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All interfaces > All interologs > Interface groups > group122 > 4Y4O_1S_1A vs 6AZ3_O_2

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1A
6AZ3_O
6AZ3_2
Conserved?
1S:94 [TYR] 1A:2388 [A] O:159 [THR] 2:1175 [A] ✔
1S:93 [LYS] 1A:2306 [C] O:158 [ARG] 2:1091 [G] ✔
1S:3 [ARG] 1A:2331 [G] O:18 [VAL] 2:1116 [U] ✔
1S:18 [ILE] 1A:2389 [A] O:36 [MET] 2:1176 [A] ✔
1S:18 [ILE] 1A:2390 [A] O:36 [MET] 2:1177 [A] ✔
1S:23 [ARG] 1A:2390 [A] O:48 [LYS] 2:1177 [A] ✔
1S:23 [ARG] 1A:2391 [G] O:48 [LYS] 2:1178 [G] ✔
1S:91 [PRO] 1A:2306 [C] O:156 [LEU] 2:1091 [G] ✔
1S:13 [ARG] 1A:2347 [A] O:31 [HIS] 2:1132 [A] ✔
1S:12 [PHE] 1A:2346 [G] O:30 [TYR] 2:1131 [A] ✔
1S:9 [ARG] 1A:2346 [G] O:27 [LYS] 2:1131 [A] ✔
1S:87 [PHE] 1A:2388 [A] O:152 [LEU] 2:1175 [A] ✔
1S:87 [PHE] 1A:2389 [A] O:152 [LEU] 2:1176 [A] ✔
1S:86 [ALA] 1A:2390 [A] O:151 [ILE] 2:1177 [A] ✔
1S:21 [THR] 1A:2391 [G] O:39 [GLN] 2:1178 [G] ✔
1S:17 [ARG] 1A:2390 [A] O:35 [GLN] 2:1177 [A] ✔
1S:17 [ARG] 1A:2391 [G] O:35 [GLN] 2:1178 [G] ✔
1S:17 [ARG] 1A:2392 [C] O:35 [GLN] 2:1179 [C] ✔
1S:89 [ARG] 1A:2388 [A] O:154 [VAL] 2:1175 [A] ✔
1S:4 [LEU] 1A:2331 [G] O:19 [LYS] 2:1116 [U] ✔
1S:4 [LEU] 1A:2346 [G] O:19 [LYS] 2:1131 [A] ✔
1S:10 [ARG] 1A:2306 [C] O:28 [THR] 2:1091 [G] ❌ 6AZ3_O_2
1S:10 [ARG] 1A:2307 [C] O:28 [THR] 2:1092 [C] ❌ 6AZ3_O_2
1S:3 [ARG] 1A:2330 [G] O:18 [VAL] 2:1115 [G] ❌ 6AZ3_O_2
1S:3 [ARG] 1A:2332 [A] O:18 [VAL] 2:1117 [A] ❌ 6AZ3_O_2
1S:13 [ARG] 1A:2306 [C] O:31 [HIS] 2:1091 [G] ❌ 6AZ3_O_2
1S:13 [ARG] 1A:2307 [C] O:31 [HIS] 2:1092 [C] ❌ 6AZ3_O_2
1S:13 [ARG] 1A:2346 [G] O:31 [HIS] 2:1131 [A] ❌ 6AZ3_O_2
1S:9 [ARG] 1A:2345 [A] O:27 [LYS] 2:1130 [A] ❌ 6AZ3_O_2
1S:9 [ARG] 1A:2347 [A] O:27 [LYS] 2:1132 [A] ❌ 6AZ3_O_2
1S:21 [THR] 1A:2390 [A] O:39 [GLN] 2:1177 [A] ❌ 6AZ3_O_2
1S:89 [ARG] 1A:2305 [C] O:154 [VAL] 2:1090 [A] ❌ 6AZ3_O_2
1S:89 [ARG] 1A:2306 [C] O:154 [VAL] 2:1091 [G] ❌ 6AZ3_O_2
1S:14 [VAL] 1A:2306 [C] O:32 [ALA] 2:1091 [G] ❌ 6AZ3_O_2
1S:86 [ALA] 1A:2389 [A] O:151 [ILE] 2:1176 [A] ❌ 4Y4O_1S_1A
1S:91 [PRO] 1A:2346 [G] O:156 [LEU] 2:1131 [A] ❌ 4Y4O_1S_1A
1S:93 [LYS] 1A:2307 [C] O:158 [ARG] 2:1092 [C] ❌ 4Y4O_1S_1A
1S:93 [LYS] 1A:2305 [C] O:158 [ARG] 2:1090 [A] ❌ 4Y4O_1S_1A
1S:4 [LEU] 1A:2332 [A] O:19 [LYS] 2:1117 [A] ❌ 4Y4O_1S_1A
1S:4 [LEU] 1A:2345 [A] O:19 [LYS] 2:1130 [A] ❌ 4Y4O_1S_1A
1S:10 [ARG] 1A:2346 [G] O:28 [THR] 2:1131 [A] ❌ 4Y4O_1S_1A
1S:14 [VAL] 1A:2390 [A] O:32 [ALA] 2:1177 [A] ❌ 4Y4O_1S_1A
1S:3 [ARG] 1A:2308 [U] O:18 [VAL] 2:1093 [U] ❌ 6AZ3_2:1093 no longer at interface
1S:3 [ARG] 1A:2309 [C] O:18 [VAL] 2:1094 [C] ❌ 6AZ3_2:1094 no longer at interface
1S:9 [ARG] 1A:2308 [U] O:27 [LYS] 2:1093 [U] ❌ 6AZ3_2:1093 no longer at interface
1S:17 [ARG] 1A:2303 [U] O:35 [GLN] 2:1088 [C] ❌ 6AZ3_2:1088 no longer at interface
1S:17 [ARG] 1A:2304 [C] O:35 [GLN] 2:1089 [G] ❌ 6AZ3_2:1089 no longer at interface
1S:13 [ARG] 1A:2348 [A] O:31 [HIS] 2:1133 [A] ❌ 4Y4O_1A:2348 no longer at interface
1S:106 [ARG] 1A:2388 [A] O:173 [VAL] 2:1175 [A] ❌ 6AZ3_O:173 no longer at interface
1S:106 [ARG] 1A:2389 [A] O:173 [VAL] 2:1176 [A] ❌ 6AZ3_O:173 no longer at interface
1S:85 [VAL] 1A:2390 [A] O:150 [ALA] 2:1177 [A] ❌ 6AZ3_O:150 no longer at interface
1S:92 [TYR] 1A:2306 [C] O:157 [ALA] 2:1091 [G] ❌ 6AZ3_O:157 no longer at interface
1S:16 [ASN] 1A:2346 [G] O:34 [ARG] 2:1131 [A] ❌ 6AZ3_O:34 no longer at interface
1S:112 [PHE] 1A:2388 [A] O:179 [VAL] 2:1175 [A] ❌ 6AZ3_O:179 no longer at interface
1S:112 [PHE] 1A:2389 [A] O:179 [VAL] 2:1176 [A] ❌ 6AZ3_O:179 no longer at interface
1S:112 [PHE] 1A:2390 [A] O:179 [VAL] 2:1177 [A] ❌ 6AZ3_O:179 no longer at interface
1S:84 [GLN] 1A:2390 [A] O:149 [LYS] 2:1177 [A] ❌ 4Y4O_1S:84 no longer at interface
1S:99 [LYS] 1A:2388 [A] O:166 [PHE] 2:1175 [A] ❌ 4Y4O_1S:99 no longer at interface
1S:102 [ALA] 1A:2388 [A] O:169 [LEU] 2:1175 [A] ❌ 4Y4O_1S:102 no longer at interface
1S:5 [THR] 1A:2345 [A] O:23 [ARG] 2:1130 [A] ❌ 4Y4O_1S:5 no longer at interface
1S:5 [THR] 1A:2346 [G] O:23 [ARG] 2:1131 [A] ❌ 4Y4O_1S:5 no longer at interface
1S:8 [GLU] 1A:2346 [G] O:26 [GLY] 2:1131 [A] ❌ 4Y4O_1S:8 no longer at interface
1S:11 [LYS] 1A:2346 [G] O:29 [ASP] 2:1131 [A] ❌ 4Y4O_1S:11 no longer at interface
1S:11 [LYS] 1A:2347 [A] O:29 [ASP] 2:1132 [A] ❌ 4Y4O_1S:11 no longer at interface
1S:19 [LYS] 1A:2390 [A] O:37 [VAL] 2:1177 [A] ❌ 4Y4O_1S:19 no longer at interface
1S:20 [ARG] 1A:2392 [C] O:38 [LEU] 2:1179 [C] ❌ 4Y4O_1S:20 no longer at interface
1S:20 [ARG] 1A:2391 [G] O:38 [LEU] 2:1178 [G] ❌ 4Y4O_1S:20 no longer at interface
1S:20 [ARG] 1A:2390 [A] O:38 [LEU] 2:1177 [A] ❌ 4Y4O_1S:20 no longer at interface
1S:22 [GLY] 1A:2391 [G] O:40 [ASP] 2:1178 [G] ❌ 4Y4O_1S:22 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.75 4.24 0.00 0.83 0.83 0.74 0.78 0.40 0.28 0.05 0.56


Other pairs involving 4Y4O_1S_1A or 6AZ3_O_2

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1S_1A 7K00_n_a 0.77 0.96 1.65 0.43 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 6S0Z_M_A 0.62 0.97 2.94 0.38 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 6AZ3_O_2 0.40 0.75 4.24 0.0 Ribonuclease H-like compare
4Y4O_1S_1A 7RYG_N_A 0.56 0.95 3.79 0.47 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 7O7Y_BD_B5 0.36 0.89 4.42 0.04 Ribonuclease H-like compare
6AZ3_O_2 7RYG_N_A 0.22 0.74 3.63 0.0 Ribonuclease H-like compare
6AZ3_O_2 7O7Y_BD_B5 0.93 0.92 0.85 0.68 Ribonuclease H-like Eukaryotic large subunit ribosomal RNA compare
6AZ3_O_2 7K00_n_a 0.46 0.75 2.27 0.05 Ribonuclease H-like compare
6AZ3_O_2 6S0Z_M_A 0.37 0.75 3.35 0.05 Ribonuclease H-like compare
1YHQ_N_0 6AZ3_O_2 0.80 0.79 1.52 0.42 Ribonuclease H-like compare
1YHQ_N_0 4Y4O_1S_1A 0.37 0.91 4.27 0.09 Ribonuclease H-like compare
1VQ8_N_0 6AZ3_O_2 0.80 0.79 1.53 0.42 Ribonuclease H-like compare
1VQ8_N_0 4Y4O_1S_1A 0.37 0.91 4.22 0.09 Ribonuclease H-like compare