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All interfaces > All interologs > Interface groups > group122 > 1YHQ_N_0 vs 6AZ3_O_2

Interface analysis


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Common contacts -

1YHQ_N
1YHQ_0
6AZ3_O
6AZ3_2
Conserved?
N:20 [TYR] 0:2368 [A] O:30 [TYR] 2:1131 [A] ✔
N:18 [THR] 0:2368 [A] O:28 [THR] 2:1131 [A] ✔
N:8 [VAL] 0:2353 [A] O:18 [VAL] 2:1116 [U] ✔
N:102 [LEU] 0:2413 [A] O:152 [LEU] 2:1175 [A] ✔
N:102 [LEU] 0:2414 [A] O:152 [LEU] 2:1176 [A] ✔
N:7 [LYS] 0:2353 [A] O:17 [GLN] 2:1116 [U] ✔
N:22 [GLN] 0:2415 [A] O:32 [ALA] 2:1177 [A] ✔
N:101 [VAL] 0:2414 [A] O:151 [ILE] 2:1176 [A] ✔
N:101 [VAL] 0:2415 [A] O:151 [ILE] 2:1177 [A] ✔
N:108 [SER] 0:2328 [U] O:158 [ARG] 2:1091 [G] ✔
N:6 [TYR] 0:2353 [A] O:16 [PHE] 2:1116 [U] ✔
N:135 [VAL] 0:2413 [A] O:185 [ARG] 2:1175 [A] ✔
N:29 [SER] 0:2416 [G] O:39 [GLN] 2:1178 [G] ✔
N:13 [ARG] 0:2368 [A] O:23 [ARG] 2:1131 [A] ✔
N:104 [ILE] 0:2413 [A] O:154 [VAL] 2:1175 [A] ✔
N:132 [ASN] 0:2413 [A] O:182 [ARG] 2:1175 [A] ✔
N:132 [ASN] 0:2414 [A] O:182 [ARG] 2:1176 [A] ✔
N:106 [LEU] 0:2368 [A] O:156 [LEU] 2:1131 [A] ✔
N:19 [ASP] 0:2368 [A] O:29 [ASP] 2:1131 [A] ✔
N:19 [ASP] 0:2369 [A] O:29 [ASP] 2:1132 [A] ✔
N:21 [HIS] 0:2369 [A] O:31 [HIS] 2:1132 [A] ✔
N:21 [HIS] 0:2370 [A] O:31 [HIS] 2:1133 [A] ✔
N:27 [LEU] 0:2415 [A] O:37 [VAL] 2:1177 [A] ✔
N:25 [ARG] 0:2415 [A] O:35 [GLN] 2:1177 [A] ✔
N:25 [ARG] 0:2416 [G] O:35 [GLN] 2:1178 [G] ✔
N:17 [ARG] 0:2368 [A] O:27 [LYS] 2:1131 [A] ✔
N:131 [HIS] 0:2413 [A] O:181 [HIS] 2:1175 [A] ✔
N:131 [HIS] 0:2414 [A] O:181 [HIS] 2:1176 [A] ✔
N:116 [PHE] 0:2413 [A] O:166 [PHE] 2:1175 [A] ✔
N:109 [PRO] 0:2413 [A] O:159 [THR] 2:1175 [A] ✔
N:9 [PRO] 0:2353 [A] O:19 [LYS] 2:1116 [U] ✔
N:28 [LYS] 0:2415 [A] O:38 [LEU] 2:1177 [A] ✔
N:28 [LYS] 0:2416 [G] O:38 [LEU] 2:1178 [G] ✔
N:28 [LYS] 0:2417 [C] O:38 [LEU] 2:1179 [C] ✔
N:26 [LEU] 0:2414 [A] O:36 [MET] 2:1176 [A] ✔
N:26 [LEU] 0:2415 [A] O:36 [MET] 2:1177 [A] ✔
N:12 [ARG] 0:2368 [A] O:22 [ARG] 2:1131 [A] ✔
N:130 [PRO] 0:2413 [A] O:180 [PRO] 2:1175 [A] ✔
N:130 [PRO] 0:2414 [A] O:180 [PRO] 2:1176 [A] ✔
N:130 [PRO] 0:2415 [A] O:180 [PRO] 2:1177 [A] ✔
N:16 [ALA] 0:2368 [A] O:26 [GLY] 2:1131 [A] ✔
N:22 [GLN] 0:2413 [A] O:32 [ALA] 2:1175 [A] ❌ 6AZ3_O_2
N:22 [GLN] 0:2414 [A] O:32 [ALA] 2:1176 [A] ❌ 6AZ3_O_2
N:6 [TYR] 0:2352 [G] O:16 [PHE] 2:1115 [G] ❌ 6AZ3_O_2
N:6 [TYR] 0:2354 [A] O:16 [PHE] 2:1117 [A] ❌ 6AZ3_O_2
N:29 [SER] 0:2415 [A] O:39 [GLN] 2:1177 [A] ❌ 6AZ3_O_2
N:13 [ARG] 0:2353 [A] O:23 [ARG] 2:1116 [U] ❌ 6AZ3_O_2
N:21 [HIS] 0:2367 [A] O:31 [HIS] 2:1130 [A] ❌ 6AZ3_O_2
N:21 [HIS] 0:2368 [A] O:31 [HIS] 2:1131 [A] ❌ 6AZ3_O_2
N:25 [ARG] 0:2414 [A] O:35 [GLN] 2:1176 [A] ❌ 6AZ3_O_2
N:109 [PRO] 0:2327 [A] O:159 [THR] 2:1090 [A] ❌ 6AZ3_O_2
N:109 [PRO] 0:2328 [U] O:159 [THR] 2:1091 [G] ❌ 6AZ3_O_2
N:5 [ARG] 0:2354 [A] O:15 [ARG] 2:1117 [A] ❌ 1YHQ_N_0
N:5 [ARG] 0:2353 [A] O:15 [ARG] 2:1116 [U] ❌ 1YHQ_N_0
N:106 [LEU] 0:2328 [U] O:156 [LEU] 2:1091 [G] ❌ 1YHQ_N_0
N:108 [SER] 0:2327 [A] O:158 [ARG] 2:1090 [A] ❌ 1YHQ_N_0
N:9 [PRO] 0:2354 [A] O:19 [LYS] 2:1117 [A] ❌ 1YHQ_N_0
N:9 [PRO] 0:2367 [A] O:19 [LYS] 2:1130 [A] ❌ 1YHQ_N_0
N:9 [PRO] 0:2368 [A] O:19 [LYS] 2:1131 [A] ❌ 1YHQ_N_0
N:13 [ARG] 0:2367 [A] O:23 [ARG] 2:1130 [A] ❌ 1YHQ_N_0
N:25 [ARG] 0:2417 [C] O:35 [GLN] 2:1179 [C] ❌ 1YHQ_N_0
N:108 [SER] 0:2329 [C] O:158 [ARG] 2:1092 [C] ❌ 1YHQ_0:2329 no longer at interface
N:132 [ASN] 0:2412 [G] O:182 [ARG] 2:1174 [G] ❌ 1YHQ_0:2412 no longer at interface
N:1 [ALA] 0:2351 [C] O:8 [LYS] 2:1114 [C] ❌ 1YHQ_N:1, 1YHQ_0:2351 no longer at interface
N:2 [THR] 0:2352 [G] O:12 [TYR] 2:1115 [G] ❌ 1YHQ_N:2 no longer at interface
N:2 [THR] 0:2353 [A] O:12 [TYR] 2:1116 [U] ❌ 1YHQ_N:2 no longer at interface
N:99 [GLU] 0:2415 [A] O:149 [LYS] 2:1177 [A] ❌ 1YHQ_N:99 no longer at interface
N:119 [GLN] 0:2413 [A] O:169 [LEU] 2:1175 [A] ❌ 1YHQ_N:119 no longer at interface
N:134 [ASP] 0:2413 [A] O:184 [ASN] 2:1175 [A] ❌ 1YHQ_N:134 no longer at interface
N:30 [GLY] 0:2416 [G] O:40 [ASP] 2:1178 [G] ❌ 1YHQ_N:30 no longer at interface
N:31 [LYS] 0:2416 [G] O:48 [LYS] 2:1178 [G] ❌ 1YHQ_N:31 no longer at interface
N:31 [LYS] 0:2415 [A] O:48 [LYS] 2:1177 [A] ❌ 1YHQ_N:31 no longer at interface
N:1 [ALA] 0:2352 [G] O:8 [LYS] 2:1115 [G] ❌ 1YHQ_N:1 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.79 1.52 0.42 0.91 0.81 0.97 0.78 0.80 0.82 0.39 0.38


Other pairs involving 1YHQ_N_0 or 6AZ3_O_2

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1S_1A 6AZ3_O_2 0.40 0.75 4.24 0.0 Ribonuclease H-like compare
6AZ3_O_2 7RYG_N_A 0.22 0.74 3.63 0.0 Ribonuclease H-like compare
6AZ3_O_2 7O7Y_BD_B5 0.93 0.92 0.85 0.68 Ribonuclease H-like Eukaryotic large subunit ribosomal RNA compare
6AZ3_O_2 7K00_n_a 0.46 0.75 2.27 0.05 Ribonuclease H-like compare
6AZ3_O_2 6S0Z_M_A 0.37 0.75 3.35 0.05 Ribonuclease H-like compare
1YHQ_N_0 6AZ3_O_2 0.80 0.79 1.52 0.42 Ribonuclease H-like compare
1YHQ_N_0 7RYG_N_A 0.17 0.92 5.16 0.05 Ribonuclease H-like compare
1YHQ_N_0 7O7Y_BD_B5 0.71 0.94 3.12 0.42 Ribonuclease H-like compare
1YHQ_N_0 6S0Z_M_A 0.30 0.91 3.99 0.14 Ribonuclease H-like compare
1YHQ_N_0 7K00_n_a 0.41 0.9 3.76 0.1 Ribonuclease H-like compare
1YHQ_N_0 4Y4O_1S_1A 0.37 0.91 4.27 0.09 Ribonuclease H-like compare
1VQ8_N_0 1YHQ_N_0 1.00 1.0 0.17 1.0 Ribonuclease H-like Archaeal large subunit ribosomal RNA compare
1VQ8_N_0 6AZ3_O_2 0.80 0.79 1.53 0.42 Ribonuclease H-like compare