Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
7O9M_P
|
7O9M_B
|
7OF0_P
|
7OF0_B
|
Conserved?
|
---|---|---|---|---|
P:152 [GLU] | B:1639 [U] | P:152 [GLU] | B:1639 [U] | ✔ |
P:121 [ASN] | B:1641 [G] | P:121 [ASN] | B:1641 [G] | ✔ |
P:108 [ARG] | B:1621 [A] | P:108 [ARG] | B:1621 [A] | ✔ |
P:108 [ARG] | B:1622 [A] | P:108 [ARG] | B:1622 [A] | ✔ |
P:113 [LYS] | B:1621 [A] | P:113 [LYS] | B:1621 [A] | ✔ |
P:113 [LYS] | B:1622 [A] | P:113 [LYS] | B:1622 [A] | ✔ |
P:156 [ASP] | B:1639 [U] | P:156 [ASP] | B:1639 [U] | ✔ |
P:156 [ASP] | B:1640 [A] | P:156 [ASP] | B:1640 [A] | ✔ |
P:118 [SER] | B:1642 [G] | P:118 [SER] | B:1642 [G] | ✔ |
P:155 [SER] | B:1639 [U] | P:155 [SER] | B:1639 [U] | ✔ |
P:155 [SER] | B:1640 [A] | P:155 [SER] | B:1640 [A] | ✔ |
P:89 [HIS] | B:1622 [A] | P:89 [HIS] | B:1622 [A] | ✔ |
P:89 [HIS] | B:1623 [G] | P:89 [HIS] | B:1623 [G] | ✔ |
P:151 [TRP] | B:1638 [U] | P:151 [TRP] | B:1638 [U] | ✔ |
P:151 [TRP] | B:1639 [U] | P:151 [TRP] | B:1639 [U] | ✔ |
P:85 [ARG] | B:1624 [C] | P:85 [ARG] | B:1624 [C] | ✔ |
P:85 [ARG] | B:1640 [A] | P:85 [ARG] | B:1640 [A] | ✔ |
P:122 [VAL] | B:1640 [A] | P:122 [VAL] | B:1640 [A] | ✔ |
P:122 [VAL] | B:1641 [G] | P:122 [VAL] | B:1641 [G] | ✔ |
P:120 [ARG] | B:1641 [G] | P:120 [ARG] | B:1641 [G] | ✔ |
P:120 [ARG] | B:1642 [G] | P:120 [ARG] | B:1642 [G] | ✔ |
P:120 [ARG] | B:1643 [A] | P:120 [ARG] | B:1643 [A] | ✔ |
P:86 [THR] | B:1623 [G] | P:86 [THR] | B:1623 [G] | ✔ |
P:86 [THR] | B:1624 [C] | P:86 [THR] | B:1624 [C] | ✔ |
P:88 [HIS] | B:1623 [G] | P:88 [HIS] | B:1623 [G] | ✔ |
P:88 [HIS] | B:1624 [C] | P:88 [HIS] | B:1624 [C] | ✔ |
P:88 [HIS] | B:1643 [A] | P:88 [HIS] | B:1643 [A] | ✔ |
P:88 [HIS] | B:1644 [G] | P:88 [HIS] | B:1644 [G] | ✔ |
P:117 [TYR] | B:1642 [G] | P:117 [TYR] | B:1642 [G] | ✔ |
P:117 [TYR] | B:1643 [A] | P:117 [TYR] | B:1643 [A] | ✔ |
P:87 [GLN] | B:1624 [C] | P:87 [GLN] | B:1624 [C] | ✔ |
P:87 [GLN] | B:1625 [A] | P:87 [GLN] | B:1625 [A] | ✔ |
P:87 [GLN] | B:1626 [C] | P:87 [GLN] | B:1626 [C] | ✔ |
P:87 [GLN] | B:1643 [A] | P:87 [GLN] | B:1643 [A] | ✔ |
P:157 [SER] | B:1640 [A] | P:157 [SER] | B:1640 [A] | ✔ |
P:121 [ASN] | B:1642 [G] | P:121 [ASN] | B:1642 [G] | ❌ 7OF0_P_B |
P:108 [ARG] | B:1623 [G] | P:108 [ARG] | B:1623 [G] | ❌ 7OF0_P_B |
P:85 [ARG] | B:1639 [U] | P:85 [ARG] | B:1639 [U] | ❌ 7OF0_P_B |
P:88 [HIS] | B:1625 [A] | P:88 [HIS] | B:1625 [A] | ❌ 7OF0_P_B |
P:110 [TRP] | B:1621 [A] | P:110 [TRP] | B:1621 [A] | ❌ 7O9M_P_B |
P:157 [SER] | B:1639 [U] | P:157 [SER] | B:1639 [U] | ❌ 7O9M_P_B |
P:86 [THR] | B:1622 [A] | P:86 [THR] | B:1622 [A] | ❌ 7O9M_P_B |
P:87 [GLN] | B:1644 [G] | P:87 [GLN] | B:1644 [G] | ❌ 7O9M_P_B |
P:87 [GLN] | B:1623 [G] | P:87 [GLN] | B:1623 [G] | ❌ 7O9M_P_B |
P:87 [GLN] | B:1642 [G] | P:87 [GLN] | B:1642 [G] | ❌ 7O9M_P_B |
P:89 [HIS] | B:1621 [A] | P:89 [HIS] | B:1621 [A] | ❌ 7O9M_P_B |
P:88 [HIS] | B:1610 [A] | P:88 [HIS] | B:1610 [A] | ❌ 7OF0_B:1610 no longer at interface |
P:158 [MET] | B:1640 [A] | P:158 [MET] | B:1640 [A] | ❌ 7O9M_P:158 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribonuclease H-like | 0.98 | 0.53 | 0.95 | 0.99 | 0.85 | 0.95 | 1.0 | 0.94 | 0.91 | 0.35 | 0.15 |
Other pairs involving 7O9M_P_B or 7OF0_P_B
Total number of entries: 15