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All interfaces > All interologs > Interface groups > group123 > 4Y4O_1S_1B vs 6AZ3_O_8

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1B
6AZ3_O
6AZ3_8
Conserved?
1S:93 [LYS] 1B:47 [C] O:158 [ARG] 8:46 [U] ✔
1S:93 [LYS] 1B:48 [A] O:158 [ARG] 8:47 [U] ✔
1S:52 [SER] 1B:116 [G] O:79 [TYR] 8:118 [C] ✔
1S:31 [SER] 1B:28 [C] O:56 [THR] 8:28 [C] ✔
1S:31 [SER] 1B:29 [A] O:56 [THR] 8:29 [A] ✔
1S:45 [GLY] 1B:9 [G] O:71 [GLY] 8:9 [G] ✔
1S:45 [GLY] 1B:113 [G] O:71 [GLY] 8:115 [G] ✔
1S:47 [THR] 1B:7 [G] O:74 [VAL] 8:7 [A] ✔
1S:47 [THR] 1B:114 [C] O:74 [VAL] 8:116 [U] ✔
1S:47 [THR] 1B:115 [G] O:74 [VAL] 8:117 [A] ✔
1S:61 [ASN] 1B:51 [G] O:91 [GLY] 8:50 [G] ✔
1S:27 [SER] 1B:7 [G] O:52 [VAL] 8:7 [A] ✔
1S:27 [SER] 1B:8 [U] O:52 [VAL] 8:8 [C] ✔
1S:92 [TYR] 1B:48 [A] O:157 [ALA] 8:47 [U] ✔
1S:96 [GLY] 1B:48 [A] O:163 [ALA] 8:47 [U] ✔
1S:96 [GLY] 1B:49 [C] O:163 [ALA] 8:48 [G] ✔
1S:97 [ARG] 1B:48 [A] O:164 [ARG] 8:47 [U] ✔
1S:97 [ARG] 1B:49 [C] O:164 [ARG] 8:48 [G] ✔
1S:97 [ARG] 1B:50 [G] O:164 [ARG] 8:49 [U] ✔
1S:34 [HIS] 1B:27 [C] O:59 [ASP] 8:27 [A] ✔
1S:34 [HIS] 1B:28 [C] O:59 [ASP] 8:28 [C] ✔
1S:29 [PHE] 1B:7 [G] O:54 [ARG] 8:7 [A] ✔
1S:36 [TYR] 1B:6 [C] O:61 [ILE] 8:6 [U] ✔
1S:50 [SER] 1B:115 [G] O:77 [ALA] 8:117 [A] ✔
1S:50 [SER] 1B:116 [G] O:77 [ALA] 8:118 [C] ✔
1S:40 [ILE] 1B:8 [U] O:65 [VAL] 8:8 [C] ✔
1S:38 [GLN] 1B:7 [G] O:63 [GLN] 8:7 [A] ✔
1S:38 [GLN] 1B:8 [U] O:63 [GLN] 8:8 [C] ✔
1S:38 [GLN] 1B:115 [G] O:63 [GLN] 8:117 [A] ✔
1S:32 [LEU] 1B:29 [A] O:57 [ASN] 8:29 [A] ✔
1S:32 [LEU] 1B:30 [C] O:57 [ASN] 8:30 [C] ✔
1S:32 [LEU] 1B:31 [C] O:57 [ASN] 8:31 [C] ✔
1S:32 [LEU] 1B:51 [G] O:57 [ASN] 8:50 [G] ✔
1S:32 [LEU] 1B:52 [A] O:57 [ASN] 8:51 [A] ✔
1S:62 [LYS] 1B:50 [G] O:94 [ASN] 8:49 [U] ✔
1S:62 [LYS] 1B:51 [G] O:94 [ASN] 8:50 [G] ✔
1S:25 [ARG] 1B:8 [U] O:50 [ARG] 8:8 [C] ✔
1S:25 [ARG] 1B:9 [G] O:50 [ARG] 8:9 [G] ✔
1S:33 [LYS] 1B:28 [C] O:58 [LYS] 8:28 [C] ✔
1S:33 [LYS] 1B:29 [A] O:58 [LYS] 8:29 [A] ✔
1S:33 [LYS] 1B:52 [A] O:58 [LYS] 8:51 [A] ✔
1S:15 [ARG] 1B:8 [U] O:33 [ARG] 8:8 [C] ✔
1S:15 [ARG] 1B:9 [G] O:33 [ARG] 8:9 [G] ✔
1S:95 [HIS] 1B:37 [C] O:162 [GLY] 8:37 [C] ✔
1S:95 [HIS] 1B:48 [A] O:162 [GLY] 8:47 [U] ✔
1S:95 [HIS] 1B:49 [C] O:162 [GLY] 8:48 [G] ✔
1S:63 [THR] 1B:49 [C] O:95 [TYR] 8:48 [G] ✔
1S:63 [THR] 1B:50 [G] O:95 [TYR] 8:49 [U] ✔
1S:46 [VAL] 1B:114 [C] O:73 [GLU] 8:116 [U] ✔
1S:98 [VAL] 1B:49 [C] O:165 [VAL] 8:48 [G] ✔
1S:93 [LYS] 1B:38 [C] O:158 [ARG] 8:38 [C] ❌ 6AZ3_O_8
1S:93 [LYS] 1B:39 [A] O:158 [ARG] 8:39 [G] ❌ 6AZ3_O_8
1S:7 [TYR] 1B:47 [C] O:25 [GLU] 8:46 [U] ❌ 6AZ3_O_8
1S:31 [SER] 1B:27 [C] O:56 [THR] 8:27 [A] ❌ 6AZ3_O_8
1S:45 [GLY] 1B:114 [C] O:71 [GLY] 8:116 [U] ❌ 6AZ3_O_8
1S:61 [ASN] 1B:50 [G] O:91 [GLY] 8:49 [U] ❌ 6AZ3_O_8
1S:10 [ARG] 1B:46 [A] O:28 [THR] 8:45 [U] ❌ 6AZ3_O_8
1S:10 [ARG] 1B:47 [C] O:28 [THR] 8:46 [U] ❌ 6AZ3_O_8
1S:92 [TYR] 1B:47 [C] O:157 [ALA] 8:46 [U] ❌ 6AZ3_O_8
1S:29 [PHE] 1B:6 [C] O:54 [ARG] 8:6 [U] ❌ 6AZ3_O_8
1S:29 [PHE] 1B:28 [C] O:54 [ARG] 8:28 [C] ❌ 6AZ3_O_8
1S:29 [PHE] 1B:29 [A] O:54 [ARG] 8:29 [A] ❌ 6AZ3_O_8
1S:36 [TYR] 1B:27 [C] O:61 [ILE] 8:27 [A] ❌ 6AZ3_O_8
1S:36 [TYR] 1B:28 [C] O:61 [ILE] 8:28 [C] ❌ 6AZ3_O_8
1S:36 [TYR] 1B:116 [G] O:61 [ILE] 8:118 [C] ❌ 6AZ3_O_8
1S:38 [GLN] 1B:114 [C] O:63 [GLN] 8:116 [U] ❌ 6AZ3_O_8
1S:32 [LEU] 1B:28 [C] O:57 [ASN] 8:28 [C] ❌ 6AZ3_O_8
1S:62 [LYS] 1B:52 [A] O:94 [ASN] 8:51 [A] ❌ 6AZ3_O_8
1S:33 [LYS] 1B:27 [C] O:58 [LYS] 8:27 [A] ❌ 6AZ3_O_8
1S:15 [ARG] 1B:7 [G] O:33 [ARG] 8:7 [A] ❌ 6AZ3_O_8
1S:95 [HIS] 1B:38 [C] O:162 [GLY] 8:38 [C] ❌ 6AZ3_O_8
1S:54 [LEU] 1B:27 [C] O:81 [HIS] 8:27 [A] ❌ 6AZ3_O_8
1S:54 [LEU] 1B:117 [G] O:81 [HIS] 8:119 [U] ❌ 6AZ3_O_8
1S:46 [VAL] 1B:113 [G] O:73 [GLU] 8:115 [G] ❌ 6AZ3_O_8
1S:93 [LYS] 1B:46 [A] O:158 [ARG] 8:45 [U] ❌ 4Y4O_1S_1B
1S:10 [ARG] 1B:9 [G] O:28 [THR] 8:9 [G] ❌ 4Y4O_1S_1B
1S:29 [PHE] 1B:8 [U] O:54 [ARG] 8:8 [C] ❌ 4Y4O_1S_1B
1S:29 [PHE] 1B:9 [G] O:54 [ARG] 8:9 [G] ❌ 4Y4O_1S_1B
1S:31 [SER] 1B:7 [G] O:56 [THR] 8:7 [A] ❌ 4Y4O_1S_1B
1S:36 [TYR] 1B:7 [G] O:61 [ILE] 8:7 [A] ❌ 4Y4O_1S_1B
1S:47 [THR] 1B:8 [U] O:74 [VAL] 8:8 [C] ❌ 4Y4O_1S_1B
1S:52 [SER] 1B:6 [C] O:79 [TYR] 8:6 [U] ❌ 4Y4O_1S_1B
1S:52 [SER] 1B:115 [G] O:79 [TYR] 8:117 [A] ❌ 4Y4O_1S_1B
1S:54 [LEU] 1B:116 [G] O:81 [HIS] 8:118 [C] ❌ 4Y4O_1S_1B
1S:54 [LEU] 1B:26 [A] O:81 [HIS] 8:26 [A] ❌ 6AZ3_8:26 no longer at interface
1S:3 [ARG] 1B:15 [A] O:18 [VAL] 8:15 [A] ❌ 4Y4O_1S:3, 4Y4O_1B:15 no longer at interface
1S:3 [ARG] 1B:13 [A] O:18 [VAL] 8:13 [A] ❌ 4Y4O_1S:3, 4Y4O_1B:13 no longer at interface
1S:3 [ARG] 1B:16 [G] O:18 [VAL] 8:16 [C] ❌ 4Y4O_1S:3, 4Y4O_1B:16 no longer at interface
1S:3 [ARG] 1B:12 [C] O:18 [VAL] 8:12 [C] ❌ 4Y4O_1S:3, 4Y4O_1B:12 no longer at interface
1S:4 [LEU] 1B:12 [C] O:19 [LYS] 8:12 [C] ❌ 4Y4O_1S:4, 4Y4O_1B:12 no longer at interface
1S:7 [TYR] 1B:61 [G] O:25 [GLU] 8:60 [A] ❌ 4Y4O_1B:61 no longer at interface
1S:12 [PHE] 1B:10 [C] O:30 [TYR] 8:10 [A] ❌ 4Y4O_1S:12, 4Y4O_1B:10 no longer at interface
1S:12 [PHE] 1B:12 [C] O:30 [TYR] 8:12 [C] ❌ 4Y4O_1S:12, 4Y4O_1B:12 no longer at interface
1S:15 [ARG] 1B:10 [C] O:33 [ARG] 8:10 [A] ❌ 4Y4O_1B:10 no longer at interface
1S:43 [GLU] 1B:10 [C] O:68 [LYS] 8:10 [A] ❌ 4Y4O_1S:43, 4Y4O_1B:10 no longer at interface
1S:44 [LYS] 1B:10 [C] O:69 [ILE] 8:10 [A] ❌ 4Y4O_1S:44, 4Y4O_1B:10 no longer at interface
1S:45 [GLY] 1B:10 [C] O:71 [GLY] 8:10 [A] ❌ 4Y4O_1B:10 no longer at interface
1S:91 [PRO] 1B:47 [C] O:156 [LEU] 8:46 [U] ❌ 6AZ3_O:156 no longer at interface
1S:91 [PRO] 1B:48 [A] O:156 [LEU] 8:47 [U] ❌ 6AZ3_O:156 no longer at interface
1S:55 [ALA] 1B:116 [G] O:82 [GLU] 8:118 [C] ❌ 6AZ3_O:82 no longer at interface
1S:55 [ALA] 1B:117 [G] O:82 [GLU] 8:119 [U] ❌ 6AZ3_O:82 no longer at interface
1S:11 [LYS] 1B:7 [G] O:29 [ASP] 8:7 [A] ❌ 6AZ3_O:29 no longer at interface
1S:11 [LYS] 1B:8 [U] O:29 [ASP] 8:8 [C] ❌ 6AZ3_O:29 no longer at interface
1S:19 [LYS] 1B:8 [U] O:37 [VAL] 8:8 [C] ❌ 6AZ3_O:37 no longer at interface
1S:19 [LYS] 1B:9 [G] O:37 [VAL] 8:9 [G] ❌ 6AZ3_O:37 no longer at interface
1S:42 [ASP] 1B:8 [U] O:67 [ALA] 8:8 [C] ❌ 6AZ3_O:67 no longer at interface
1S:42 [ASP] 1B:9 [G] O:67 [ALA] 8:9 [G] ❌ 6AZ3_O:67 no longer at interface
1S:60 [GLY] 1B:51 [G] O:90 [HIS] 8:50 [G] ❌ 6AZ3_O:90 no longer at interface
1S:30 [ARG] 1B:29 [A] O:55 [ILE] 8:29 [A] ❌ 6AZ3_O:55 no longer at interface
1S:30 [ARG] 1B:48 [A] O:55 [ILE] 8:47 [U] ❌ 6AZ3_O:55 no longer at interface
1S:30 [ARG] 1B:49 [C] O:55 [ILE] 8:48 [G] ❌ 6AZ3_O:55 no longer at interface
1S:9 [ARG] 1B:7 [G] O:27 [LYS] 8:7 [A] ❌ 4Y4O_1S:9 no longer at interface
1S:9 [ARG] 1B:8 [U] O:27 [LYS] 8:8 [C] ❌ 4Y4O_1S:9 no longer at interface
1S:9 [ARG] 1B:9 [G] O:27 [LYS] 8:9 [G] ❌ 4Y4O_1S:9 no longer at interface
1S:12 [PHE] 1B:9 [G] O:30 [TYR] 8:9 [G] ❌ 4Y4O_1S:12 no longer at interface
1S:43 [GLU] 1B:9 [G] O:68 [LYS] 8:9 [G] ❌ 4Y4O_1S:43 no longer at interface
1S:49 [VAL] 1B:115 [G] O:76 [MET] 8:117 [A] ❌ 4Y4O_1S:49 no longer at interface
1S:64 [GLU] 1B:50 [G] O:96 [ALA] 8:49 [U] ❌ 4Y4O_1S:64 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 5S ribosomal RNA 0.83 2.82 0.20 0.83 0.75 0.8 0.96 0.59 0.37 0.26 0.50


Other pairs involving 4Y4O_1S_1B or 6AZ3_O_8

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_N_9 4Y4O_1S_1B 0.65 0.87 2.31 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 4Y4O_1S_1B 0.63 0.87 2.3 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 6AZ3_O_8 0.87 0.9 1.8 0.44 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 6AZ3_O_8 0.83 0.9 1.77 0.43 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6AZ3_O_8 0.59 0.83 2.82 0.2 Ribonuclease H-like 5S ribosomal RNA compare
6AZ3_O_8 6S0Z_M_B 0.65 0.84 2.28 0.22 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6S0Z_M_B 0.82 0.89 1.29 0.51 Ribonuclease H-like 5S ribosomal RNA compare
6AZ3_O_8 7O7Y_BD_B7 0.92 0.96 0.98 0.67 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O7Y_BD_B7 0.57 0.83 2.76 0.14 Ribonuclease H-like 5S ribosomal RNA compare
6AZ3_O_8 7O9M_P_B 0.73 0.55 2.06 0.1 Ribonuclease H-like compare
4Y4O_1S_1B 7O9M_P_B 0.72 0.53 2.72 0.1 Ribonuclease H-like compare
6AZ3_O_8 7OF0_P_B 0.76 0.56 1.99 0.11 Ribonuclease H-like compare
4Y4O_1S_1B 7OF0_P_B 0.72 0.54 2.33 0.11 Ribonuclease H-like compare
6AZ3_O_8 7RYG_N_B 0.66 0.84 2.31 0.21 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7RYG_N_B 0.86 0.91 1.56 0.43 Ribonuclease H-like 5S ribosomal RNA compare