GLY] A:2772 [C] ✔
E:70 [ASN] 4:140 [G] G:66 [GLY] A:2774 [G] ✔
E:70 [ASN] 4:141 [A] G:66 [GLY] A:2775 [A] ✔
E:118 [LYS] 4:48 [U] G:110 [SER] A:2680 [U] ✔
E:118 [LYS] 4:49 [A] G:110 [SER] A:2681 [A] ✔
E:118 [LYS] 4:62 [C] G:110 [SER] A:2694 [C] ✔
E:118 [LYS] 4:63 [U] G:110 [SER] A:2695 [G] ✔
E:150 [LEU] 4:139 [U] G:138 [LYS] A:2773 [U] ✔
E:150 [LEU] 4:140 [G] G:138 [LYS] A:2774 [G] ✔
E:67 [ALA] 4:141 [A] G:63 [THR] A:2775 [A] ✔
E:67 [ALA] 4:142 [A] G:63 [THR] A:2776 [A] ✔
E:67 [ALA] 4:150 [A] G:63 [THR] A:2784 [A] ✔
E:75 [HIS] 4:139 [U] G:71 [LEU] A:2773 [U] ✔
E:75 [HIS] 4:151 [A] G:71 [LEU] A:2785 [A] ✔
E:151 [GLU] 4:138 [C] G:139 [GLU] A:2772 [C] ✔
E:151 [GLU] 4:139 [U] G:139 [GLU] A:2773 [U] ✔
E:119 [ARG] 4:62 [C] G:111 [HIS] A:2694 [C] ✔
E:119 [ARG] 4:63 [U] G:111 [HIS] A:2695 [G] ✔
E:116 [GLY] 4:61 [A] G:108 [GLY] A:2693 [C] ✔
E:158 [ALA] 4:137 [G] G:146 [SER] A:2771 [G] ✔
E:158 [ALA] 4:138 [C] G:146 [SER] A:2772 [C] ✔
E:174 [PHE] 4:53 [C] G:158 [LYS] A:2685 [C] ✔
E:159 [VAL] 4:154 [C] G:147 [ASN] A:2788 [A] ✔
E:66 [ILE] 4:141 [A] G:62 [ARG] A:2775 [A] ✔
E:66 [ILE] 4:142 [A] G:62 [ARG] A:2776 [A] ✔
E:155 [ARG] 4:154 [C] G:143 [ALA] A:2788 [A] ❌ 6S0Z_G_A
E:63 [LYS] 4:143 [C] G:59 [LYS] A:2777 [A] ❌ 6S0Z_G_A
E:71 [THR] 4:151 [A] G:67 [THR] A:2785 [A] ❌ 6S0Z_G_A
E:154 [SER] 4:139 [U] G:142 [GLY] A:2773 [U] ❌ 6S0Z_G_A
E:70 [ASN] 4:142 [A] G:66 [GLY] A:2776 [A] ❌ 6S0Z_G_A
E:173 [LYS] 4:53 [C] G:157 [TYR] A:2685 [C] ❌ 6S0Z_G_A
E:173 [LYS] 4:54 [G] G:157 [TYR] A:2686 [G] ❌ 6S0Z_G_A
E:75 [HIS] 4:140 [G] G:71 [LEU] A:2774 [G] ❌ 6S0Z_G_A
E:151 [GLU] 4:152 [G] G:139 [GLU] A:2786 [G] ❌ 6S0Z_G_A
E:116 [GLY] 4:48 [U] G:108 [GLY] A:2680 [U] ❌ 6S0Z_G_A
E:116 [GLY] 4:62 [C] G:108 [GLY] A:2694 [C] ❌ 6S0Z_G_A
E:174 [PHE] 4:52 [A] G:158 [LYS] A:2684 [A] ❌ 6S0Z_G_A
E:116 [GLY] 4:60 [A] G:108 [GLY] A:2692 [A] ❌ 6AZ3_E_4
E:117 [GLU] 4:48 [U] G:109 [TYR] A:2680 [U] ❌ 6AZ3_E_4
E:118 [LYS] 4:61 [A] G:110 [SER] A:2693 [C] ❌ 6AZ3_E_4
E:150 [LEU] 4:138 [C] G:138 [LYS] A:2772 [C] ❌ 6AZ3_E_4
E:174 [PHE] 4:54 [G] G:158 [LYS] A:2686 [G] ❌ 6AZ3_E_4
E:66 [ILE] 4:143 [C] G:62 [ARG] A:2777 [A] ❌ 6AZ3_E_4
E:155 [ARG] 4:155 [A] G:143 [ALA] A:2789 [U] ❌ 6S0Z_A:2789 no longer at interface
E:162 [GLN] 4:136 [G] G:150 [SER] A:2770 [U] ❌ 6S0Z_G:150, 6S0Z_A:2770 no longer at interface
E:165 [LEU] 4:136 [G] G:153 [PRO] A:2770 [U] ❌ 6S0Z_G:153, 6S0Z_A:2770 no longer at interface
E:97 [HIS] 4:51 [U] G:92 [VAL] A:2683 [U] ❌ 6S0Z_G:92, 6S0Z_A:2683 no longer at interface
E:6 [SER] 4:144 [G] G:4 [VAL] A:2778 [G] ❌ 6AZ3_E:6, 6AZ3_4:144 no longer at interface
E:6 [SER] 4:145 [C] G:4 [VAL] A:2779 [C] ❌ 6AZ3_E:6, 6AZ3_4:145 no longer at interface
E:64 [ILE] 4:150 [A] G:60 [GLU] A:2784 [A] ❌ 6S0Z_G:60 no longer at interface
E:162 [GLN] 4:137 [G] G:150 [SER] A:2771 [G] ❌ 6S0Z_G:150 no longer at interface
E:162 [GLN] 4:154 [C] G:150 [SER] A:2788 [A] ❌ 6S0Z_G:150 no longer at interface
E:97 [HIS] 4:52 [A] G:92 [VAL] A:2684 [A] ❌ 6S0Z_G:92 no longer at interface
E:97 [HIS] 4:53 [C] G:92 [VAL] A:2685 [C] ❌ 6S0Z_G:92 no longer at interface
E:152 [GLN] 4:138 [C] G:140 [GLN] A:2772 [C] ❌ 6AZ3_E:152 no longer at interface
E:164 [CYS] 4:61 [A] G:152 [ARG] A:2693 [C] ❌ 6AZ3_E:164 no longer at interface
E:176 [ASP] 4:53 [C] G:160 [LYS] A:2685 [C] ❌ 6AZ3_E:176 no longer at interface
E:176 [ASP] 4:52 [A] G:160 [LYS] A:2684 [A] ❌ 6AZ3_E:176 no longer at interface
E:36 [LYS] 4:152 [G] G:35 [ARG] A:2786 [G] ❌ 6AZ3_E:36 no longer at interface
E:6 [SER] 4:142 [A] G:4 [VAL] A:2776 [A] ❌ 6AZ3_E:6 no longer at interface
E:6 [SER] 4:141 [A] G:4 [VAL] A:2775 [A] ❌ 6AZ3_E:6 no longer at interface
E:100 [ILE] 4:52 [A] G:94 [TYR] A:2684 [A] ❌ 6AZ3_E:100 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L6 0.82 2.0 0.18 0.81 0.78 0.67 0.87 0.63 0.67 0.23 0.51


Other pairs involving 6AZ3_E_4 or 6S0Z_G_A

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_E_0 6S0Z_G_A 0.59 0.93 2.63 0.18 Ribosomal protein L6 compare
1VQ8_E_0 6AZ3_E_4 0.84 0.86 1.45 0.45 Ribosomal protein L6 compare
6AZ3_E_4 6S0Z_G_A 0.63 0.82 2.0 0.18 Ribosomal protein L6 compare
6AZ3_E_4 7K00_g_a 0.73 0.82 1.97 0.15 Ribosomal protein L6 compare
6AZ3_E_4 7O7Y_BH_B5 0.90 0.92 0.54 0.61 Ribosomal protein L6 Eukaryotic large subunit ribosomal RNA compare
6AZ3_E_4 7RYG_G_A 0.69 0.81 2.41 0.15 Ribosomal protein L6 compare
4Y4O_1H_1A 6AZ3_E_4 0.72 0.82 1.87 0.06 Ribosomal protein L6 compare
4Y4O_1H_1A 6S0Z_G_A 0.77 0.97 1.91 0.53 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6S0Z_G_A 7O7Y_BH_B5 0.48 0.89 2.89 0.15 Ribosomal protein L6 compare
6S0Z_G_A 7RYG_G_A 0.88 0.98 1.9 0.59 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6S0Z_G_A 7K00_g_a 0.83 0.97 1.49 0.65 Ribosomal protein L6 Bacterial large subunit ribosomal RNA compare
6AZ3_E_2 6S0Z_G_A 0.42 0.82 3.69 0.0 Ribosomal protein L6 compare
1YHQ_E_0 6AZ3_E_4 0.85 0.86 1.35 0.42 Ribosomal protein L6 compare
1YHQ_E_0 6S0Z_G_A 0.60 0.93 2.65 0.18 Ribosomal protein L6 compare