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All interfaces > All interologs > Interface groups > group123 > 4Y4O_1S_1B vs 7O7Y_BD_B7

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1B
7O7Y_BD
7O7Y_B7
Conserved?
1S:93 [LYS] 1B:47 [C] BD:152 [ARG] B7:44 [C] ✔
1S:93 [LYS] 1B:48 [A] BD:152 [ARG] B7:45 [U] ✔
1S:52 [SER] 1B:116 [G] BD:79 [TYR] B7:116 [G] ✔
1S:31 [SER] 1B:28 [C] BD:56 [THR] B7:26 [C] ✔
1S:31 [SER] 1B:29 [A] BD:56 [THR] B7:27 [G] ✔
1S:45 [GLY] 1B:9 [G] BD:71 [GLY] B7:7 [G] ✔
1S:45 [GLY] 1B:113 [G] BD:71 [GLY] B7:113 [G] ✔
1S:47 [THR] 1B:7 [G] BD:74 [ILE] B7:5 [A] ✔
1S:47 [THR] 1B:114 [C] BD:74 [ILE] B7:114 [U] ✔
1S:47 [THR] 1B:115 [G] BD:74 [ILE] B7:115 [A] ✔
1S:61 [ASN] 1B:51 [G] BD:91 [GLY] B7:48 [G] ✔
1S:27 [SER] 1B:7 [G] BD:52 [ILE] B7:5 [A] ✔
1S:27 [SER] 1B:8 [U] BD:52 [ILE] B7:6 [C] ✔
1S:91 [PRO] 1B:48 [A] BD:150 [LEU] B7:45 [U] ✔
1S:92 [TYR] 1B:48 [A] BD:151 [ALA] B7:45 [U] ✔
1S:96 [GLY] 1B:48 [A] BD:157 [ASN] B7:45 [U] ✔
1S:96 [GLY] 1B:49 [C] BD:157 [ASN] B7:46 [C] ✔
1S:97 [ARG] 1B:48 [A] BD:158 [LYS] B7:45 [U] ✔
1S:97 [ARG] 1B:49 [C] BD:158 [LYS] B7:46 [C] ✔
1S:97 [ARG] 1B:50 [G] BD:158 [LYS] B7:47 [G] ✔
1S:34 [HIS] 1B:28 [C] BD:59 [ASP] B7:26 [C] ✔
1S:29 [PHE] 1B:7 [G] BD:54 [ARG] B7:5 [A] ✔
1S:36 [TYR] 1B:6 [C] BD:61 [ILE] B7:4 [U] ✔
1S:50 [SER] 1B:115 [G] BD:77 [ALA] B7:115 [A] ✔
1S:40 [ILE] 1B:8 [U] BD:65 [ALA] B7:6 [C] ✔
1S:38 [GLN] 1B:7 [G] BD:63 [GLN] B7:5 [A] ✔
1S:38 [GLN] 1B:8 [U] BD:63 [GLN] B7:6 [C] ✔
1S:38 [GLN] 1B:115 [G] BD:63 [GLN] B7:115 [A] ✔
1S:32 [LEU] 1B:29 [A] BD:57 [ASN] B7:27 [G] ✔
1S:32 [LEU] 1B:30 [C] BD:57 [ASN] B7:28 [C] ✔
1S:32 [LEU] 1B:31 [C] BD:57 [ASN] B7:29 [C] ✔
1S:32 [LEU] 1B:51 [G] BD:57 [ASN] B7:48 [G] ✔
1S:32 [LEU] 1B:52 [A] BD:57 [ASN] B7:49 [A] ✔
1S:30 [ARG] 1B:29 [A] BD:55 [VAL] B7:27 [G] ✔
1S:62 [LYS] 1B:50 [G] BD:94 [ASN] B7:47 [G] ✔
1S:62 [LYS] 1B:51 [G] BD:94 [ASN] B7:48 [G] ✔
1S:25 [ARG] 1B:8 [U] BD:50 [ARG] B7:6 [C] ✔
1S:25 [ARG] 1B:9 [G] BD:50 [ARG] B7:7 [G] ✔
1S:33 [LYS] 1B:28 [C] BD:58 [ARG] B7:26 [C] ✔
1S:33 [LYS] 1B:29 [A] BD:58 [ARG] B7:27 [G] ✔
1S:33 [LYS] 1B:52 [A] BD:58 [ARG] B7:49 [A] ✔
1S:15 [ARG] 1B:8 [U] BD:33 [ARG] B7:6 [C] ✔
1S:15 [ARG] 1B:9 [G] BD:33 [ARG] B7:7 [G] ✔
1S:95 [HIS] 1B:37 [C] BD:156 [GLY] B7:35 [U] ✔
1S:95 [HIS] 1B:48 [A] BD:156 [GLY] B7:45 [U] ✔
1S:95 [HIS] 1B:49 [C] BD:156 [GLY] B7:46 [C] ✔
1S:63 [THR] 1B:49 [C] BD:95 [TYR] B7:46 [C] ✔
1S:63 [THR] 1B:50 [G] BD:95 [TYR] B7:47 [G] ✔
1S:46 [VAL] 1B:113 [G] BD:73 [MET] B7:113 [G] ✔
1S:46 [VAL] 1B:114 [C] BD:73 [MET] B7:114 [U] ✔
1S:98 [VAL] 1B:49 [C] BD:159 [VAL] B7:46 [C] ✔
1S:93 [LYS] 1B:38 [C] BD:152 [ARG] B7:36 [C] ❌ 7O7Y_BD_B7
1S:93 [LYS] 1B:39 [A] BD:152 [ARG] B7:37 [G] ❌ 7O7Y_BD_B7
1S:7 [TYR] 1B:47 [C] BD:25 [GLU] B7:44 [C] ❌ 7O7Y_BD_B7
1S:45 [GLY] 1B:114 [C] BD:71 [GLY] B7:114 [U] ❌ 7O7Y_BD_B7
1S:61 [ASN] 1B:50 [G] BD:91 [GLY] B7:47 [G] ❌ 7O7Y_BD_B7
1S:10 [ARG] 1B:47 [C] BD:28 [THR] B7:44 [C] ❌ 7O7Y_BD_B7
1S:91 [PRO] 1B:47 [C] BD:150 [LEU] B7:44 [C] ❌ 7O7Y_BD_B7
1S:92 [TYR] 1B:47 [C] BD:151 [ALA] B7:44 [C] ❌ 7O7Y_BD_B7
1S:29 [PHE] 1B:6 [C] BD:54 [ARG] B7:4 [U] ❌ 7O7Y_BD_B7
1S:29 [PHE] 1B:28 [C] BD:54 [ARG] B7:26 [C] ❌ 7O7Y_BD_B7
1S:29 [PHE] 1B:29 [A] BD:54 [ARG] B7:27 [G] ❌ 7O7Y_BD_B7
1S:36 [TYR] 1B:28 [C] BD:61 [ILE] B7:26 [C] ❌ 7O7Y_BD_B7
1S:36 [TYR] 1B:116 [G] BD:61 [ILE] B7:116 [G] ❌ 7O7Y_BD_B7
1S:50 [SER] 1B:116 [G] BD:77 [ALA] B7:116 [G] ❌ 7O7Y_BD_B7
1S:38 [GLN] 1B:114 [C] BD:63 [GLN] B7:114 [U] ❌ 7O7Y_BD_B7
1S:32 [LEU] 1B:28 [C] BD:57 [ASN] B7:26 [C] ❌ 7O7Y_BD_B7
1S:30 [ARG] 1B:48 [A] BD:55 [VAL] B7:45 [U] ❌ 7O7Y_BD_B7
1S:30 [ARG] 1B:49 [C] BD:55 [VAL] B7:46 [C] ❌ 7O7Y_BD_B7
1S:62 [LYS] 1B:52 [A] BD:94 [ASN] B7:49 [A] ❌ 7O7Y_BD_B7
1S:15 [ARG] 1B:7 [G] BD:33 [ARG] B7:5 [A] ❌ 7O7Y_BD_B7
1S:95 [HIS] 1B:38 [C] BD:156 [GLY] B7:36 [C] ❌ 7O7Y_BD_B7
1S:54 [LEU] 1B:117 [G] BD:81 [HIS] B7:117 [G] ❌ 7O7Y_BD_B7
1S:10 [ARG] 1B:9 [G] BD:28 [THR] B7:7 [G] ❌ 4Y4O_1S_1B
1S:29 [PHE] 1B:9 [G] BD:54 [ARG] B7:7 [G] ❌ 4Y4O_1S_1B
1S:29 [PHE] 1B:8 [U] BD:54 [ARG] B7:6 [C] ❌ 4Y4O_1S_1B
1S:31 [SER] 1B:7 [G] BD:56 [THR] B7:5 [A] ❌ 4Y4O_1S_1B
1S:33 [LYS] 1B:30 [C] BD:58 [ARG] B7:28 [C] ❌ 4Y4O_1S_1B
1S:36 [TYR] 1B:7 [G] BD:61 [ILE] B7:5 [A] ❌ 4Y4O_1S_1B
1S:47 [THR] 1B:8 [U] BD:74 [ILE] B7:6 [C] ❌ 4Y4O_1S_1B
1S:52 [SER] 1B:115 [G] BD:79 [TYR] B7:115 [A] ❌ 4Y4O_1S_1B
1S:52 [SER] 1B:6 [C] BD:79 [TYR] B7:4 [U] ❌ 4Y4O_1S_1B
1S:54 [LEU] 1B:116 [G] BD:81 [HIS] B7:116 [G] ❌ 4Y4O_1S_1B
1S:61 [ASN] 1B:52 [A] BD:91 [GLY] B7:49 [A] ❌ 4Y4O_1S_1B
1S:31 [SER] 1B:27 [C] BD:56 [THR] B7:25 [G] ❌ 7O7Y_B7:25 no longer at interface
1S:10 [ARG] 1B:46 [A] BD:28 [THR] B7:43 [U] ❌ 7O7Y_B7:43 no longer at interface
1S:34 [HIS] 1B:27 [C] BD:59 [ASP] B7:25 [G] ❌ 7O7Y_B7:25 no longer at interface
1S:36 [TYR] 1B:27 [C] BD:61 [ILE] B7:25 [G] ❌ 7O7Y_B7:25 no longer at interface
1S:33 [LYS] 1B:27 [C] BD:58 [ARG] B7:25 [G] ❌ 7O7Y_B7:25 no longer at interface
1S:54 [LEU] 1B:26 [A] BD:81 [HIS] B7:24 [C] ❌ 7O7Y_B7:24 no longer at interface
1S:54 [LEU] 1B:27 [C] BD:81 [HIS] B7:25 [G] ❌ 7O7Y_B7:25 no longer at interface
1S:3 [ARG] 1B:13 [A] BD:18 [VAL] B7:11 [A] ❌ 4Y4O_1S:3, 4Y4O_1B:13 no longer at interface
1S:3 [ARG] 1B:16 [G] BD:18 [VAL] B7:14 [C] ❌ 4Y4O_1S:3, 4Y4O_1B:16 no longer at interface
1S:3 [ARG] 1B:12 [C] BD:18 [VAL] B7:10 [C] ❌ 4Y4O_1S:3, 4Y4O_1B:12 no longer at interface
1S:4 [LEU] 1B:12 [C] BD:19 [LYS] B7:10 [C] ❌ 4Y4O_1S:4, 4Y4O_1B:12 no longer at interface
1S:7 [TYR] 1B:61 [G] BD:25 [GLU] B7:58 [A] ❌ 4Y4O_1B:61 no longer at interface
1S:12 [PHE] 1B:10 [C] BD:30 [TYR] B7:8 [G] ❌ 4Y4O_1S:12, 4Y4O_1B:10 no longer at interface
1S:12 [PHE] 1B:12 [C] BD:30 [TYR] B7:10 [C] ❌ 4Y4O_1S:12, 4Y4O_1B:12 no longer at interface
1S:15 [ARG] 1B:10 [C] BD:33 [ARG] B7:8 [G] ❌ 4Y4O_1B:10 no longer at interface
1S:33 [LYS] 1B:54 [G] BD:58 [ARG] B7:51 [G] ❌ 4Y4O_1B:54 no longer at interface
1S:33 [LYS] 1B:55 [U] BD:58 [ARG] B7:52 [C] ❌ 4Y4O_1B:55 no longer at interface
1S:43 [GLU] 1B:10 [C] BD:68 [ARG] B7:8 [G] ❌ 4Y4O_1S:43, 4Y4O_1B:10 no longer at interface
1S:44 [LYS] 1B:10 [C] BD:70 [GLU] B7:8 [G] ❌ 4Y4O_1S:44, 4Y4O_1B:10 no longer at interface
1S:45 [GLY] 1B:10 [C] BD:71 [GLY] B7:8 [G] ❌ 4Y4O_1B:10 no longer at interface
1S:55 [ALA] 1B:116 [G] BD:82 [GLU] B7:116 [G] ❌ 7O7Y_BD:82 no longer at interface
1S:55 [ALA] 1B:117 [G] BD:82 [GLU] B7:117 [G] ❌ 7O7Y_BD:82 no longer at interface
1S:11 [LYS] 1B:7 [G] BD:29 [ASP] B7:5 [A] ❌ 7O7Y_BD:29 no longer at interface
1S:11 [LYS] 1B:8 [U] BD:29 [ASP] B7:6 [C] ❌ 7O7Y_BD:29 no longer at interface
1S:19 [LYS] 1B:8 [U] BD:37 [VAL] B7:6 [C] ❌ 7O7Y_BD:37 no longer at interface
1S:19 [LYS] 1B:9 [G] BD:37 [VAL] B7:7 [G] ❌ 7O7Y_BD:37 no longer at interface
1S:42 [ASP] 1B:8 [U] BD:67 [ALA] B7:6 [C] ❌ 7O7Y_BD:67 no longer at interface
1S:42 [ASP] 1B:9 [G] BD:67 [ALA] B7:7 [G] ❌ 7O7Y_BD:67 no longer at interface
1S:60 [GLY] 1B:51 [G] BD:90 [VAL] B7:48 [G] ❌ 7O7Y_BD:90 no longer at interface
1S:88 [ASP] 1B:9 [G] BD:147 [ASP] B7:7 [G] ❌ 4Y4O_1S:88 no longer at interface
1S:88 [ASP] 1B:8 [U] BD:147 [ASP] B7:6 [C] ❌ 4Y4O_1S:88 no longer at interface
1S:9 [ARG] 1B:9 [G] BD:27 [LYS] B7:7 [G] ❌ 4Y4O_1S:9 no longer at interface
1S:9 [ARG] 1B:7 [G] BD:27 [LYS] B7:5 [A] ❌ 4Y4O_1S:9 no longer at interface
1S:9 [ARG] 1B:6 [C] BD:27 [LYS] B7:4 [U] ❌ 4Y4O_1S:9 no longer at interface
1S:9 [ARG] 1B:8 [U] BD:27 [LYS] B7:6 [C] ❌ 4Y4O_1S:9 no longer at interface
1S:12 [PHE] 1B:9 [G] BD:30 [TYR] B7:7 [G] ❌ 4Y4O_1S:12 no longer at interface
1S:43 [GLU] 1B:9 [G] BD:68 [ARG] B7:7 [G] ❌ 4Y4O_1S:43 no longer at interface
1S:44 [LYS] 1B:9 [G] BD:70 [GLU] B7:7 [G] ❌ 4Y4O_1S:44 no longer at interface
1S:44 [LYS] 1B:113 [G] BD:70 [GLU] B7:113 [G] ❌ 4Y4O_1S:44 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 5S ribosomal RNA 0.83 2.76 0.14 0.82 0.76 0.86 0.88 0.57 0.38 0.24 0.54


Other pairs involving 4Y4O_1S_1B or 7O7Y_BD_B7

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_N_9 7O7Y_BD_B7 0.86 0.91 1.71 0.37 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 4Y4O_1S_1B 0.65 0.87 2.31 0.26 Ribonuclease H-like 5S ribosomal RNA compare
7O7Y_BD_B7 7OF0_P_B 0.69 0.56 1.89 0.11 Ribonuclease H-like compare
7O7Y_BD_B7 7RYG_N_B 0.60 0.84 2.24 0.18 Ribonuclease H-like 5S ribosomal RNA compare
7O7Y_BD_B7 7O9M_P_B 0.71 0.55 1.95 0.1 Ribonuclease H-like compare
6S0Z_M_B 7O7Y_BD_B7 0.57 0.83 2.02 0.16 Ribonuclease H-like 5S ribosomal RNA compare
6AZ3_O_8 7O7Y_BD_B7 0.92 0.96 0.98 0.67 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 4Y4O_1S_1B 0.63 0.87 2.3 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 7O7Y_BD_B7 0.84 0.91 1.74 0.38 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6S0Z_M_B 0.82 0.89 1.29 0.51 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6AZ3_O_8 0.59 0.83 2.82 0.2 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O7Y_BD_B7 0.57 0.83 2.76 0.14 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O9M_P_B 0.72 0.53 2.72 0.1 Ribonuclease H-like compare
4Y4O_1S_1B 7OF0_P_B 0.72 0.54 2.33 0.11 Ribonuclease H-like compare
4Y4O_1S_1B 7RYG_N_B 0.86 0.91 1.56 0.43 Ribonuclease H-like 5S ribosomal RNA compare