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All interfaces > All interologs > Interface groups > group123 > 4Y4O_1S_1B vs 7O9M_P_B

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1B
7O9M_P
7O9M_B
Conserved?
1S:93 [LYS] 1B:48 [A] P:152 [GLU] B:1639 [U] ✔
1S:31 [SER] 1B:28 [C] P:86 [THR] B:1623 [G] ✔
1S:31 [SER] 1B:29 [A] P:86 [THR] B:1624 [C] ✔
1S:61 [ASN] 1B:50 [G] P:120 [ARG] B:1641 [G] ✔
1S:61 [ASN] 1B:51 [G] P:120 [ARG] B:1642 [G] ✔
1S:92 [TYR] 1B:47 [C] P:151 [TRP] B:1638 [U] ✔
1S:92 [TYR] 1B:48 [A] P:151 [TRP] B:1639 [U] ✔
1S:96 [GLY] 1B:48 [A] P:156 [ASP] B:1639 [U] ✔
1S:96 [GLY] 1B:49 [C] P:156 [ASP] B:1640 [A] ✔
1S:97 [ARG] 1B:49 [C] P:157 [SER] B:1640 [A] ✔
1S:34 [HIS] 1B:27 [C] P:89 [HIS] B:1622 [A] ✔
1S:34 [HIS] 1B:28 [C] P:89 [HIS] B:1623 [G] ✔
1S:32 [LEU] 1B:29 [A] P:87 [GLN] B:1624 [C] ✔
1S:32 [LEU] 1B:30 [C] P:87 [GLN] B:1625 [A] ✔
1S:32 [LEU] 1B:31 [C] P:87 [GLN] B:1626 [C] ✔
1S:32 [LEU] 1B:52 [A] P:87 [GLN] B:1643 [A] ✔
1S:60 [GLY] 1B:51 [G] P:118 [SER] B:1642 [G] ✔
1S:30 [ARG] 1B:29 [A] P:85 [ARG] B:1624 [C] ✔
1S:30 [ARG] 1B:48 [A] P:85 [ARG] B:1639 [U] ✔
1S:30 [ARG] 1B:49 [C] P:85 [ARG] B:1640 [A] ✔
1S:62 [LYS] 1B:50 [G] P:121 [ASN] B:1641 [G] ✔
1S:62 [LYS] 1B:51 [G] P:121 [ASN] B:1642 [G] ✔
1S:33 [LYS] 1B:28 [C] P:88 [HIS] B:1623 [G] ✔
1S:33 [LYS] 1B:29 [A] P:88 [HIS] B:1624 [C] ✔
1S:33 [LYS] 1B:52 [A] P:88 [HIS] B:1643 [A] ✔
1S:95 [HIS] 1B:48 [A] P:155 [SER] B:1639 [U] ✔
1S:95 [HIS] 1B:49 [C] P:155 [SER] B:1640 [A] ✔
1S:63 [THR] 1B:49 [C] P:122 [VAL] B:1640 [A] ✔
1S:63 [THR] 1B:50 [G] P:122 [VAL] B:1641 [G] ✔
1S:54 [LEU] 1B:26 [A] P:108 [ARG] B:1621 [A] ✔
1S:54 [LEU] 1B:27 [C] P:108 [ARG] B:1622 [A] ✔
1S:93 [LYS] 1B:47 [C] P:152 [GLU] B:1638 [U] ❌ 7O9M_P_B
1S:31 [SER] 1B:27 [C] P:86 [THR] B:1622 [A] ❌ 7O9M_P_B
1S:97 [ARG] 1B:48 [A] P:157 [SER] B:1639 [U] ❌ 7O9M_P_B
1S:97 [ARG] 1B:50 [G] P:157 [SER] B:1641 [G] ❌ 7O9M_P_B
1S:32 [LEU] 1B:28 [C] P:87 [GLN] B:1623 [G] ❌ 7O9M_P_B
1S:32 [LEU] 1B:51 [G] P:87 [GLN] B:1642 [G] ❌ 7O9M_P_B
1S:62 [LYS] 1B:52 [A] P:121 [ASN] B:1643 [A] ❌ 7O9M_P_B
1S:33 [LYS] 1B:27 [C] P:88 [HIS] B:1622 [A] ❌ 7O9M_P_B
1S:54 [LEU] 1B:28 [C] P:108 [ARG] B:1623 [G] ❌ 4Y4O_1S_1B
1S:61 [ASN] 1B:52 [A] P:120 [ARG] B:1643 [A] ❌ 4Y4O_1S_1B
1S:33 [LYS] 1B:30 [C] P:88 [HIS] B:1625 [A] ❌ 4Y4O_1S_1B
1S:93 [LYS] 1B:39 [A] P:152 [GLU] B:1631 [C] ❌ 7O9M_B:1631 no longer at interface
1S:33 [LYS] 1B:53 [A] P:88 [HIS] B:1644 [G] ❌ 4Y4O_1B:53 no longer at interface
1S:91 [PRO] 1B:47 [C] P:150 [PRO] B:1638 [U] ❌ 7O9M_P:150 no longer at interface
1S:91 [PRO] 1B:48 [A] P:150 [PRO] B:1639 [U] ❌ 7O9M_P:150 no longer at interface
1S:29 [PHE] 1B:28 [C] P:84 [ILE] B:1623 [G] ❌ 7O9M_P:84 no longer at interface
1S:29 [PHE] 1B:29 [A] P:84 [ILE] B:1624 [C] ❌ 7O9M_P:84 no longer at interface
1S:36 [TYR] 1B:27 [C] P:91 [GLU] B:1622 [A] ❌ 7O9M_P:91 no longer at interface
1S:36 [TYR] 1B:28 [C] P:91 [GLU] B:1623 [G] ❌ 7O9M_P:91 no longer at interface
1S:98 [VAL] 1B:49 [C] P:158 [MET] B:1640 [A] ❌ 7O9M_P:158 no longer at interface
1S:57 [LYS] 1B:26 [A] P:113 [LYS] B:1621 [A] ❌ 4Y4O_1S:57 no longer at interface
1S:57 [LYS] 1B:27 [C] P:113 [LYS] B:1622 [A] ❌ 4Y4O_1S:57 no longer at interface
1S:59 [LYS] 1B:51 [G] P:117 [TYR] B:1642 [G] ❌ 4Y4O_1S:59 no longer at interface
1S:59 [LYS] 1B:52 [A] P:117 [TYR] B:1643 [A] ❌ 4Y4O_1S:59 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.53 2.72 0.10 0.75 0.23 0.8 0.75 0.72 0.46 0.10 0.54


Other pairs involving 4Y4O_1S_1B or 7O9M_P_B

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_N_9 7O9M_P_B 0.66 0.55 1.72 0.1 Ribonuclease H-like compare
1YHQ_N_9 4Y4O_1S_1B 0.65 0.87 2.31 0.26 Ribonuclease H-like 5S ribosomal RNA compare
7O7Y_BD_B7 7O9M_P_B 0.71 0.55 1.95 0.1 Ribonuclease H-like compare
6S0Z_M_B 7O9M_P_B 0.64 0.53 2.99 0.15 Ribonuclease H-like compare
6AZ3_O_8 7O9M_P_B 0.73 0.55 2.06 0.1 Ribonuclease H-like compare
7O9M_P_B 7RYG_N_B 0.65 0.55 1.98 0.2 Ribonuclease H-like compare
7O9M_P_B 7OF0_P_B 0.94 0.98 0.53 0.95 Ribonuclease H-like compare
1VQ8_N_9 4Y4O_1S_1B 0.63 0.87 2.3 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 7O9M_P_B 0.65 0.55 1.74 0.1 Ribonuclease H-like compare
4Y4O_1S_1B 6S0Z_M_B 0.82 0.89 1.29 0.51 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6AZ3_O_8 0.59 0.83 2.82 0.2 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O7Y_BD_B7 0.57 0.83 2.76 0.14 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O9M_P_B 0.72 0.53 2.72 0.1 Ribonuclease H-like compare
4Y4O_1S_1B 7OF0_P_B 0.72 0.54 2.33 0.11 Ribonuclease H-like compare
4Y4O_1S_1B 7RYG_N_B 0.86 0.91 1.56 0.43 Ribonuclease H-like 5S ribosomal RNA compare