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All interfaces > All interologs > Interface groups > group123 > 4Y4O_1S_1B vs 7RYG_N_B

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1B
7RYG_N
7RYG_B
Conserved?
1S:93 [LYS] 1B:38 [C] N:97 [LYS] B:36 [C] ✔
1S:93 [LYS] 1B:47 [C] N:97 [LYS] B:45 [C] ✔
1S:93 [LYS] 1B:48 [A] N:97 [LYS] B:46 [U] ✔
1S:52 [SER] 1B:116 [G] N:53 [SER] B:112 [A] ✔
1S:31 [SER] 1B:28 [C] N:32 [THR] B:26 [C] ✔
1S:31 [SER] 1B:29 [A] N:32 [THR] B:27 [A] ✔
1S:45 [GLY] 1B:9 [G] N:46 [GLY] B:7 [G] ✔
1S:45 [GLY] 1B:113 [G] N:46 [GLY] B:109 [G] ✔
1S:45 [GLY] 1B:114 [C] N:46 [GLY] B:110 [C] ✔
1S:47 [THR] 1B:7 [G] N:48 [VAL] B:5 [G] ✔
1S:47 [THR] 1B:114 [C] N:48 [VAL] B:110 [C] ✔
1S:47 [THR] 1B:115 [G] N:48 [VAL] B:111 [C] ✔
1S:61 [ASN] 1B:50 [G] N:65 [GLY] B:48 [A] ✔
1S:61 [ASN] 1B:51 [G] N:65 [GLY] B:49 [G] ✔
1S:27 [SER] 1B:8 [U] N:28 [CYS] B:6 [C] ✔
1S:10 [ARG] 1B:47 [C] N:11 [ARG] B:45 [C] ✔
1S:55 [ALA] 1B:116 [G] N:56 [ASP] B:112 [A] ✔
1S:55 [ALA] 1B:117 [G] N:56 [ASP] B:113 [G] ✔
1S:92 [TYR] 1B:48 [A] N:96 [PHE] B:46 [U] ✔
1S:96 [GLY] 1B:48 [A] N:100 [GLY] B:46 [U] ✔
1S:96 [GLY] 1B:49 [C] N:100 [GLY] B:47 [C] ✔
1S:97 [ARG] 1B:48 [A] N:101 [ARG] B:46 [U] ✔
1S:97 [ARG] 1B:49 [C] N:101 [ARG] B:47 [C] ✔
1S:97 [ARG] 1B:50 [G] N:101 [ARG] B:48 [A] ✔
1S:34 [HIS] 1B:27 [C] N:35 [HIS] B:25 [C] ✔
1S:34 [HIS] 1B:28 [C] N:35 [HIS] B:26 [C] ✔
1S:29 [PHE] 1B:6 [C] N:30 [ASN] B:4 [G] ✔
1S:29 [PHE] 1B:7 [G] N:30 [ASN] B:5 [G] ✔
1S:19 [LYS] 1B:9 [G] N:20 [ARG] B:7 [G] ✔
1S:36 [TYR] 1B:27 [C] N:37 [TYR] B:25 [C] ✔
1S:36 [TYR] 1B:28 [C] N:37 [TYR] B:26 [C] ✔
1S:50 [SER] 1B:115 [G] N:51 [GLN] B:111 [C] ✔
1S:50 [SER] 1B:116 [G] N:51 [GLN] B:112 [A] ✔
1S:40 [ILE] 1B:8 [U] N:41 [ILE] B:6 [C] ✔
1S:38 [GLN] 1B:7 [G] N:39 [GLN] B:5 [G] ✔
1S:38 [GLN] 1B:8 [U] N:39 [GLN] B:6 [C] ✔
1S:38 [GLN] 1B:115 [G] N:39 [GLN] B:111 [C] ✔
1S:32 [LEU] 1B:29 [A] N:33 [PRO] B:27 [A] ✔
1S:32 [LEU] 1B:30 [C] N:33 [PRO] B:28 [C] ✔
1S:32 [LEU] 1B:51 [G] N:33 [PRO] B:49 [G] ✔
1S:32 [LEU] 1B:52 [A] N:33 [PRO] B:50 [A] ✔
1S:60 [GLY] 1B:51 [G] N:63 [THR] B:49 [G] ✔
1S:30 [ARG] 1B:48 [A] N:31 [ARG] B:46 [U] ✔
1S:30 [ARG] 1B:49 [C] N:31 [ARG] B:47 [C] ✔
1S:62 [LYS] 1B:50 [G] N:66 [ASN] B:48 [A] ✔
1S:62 [LYS] 1B:51 [G] N:66 [ASN] B:49 [G] ✔
1S:25 [ARG] 1B:8 [U] N:26 [ARG] B:6 [C] ✔
1S:25 [ARG] 1B:9 [G] N:26 [ARG] B:7 [G] ✔
1S:33 [LYS] 1B:27 [C] N:34 [ARG] B:25 [C] ✔
1S:33 [LYS] 1B:28 [C] N:34 [ARG] B:26 [C] ✔
1S:33 [LYS] 1B:52 [A] N:34 [ARG] B:50 [A] ✔
1S:15 [ARG] 1B:8 [U] N:16 [ARG] B:6 [C] ✔
1S:15 [ARG] 1B:9 [G] N:16 [ARG] B:7 [G] ✔
1S:95 [HIS] 1B:37 [C] N:99 [HIS] B:35 [C] ✔
1S:95 [HIS] 1B:38 [C] N:99 [HIS] B:36 [C] ✔
1S:95 [HIS] 1B:48 [A] N:99 [HIS] B:46 [U] ✔
1S:95 [HIS] 1B:49 [C] N:99 [HIS] B:47 [C] ✔
1S:63 [THR] 1B:49 [C] N:67 [ILE] B:47 [C] ✔
1S:63 [THR] 1B:50 [G] N:67 [ILE] B:48 [A] ✔
1S:54 [LEU] 1B:27 [C] N:55 [LEU] B:25 [C] ✔
1S:54 [LEU] 1B:117 [G] N:55 [LEU] B:113 [G] ✔
1S:46 [VAL] 1B:114 [C] N:47 [LYS] B:110 [C] ✔
1S:31 [SER] 1B:27 [C] N:32 [THR] B:25 [C] ❌ 7RYG_N_B
1S:27 [SER] 1B:7 [G] N:28 [CYS] B:5 [G] ❌ 7RYG_N_B
1S:10 [ARG] 1B:46 [A] N:11 [ARG] B:44 [A] ❌ 7RYG_N_B
1S:92 [TYR] 1B:47 [C] N:96 [PHE] B:45 [C] ❌ 7RYG_N_B
1S:29 [PHE] 1B:28 [C] N:30 [ASN] B:26 [C] ❌ 7RYG_N_B
1S:29 [PHE] 1B:29 [A] N:30 [ASN] B:27 [A] ❌ 7RYG_N_B
1S:19 [LYS] 1B:8 [U] N:20 [ARG] B:6 [C] ❌ 7RYG_N_B
1S:36 [TYR] 1B:6 [C] N:37 [TYR] B:4 [G] ❌ 7RYG_N_B
1S:36 [TYR] 1B:116 [G] N:37 [TYR] B:112 [A] ❌ 7RYG_N_B
1S:38 [GLN] 1B:114 [C] N:39 [GLN] B:110 [C] ❌ 7RYG_N_B
1S:32 [LEU] 1B:28 [C] N:33 [PRO] B:26 [C] ❌ 7RYG_N_B
1S:30 [ARG] 1B:29 [A] N:31 [ARG] B:27 [A] ❌ 7RYG_N_B
1S:62 [LYS] 1B:52 [A] N:66 [ASN] B:50 [A] ❌ 7RYG_N_B
1S:33 [LYS] 1B:29 [A] N:34 [ARG] B:27 [A] ❌ 7RYG_N_B
1S:15 [ARG] 1B:7 [G] N:16 [ARG] B:5 [G] ❌ 7RYG_N_B
1S:54 [LEU] 1B:26 [A] N:55 [LEU] B:24 [A] ❌ 7RYG_N_B
1S:46 [VAL] 1B:113 [G] N:47 [LYS] B:109 [G] ❌ 7RYG_N_B
1S:98 [VAL] 1B:49 [C] N:102 [ILE] B:47 [C] ❌ 7RYG_N_B
1S:98 [VAL] 1B:48 [A] N:102 [ILE] B:46 [U] ❌ 4Y4O_1S_1B
1S:30 [ARG] 1B:47 [C] N:31 [ARG] B:45 [C] ❌ 4Y4O_1S_1B
1S:54 [LEU] 1B:116 [G] N:55 [LEU] B:112 [A] ❌ 4Y4O_1S_1B
1S:93 [LYS] 1B:39 [A] N:97 [LYS] B:37 [U] ❌ 7RYG_B:37 no longer at interface
1S:32 [LEU] 1B:31 [C] N:33 [PRO] B:29 [C] ❌ 7RYG_B:29 no longer at interface
1S:19 [LYS] 1B:10 [C] N:20 [ARG] B:8 [A] ❌ 4Y4O_1B:10 no longer at interface
1S:7 [TYR] 1B:47 [C] N:8 [ARG] B:45 [C] ❌ 7RYG_N:8 no longer at interface
1S:91 [PRO] 1B:47 [C] N:95 [GLY] B:45 [C] ❌ 7RYG_N:95 no longer at interface
1S:91 [PRO] 1B:48 [A] N:95 [GLY] B:46 [U] ❌ 7RYG_N:95 no longer at interface
1S:11 [LYS] 1B:7 [G] N:12 [ALA] B:5 [G] ❌ 7RYG_N:12 no longer at interface
1S:11 [LYS] 1B:8 [U] N:12 [ALA] B:6 [C] ❌ 7RYG_N:12 no longer at interface
1S:42 [ASP] 1B:8 [U] N:43 [ALA] B:6 [C] ❌ 7RYG_N:43 no longer at interface
1S:42 [ASP] 1B:9 [G] N:43 [ALA] B:7 [G] ❌ 7RYG_N:43 no longer at interface
1S:43 [GLU] 1B:9 [G] N:44 [ASP] B:7 [G] ❌ 4Y4O_1S:43 no longer at interface
1S:44 [LYS] 1B:9 [G] N:45 [GLY] B:7 [G] ❌ 4Y4O_1S:44 no longer at interface
1S:44 [LYS] 1B:8 [U] N:45 [GLY] B:6 [C] ❌ 4Y4O_1S:44 no longer at interface
1S:44 [LYS] 1B:113 [G] N:45 [GLY] B:109 [G] ❌ 4Y4O_1S:44 no longer at interface
1S:4 [LEU] 1B:7 [G] N:5 [LYS] B:5 [G] ❌ 4Y4O_1S:4 no longer at interface
1S:4 [LEU] 1B:6 [C] N:5 [LYS] B:4 [G] ❌ 4Y4O_1S:4 no longer at interface
1S:8 [GLU] 1B:8 [U] N:9 [LEU] B:6 [C] ❌ 4Y4O_1S:8 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 5S ribosomal RNA 0.91 1.56 0.43 0.9 0.83 0.89 0.92 0.86 0.54 0.48 0.45


Other pairs involving 4Y4O_1S_1B or 7RYG_N_B

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_N_9 4Y4O_1S_1B 0.65 0.87 2.31 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 4Y4O_1S_1B 0.63 0.87 2.3 0.26 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6AZ3_O_8 0.59 0.83 2.82 0.2 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 6S0Z_M_B 0.82 0.89 1.29 0.51 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O7Y_BD_B7 0.57 0.83 2.76 0.14 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7O9M_P_B 0.72 0.53 2.72 0.1 Ribonuclease H-like compare
4Y4O_1S_1B 7OF0_P_B 0.72 0.54 2.33 0.11 Ribonuclease H-like compare
1YHQ_N_9 7RYG_N_B 0.65 0.86 1.69 0.18 Ribonuclease H-like 5S ribosomal RNA compare
7O7Y_BD_B7 7RYG_N_B 0.60 0.84 2.24 0.18 Ribonuclease H-like 5S ribosomal RNA compare
6S0Z_M_B 7RYG_N_B 0.74 0.9 1.66 0.41 Ribonuclease H-like 5S ribosomal RNA compare
6AZ3_O_8 7RYG_N_B 0.66 0.84 2.31 0.21 Ribonuclease H-like 5S ribosomal RNA compare
7O9M_P_B 7RYG_N_B 0.65 0.55 1.98 0.2 Ribonuclease H-like compare
7OF0_P_B 7RYG_N_B 0.63 0.56 1.99 0.21 Ribonuclease H-like compare
1VQ8_N_9 7RYG_N_B 0.63 0.86 1.72 0.18 Ribonuclease H-like 5S ribosomal RNA compare
4Y4O_1S_1B 7RYG_N_B 0.86 0.91 1.56 0.43 Ribonuclease H-like 5S ribosomal RNA compare