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All interfaces > All interologs > Interface groups > group122 > 1VQ8_N_0 vs 7O7Y_BD_B5

Interface analysis


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Common contacts -

1VQ8_N
1VQ8_0
7O7Y_BD
7O7Y_B5
Conserved?
N:4 [PRO] 0:961 [A] BD:14 [LYS] B5:1681 [A] ✔
N:20 [TYR] 0:2368 [A] BD:30 [TYR] B5:4026 [A] ✔
N:18 [THR] 0:2368 [A] BD:28 [THR] B5:4026 [A] ✔
N:8 [VAL] 0:2353 [A] BD:18 [VAL] B5:4011 [U] ✔
N:102 [LEU] 0:2413 [A] BD:146 [LEU] B5:4069 [A] ✔
N:102 [LEU] 0:2414 [A] BD:146 [LEU] B5:4070 [A] ✔
N:7 [LYS] 0:2353 [A] BD:17 [GLN] B5:4011 [U] ✔
N:22 [GLN] 0:2415 [A] BD:32 [ALA] B5:4071 [A] ✔
N:101 [VAL] 0:2414 [A] BD:145 [TYR] B5:4070 [A] ✔
N:101 [VAL] 0:2415 [A] BD:145 [TYR] B5:4071 [A] ✔
N:108 [SER] 0:2328 [U] BD:152 [ARG] B5:3986 [G] ✔
N:6 [TYR] 0:2353 [A] BD:16 [TYR] B5:4011 [U] ✔
N:135 [VAL] 0:2413 [A] BD:179 [ARG] B5:4069 [A] ✔
N:5 [ARG] 0:961 [A] BD:15 [ARG] B5:1681 [A] ✔
N:5 [ARG] 0:962 [C] BD:15 [ARG] B5:1682 [A] ✔
N:5 [ARG] 0:1009 [U] BD:15 [ARG] B5:1729 [U] ✔
N:5 [ARG] 0:1010 [C] BD:15 [ARG] B5:1730 [U] ✔
N:29 [SER] 0:2416 [G] BD:40 [ASP] B5:4072 [G] ✔
N:13 [ARG] 0:2368 [A] BD:23 [ARG] B5:4026 [A] ✔
N:104 [ILE] 0:2413 [A] BD:148 [ALA] B5:4069 [A] ✔
N:132 [ASN] 0:2413 [A] BD:175 [HIS] B5:4069 [A] ✔
N:132 [ASN] 0:2414 [A] BD:175 [HIS] B5:4070 [A] ✔
N:106 [LEU] 0:2368 [A] BD:150 [LEU] B5:4026 [A] ✔
N:19 [ASP] 0:2368 [A] BD:29 [ASP] B5:4026 [A] ✔
N:19 [ASP] 0:2369 [A] BD:29 [ASP] B5:4027 [A] ✔
N:21 [HIS] 0:2369 [A] BD:31 [TYR] B5:4027 [A] ✔
N:21 [HIS] 0:2370 [A] BD:31 [TYR] B5:4028 [A] ✔
N:25 [ARG] 0:2415 [A] BD:35 [ARG] B5:4071 [A] ✔
N:25 [ARG] 0:2416 [G] BD:35 [ARG] B5:4072 [G] ✔
N:17 [ARG] 0:2368 [A] BD:27 [LYS] B5:4026 [A] ✔
N:131 [HIS] 0:2413 [A] BD:174 [PRO] B5:4069 [A] ✔
N:131 [HIS] 0:2414 [A] BD:174 [PRO] B5:4070 [A] ✔
N:116 [PHE] 0:2413 [A] BD:160 [PHE] B5:4069 [A] ✔
N:109 [PRO] 0:2413 [A] BD:153 [THR] B5:4069 [A] ✔
N:9 [PRO] 0:2353 [A] BD:19 [LYS] B5:4011 [U] ✔
N:26 [LEU] 0:2414 [A] BD:36 [LEU] B5:4070 [A] ✔
N:26 [LEU] 0:2415 [A] BD:36 [LEU] B5:4071 [A] ✔
N:12 [ARG] 0:2368 [A] BD:22 [ARG] B5:4026 [A] ✔
N:16 [ALA] 0:2368 [A] BD:26 [GLY] B5:4026 [A] ✔
N:4 [PRO] 0:1010 [C] BD:14 [LYS] B5:1730 [U] ❌ 7O7Y_BD_B5
N:22 [GLN] 0:2413 [A] BD:32 [ALA] B5:4069 [A] ❌ 7O7Y_BD_B5
N:22 [GLN] 0:2414 [A] BD:32 [ALA] B5:4070 [A] ❌ 7O7Y_BD_B5
N:6 [TYR] 0:2354 [A] BD:16 [TYR] B5:4012 [G] ❌ 7O7Y_BD_B5
N:5 [ARG] 0:2354 [A] BD:15 [ARG] B5:4012 [G] ❌ 7O7Y_BD_B5
N:29 [SER] 0:2415 [A] BD:40 [ASP] B5:4071 [A] ❌ 7O7Y_BD_B5
N:13 [ARG] 0:2353 [A] BD:23 [ARG] B5:4011 [U] ❌ 7O7Y_BD_B5
N:21 [HIS] 0:2367 [A] BD:31 [TYR] B5:4025 [A] ❌ 7O7Y_BD_B5
N:21 [HIS] 0:2368 [A] BD:31 [TYR] B5:4026 [A] ❌ 7O7Y_BD_B5
N:25 [ARG] 0:2414 [A] BD:35 [ARG] B5:4070 [A] ❌ 7O7Y_BD_B5
N:109 [PRO] 0:2327 [A] BD:153 [THR] B5:3985 [A] ❌ 7O7Y_BD_B5
N:109 [PRO] 0:2328 [U] BD:153 [THR] B5:3986 [G] ❌ 7O7Y_BD_B5
N:101 [VAL] 0:2416 [G] BD:145 [TYR] B5:4072 [G] ❌ 1VQ8_N_0
N:5 [ARG] 0:2353 [A] BD:15 [ARG] B5:4011 [U] ❌ 1VQ8_N_0
N:106 [LEU] 0:2328 [U] BD:150 [LEU] B5:3986 [G] ❌ 1VQ8_N_0
N:108 [SER] 0:2327 [A] BD:152 [ARG] B5:3985 [A] ❌ 1VQ8_N_0
N:131 [HIS] 0:2415 [A] BD:174 [PRO] B5:4071 [A] ❌ 1VQ8_N_0
N:9 [PRO] 0:2368 [A] BD:19 [LYS] B5:4026 [A] ❌ 1VQ8_N_0
N:9 [PRO] 0:2367 [A] BD:19 [LYS] B5:4025 [A] ❌ 1VQ8_N_0
N:9 [PRO] 0:2354 [A] BD:19 [LYS] B5:4012 [G] ❌ 1VQ8_N_0
N:13 [ARG] 0:2367 [A] BD:23 [ARG] B5:4025 [A] ❌ 1VQ8_N_0
N:25 [ARG] 0:2370 [A] BD:35 [ARG] B5:4028 [A] ❌ 1VQ8_N_0
N:28 [LYS] 0:2417 [C] BD:39 [GLN] B5:4073 [C] ❌ 7O7Y_BD:39, 7O7Y_B5:4073 no longer at interface
N:1 [ALA] 0:1000 [C] BD:10 [LYS] B5:1720 [PSU] ❌ 1VQ8_N:1, 1VQ8_0:1000 no longer at interface
N:1 [ALA] 0:960 [G] BD:10 [LYS] B5:1680 [G] ❌ 1VQ8_N:1, 1VQ8_0:960 no longer at interface
N:2 [THR] 0:2352 [G] BD:12 [TYR] B5:4010 [G] ❌ 1VQ8_N:2, 1VQ8_0:2352 no longer at interface
N:135 [VAL] 0:2412 [G] BD:179 [ARG] B5:4068 [G] ❌ 1VQ8_0:2412 no longer at interface
N:21 [HIS] 0:2326 [U] BD:31 [TYR] B5:3984 [G] ❌ 1VQ8_0:2326 no longer at interface
N:25 [ARG] 0:2326 [U] BD:35 [ARG] B5:3984 [G] ❌ 1VQ8_0:2326 no longer at interface
N:27 [LEU] 0:2415 [A] BD:38 [ILE] B5:4071 [A] ❌ 7O7Y_BD:38 no longer at interface
N:28 [LYS] 0:2415 [A] BD:39 [GLN] B5:4071 [A] ❌ 7O7Y_BD:39 no longer at interface
N:28 [LYS] 0:2416 [G] BD:39 [GLN] B5:4072 [G] ❌ 7O7Y_BD:39 no longer at interface
N:130 [PRO] 0:2414 [A] BD:173 [ILE] B5:4070 [A] ❌ 7O7Y_BD:173 no longer at interface
N:130 [PRO] 0:2415 [A] BD:173 [ILE] B5:4071 [A] ❌ 7O7Y_BD:173 no longer at interface
N:1 [ALA] 0:961 [A] BD:10 [LYS] B5:1681 [A] ❌ 1VQ8_N:1 no longer at interface
N:2 [THR] 0:2353 [A] BD:12 [TYR] B5:4011 [U] ❌ 1VQ8_N:2 no longer at interface
N:107 [ASN] 0:2328 [U] BD:151 [ALA] B5:3986 [G] ❌ 1VQ8_N:107 no longer at interface
N:133 [ASP] 0:2414 [A] BD:176 [SER] B5:4070 [A] ❌ 1VQ8_N:133 no longer at interface
N:133 [ASP] 0:2413 [A] BD:176 [SER] B5:4069 [A] ❌ 1VQ8_N:133 no longer at interface
N:32 [PRO] 0:2415 [A] BD:48 [LYS] B5:4071 [A] ❌ 1VQ8_N:32 no longer at interface
N:32 [PRO] 0:2416 [G] BD:48 [LYS] B5:4072 [G] ❌ 1VQ8_N:32 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.94 3.15 0.42 0.91 0.94 0.9 0.94 0.71 0.78 0.28 0.46


Other pairs involving 1VQ8_N_0 or 7O7Y_BD_B5

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1S_1A 7O7Y_BD_B5 0.36 0.89 4.42 0.04 Ribonuclease H-like compare
6AZ3_O_2 7O7Y_BD_B5 0.93 0.92 0.85 0.68 Ribonuclease H-like Eukaryotic large subunit ribosomal RNA compare
6S0Z_M_A 7O7Y_BD_B5 0.26 0.89 4.78 0.05 Ribonuclease H-like compare
6AZ3_O_1 7O7Y_BD_B5 0.65 0.93 1.41 0.33 Ribonuclease H-like Eukaryotic large subunit ribosomal RNA compare
1YHQ_N_0 7O7Y_BD_B5 0.71 0.94 3.12 0.42 Ribonuclease H-like compare
1VQ8_N_0 6S0Z_M_A 0.30 0.91 3.95 0.14 Ribonuclease H-like compare
1VQ8_N_0 1YHQ_N_0 1.00 1.0 0.17 1.0 Ribonuclease H-like Archaeal large subunit ribosomal RNA compare
1VQ8_N_0 7RYG_N_A 0.17 0.92 5.13 0.05 Ribonuclease H-like compare
1VQ8_N_0 7K00_n_a 0.41 0.9 3.76 0.1 Ribonuclease H-like compare
1VQ8_N_0 6AZ3_O_2 0.80 0.79 1.53 0.42 Ribonuclease H-like compare
1VQ8_N_0 7O7Y_BD_B5 0.71 0.94 3.15 0.42 Ribonuclease H-like compare
1VQ8_N_0 4Y4O_1S_1A 0.37 0.91 4.22 0.09 Ribonuclease H-like compare