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All interfaces > All interologs > Interface groups > group122 > 1YHQ_N_0 vs 7RYG_N_A

Interface analysis


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Common contacts -

1YHQ_N
1YHQ_0
7RYG_N
7RYG_A
Conserved?
N:20 [TYR] 0:2368 [A] N:14 [SER] A:2330 [A] ✔
N:102 [LEU] 0:2413 [A] N:91 [PHE] A:2372 [A] ✔
N:102 [LEU] 0:2414 [A] N:91 [PHE] A:2373 [A] ✔
N:101 [VAL] 0:2415 [A] N:90 [ALA] A:2374 [A] ✔
N:104 [ILE] 0:2413 [A] N:93 [ARG] A:2372 [A] ✔
N:19 [ASP] 0:2368 [A] N:13 [LYS] A:2330 [A] ✔
N:25 [ARG] 0:2415 [A] N:19 [ILE] A:2374 [A] ✔
N:101 [VAL] 0:2414 [A] N:90 [ALA] A:2373 [A] ❌ 7RYG_N_A
N:106 [LEU] 0:2368 [A] N:95 [GLY] A:2330 [A] ❌ 7RYG_N_A
N:19 [ASP] 0:2369 [A] N:13 [LYS] A:2331 [A] ❌ 7RYG_N_A
N:21 [HIS] 0:2367 [A] N:15 [THR] A:2329 [A] ❌ 7RYG_N_A
N:21 [HIS] 0:2368 [A] N:15 [THR] A:2330 [A] ❌ 7RYG_N_A
N:21 [HIS] 0:2369 [A] N:15 [THR] A:2331 [A] ❌ 7RYG_N_A
N:27 [LEU] 0:2415 [A] N:21 [ALA] A:2374 [A] ❌ 7RYG_N_A
N:25 [ARG] 0:2414 [A] N:19 [ILE] A:2373 [A] ❌ 7RYG_N_A
N:25 [ARG] 0:2416 [G] N:19 [ILE] A:2375 [G] ❌ 7RYG_N_A
N:17 [ARG] 0:2368 [A] N:11 [ARG] A:2330 [A] ❌ 7RYG_N_A
N:16 [ALA] 0:2368 [A] N:10 [ARG] A:2330 [A] ❌ 7RYG_N_A
N:16 [ALA] 0:2367 [A] N:10 [ARG] A:2329 [A] ❌ 1YHQ_N_0
N:16 [ALA] 0:2369 [A] N:10 [ARG] A:2331 [A] ❌ 1YHQ_N_0
N:17 [ARG] 0:2328 [U] N:11 [ARG] A:2290 [G] ❌ 1YHQ_N_0
N:19 [ASP] 0:2367 [A] N:13 [LYS] A:2329 [A] ❌ 1YHQ_N_0
N:20 [TYR] 0:2369 [A] N:14 [SER] A:2331 [A] ❌ 1YHQ_N_0
N:21 [HIS] 0:2415 [A] N:15 [THR] A:2374 [A] ❌ 1YHQ_N_0
N:21 [HIS] 0:2327 [A] N:15 [THR] A:2289 [C] ❌ 1YHQ_N_0
N:27 [LEU] 0:2368 [A] N:21 [ALA] A:2330 [A] ❌ 1YHQ_N_0
N:104 [ILE] 0:2328 [U] N:93 [ARG] A:2290 [G] ❌ 1YHQ_N_0
N:104 [ILE] 0:2327 [A] N:93 [ARG] A:2289 [C] ❌ 1YHQ_N_0
N:106 [LEU] 0:2328 [U] N:95 [GLY] A:2290 [G] ❌ 1YHQ_N_0
N:21 [HIS] 0:2370 [A] N:15 [THR] A:2332 [A] ❌ 7RYG_A:2332 no longer at interface
N:16 [ALA] 0:2329 [C] N:10 [ARG] A:2291 [C] ❌ 1YHQ_0:2329 no longer at interface
N:16 [ALA] 0:2330 [U] N:10 [ARG] A:2292 [U] ❌ 1YHQ_0:2330 no longer at interface
N:17 [ARG] 0:2329 [C] N:11 [ARG] A:2291 [C] ❌ 1YHQ_0:2329 no longer at interface
N:18 [THR] 0:2368 [A] N:12 [ALA] A:2330 [A] ❌ 7RYG_N:12 no longer at interface
N:22 [GLN] 0:2413 [A] N:16 [ARG] A:2372 [A] ❌ 7RYG_N:16 no longer at interface
N:22 [GLN] 0:2414 [A] N:16 [ARG] A:2373 [A] ❌ 7RYG_N:16 no longer at interface
N:22 [GLN] 0:2415 [A] N:16 [ARG] A:2374 [A] ❌ 7RYG_N:16 no longer at interface
N:108 [SER] 0:2328 [U] N:97 [LYS] A:2290 [G] ❌ 7RYG_N:97 no longer at interface
N:116 [PHE] 0:2413 [A] N:104 [ALA] A:2372 [A] ❌ 7RYG_N:104 no longer at interface
N:26 [LEU] 0:2414 [A] N:20 [ARG] A:2373 [A] ❌ 7RYG_N:20 no longer at interface
N:26 [LEU] 0:2415 [A] N:20 [ARG] A:2374 [A] ❌ 7RYG_N:20 no longer at interface
N:122 [ALA] 0:2414 [A] N:110 [ARG] A:2373 [A] ❌ 1YHQ_N:122 no longer at interface
N:122 [ALA] 0:2413 [A] N:110 [ARG] A:2372 [A] ❌ 1YHQ_N:122 no longer at interface
N:129 [ILE] 0:2414 [A] N:116 [PHE] A:2373 [A] ❌ 1YHQ_N:129 no longer at interface
N:129 [ILE] 0:2413 [A] N:116 [PHE] A:2372 [A] ❌ 1YHQ_N:129 no longer at interface
N:23 [ARG] 0:2368 [A] N:17 [LEU] A:2330 [A] ❌ 1YHQ_N:23 no longer at interface
N:24 [LEU] 0:2415 [A] N:18 [HIS] A:2374 [A] ❌ 1YHQ_N:24 no longer at interface
N:24 [LEU] 0:2416 [G] N:18 [HIS] A:2375 [G] ❌ 1YHQ_N:24 no longer at interface
N:24 [LEU] 0:2368 [A] N:18 [HIS] A:2330 [A] ❌ 1YHQ_N:24 no longer at interface
N:24 [LEU] 0:2417 [C] N:18 [HIS] A:2376 [U] ❌ 1YHQ_N:24 no longer at interface
N:30 [GLY] 0:2415 [A] N:22 [LEU] A:2374 [A] ❌ 1YHQ_N:30 no longer at interface
N:30 [GLY] 0:2416 [G] N:22 [LEU] A:2375 [G] ❌ 1YHQ_N:30 no longer at interface
N:30 [GLY] 0:2417 [C] N:22 [LEU] A:2376 [U] ❌ 1YHQ_N:30 no longer at interface
N:32 [PRO] 0:2415 [A] N:24 [ALA] A:2374 [A] ❌ 1YHQ_N:32 no longer at interface
N:100 [ALA] 0:2415 [A] N:89 [VAL] A:2374 [A] ❌ 1YHQ_N:100 no longer at interface
N:110 [THR] 0:2413 [A] N:98 [TYR] A:2372 [A] ❌ 1YHQ_N:110 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.92 5.16 0.05 0.83 0.92 0.58 0.83 0.17 0.13 0.00 0.55


Other pairs involving 1YHQ_N_0 or 7RYG_N_A

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1S_1A 7RYG_N_A 0.56 0.95 3.79 0.47 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
6AZ3_O_2 7RYG_N_A 0.22 0.74 3.63 0.0 Ribonuclease H-like compare
6S0Z_M_A 7RYG_N_A 0.66 0.98 2.44 0.37 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
1YHQ_N_0 6AZ3_O_2 0.80 0.79 1.52 0.42 Ribonuclease H-like compare
1YHQ_N_0 7RYG_N_A 0.17 0.92 5.16 0.05 Ribonuclease H-like compare
1YHQ_N_0 7O7Y_BD_B5 0.71 0.94 3.12 0.42 Ribonuclease H-like compare
1YHQ_N_0 6S0Z_M_A 0.30 0.91 3.99 0.14 Ribonuclease H-like compare
1YHQ_N_0 7K00_n_a 0.41 0.9 3.76 0.1 Ribonuclease H-like compare
1YHQ_N_0 4Y4O_1S_1A 0.37 0.91 4.27 0.09 Ribonuclease H-like compare
1VQ8_N_0 1YHQ_N_0 1.00 1.0 0.17 1.0 Ribonuclease H-like Archaeal large subunit ribosomal RNA compare
1VQ8_N_0 7RYG_N_A 0.17 0.92 5.13 0.05 Ribonuclease H-like compare