Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
View
Focus on
InterfaceRNA
Protein
All
Show chains
Interface
show interface as licoriceCommon contacts -
7OF0_P
|
7OF0_B
|
7RYG_N
|
7RYG_B
|
Conserved?
|
---|---|---|---|---|
P:152 [GLU] | B:1639 [U] | N:97 [LYS] | B:46 [U] | ✔ |
P:121 [ASN] | B:1641 [G] | N:66 [ASN] | B:48 [A] | ✔ |
P:108 [ARG] | B:1622 [A] | N:55 [LEU] | B:25 [C] | ✔ |
P:113 [LYS] | B:1621 [A] | N:60 [ARG] | B:24 [A] | ✔ |
P:113 [LYS] | B:1622 [A] | N:60 [ARG] | B:25 [C] | ✔ |
P:156 [ASP] | B:1639 [U] | N:100 [GLY] | B:46 [U] | ✔ |
P:156 [ASP] | B:1640 [A] | N:100 [GLY] | B:47 [C] | ✔ |
P:118 [SER] | B:1642 [G] | N:63 [THR] | B:49 [G] | ✔ |
P:155 [SER] | B:1639 [U] | N:99 [HIS] | B:46 [U] | ✔ |
P:155 [SER] | B:1640 [A] | N:99 [HIS] | B:47 [C] | ✔ |
P:89 [HIS] | B:1622 [A] | N:35 [HIS] | B:25 [C] | ✔ |
P:89 [HIS] | B:1623 [G] | N:35 [HIS] | B:26 [C] | ✔ |
P:151 [TRP] | B:1639 [U] | N:96 [PHE] | B:46 [U] | ✔ |
P:85 [ARG] | B:1640 [A] | N:31 [ARG] | B:47 [C] | ✔ |
P:122 [VAL] | B:1640 [A] | N:67 [ILE] | B:47 [C] | ✔ |
P:122 [VAL] | B:1641 [G] | N:67 [ILE] | B:48 [A] | ✔ |
P:120 [ARG] | B:1641 [G] | N:65 [GLY] | B:48 [A] | ✔ |
P:120 [ARG] | B:1642 [G] | N:65 [GLY] | B:49 [G] | ✔ |
P:86 [THR] | B:1623 [G] | N:32 [THR] | B:26 [C] | ✔ |
P:86 [THR] | B:1624 [C] | N:32 [THR] | B:27 [A] | ✔ |
P:88 [HIS] | B:1623 [G] | N:34 [ARG] | B:26 [C] | ✔ |
P:88 [HIS] | B:1643 [A] | N:34 [ARG] | B:50 [A] | ✔ |
P:87 [GLN] | B:1624 [C] | N:33 [PRO] | B:27 [A] | ✔ |
P:87 [GLN] | B:1625 [A] | N:33 [PRO] | B:28 [C] | ✔ |
P:87 [GLN] | B:1642 [G] | N:33 [PRO] | B:49 [G] | ✔ |
P:87 [GLN] | B:1643 [A] | N:33 [PRO] | B:50 [A] | ✔ |
P:157 [SER] | B:1639 [U] | N:101 [ARG] | B:46 [U] | ✔ |
P:157 [SER] | B:1640 [A] | N:101 [ARG] | B:47 [C] | ✔ |
P:108 [ARG] | B:1621 [A] | N:55 [LEU] | B:24 [A] | ❌ 7RYG_N_B |
P:89 [HIS] | B:1621 [A] | N:35 [HIS] | B:24 [A] | ❌ 7RYG_N_B |
P:151 [TRP] | B:1638 [U] | N:96 [PHE] | B:45 [C] | ❌ 7RYG_N_B |
P:158 [MET] | B:1640 [A] | N:102 [ILE] | B:47 [C] | ❌ 7RYG_N_B |
P:85 [ARG] | B:1624 [C] | N:31 [ARG] | B:27 [A] | ❌ 7RYG_N_B |
P:120 [ARG] | B:1643 [A] | N:65 [GLY] | B:50 [A] | ❌ 7RYG_N_B |
P:86 [THR] | B:1622 [A] | N:32 [THR] | B:25 [C] | ❌ 7RYG_N_B |
P:88 [HIS] | B:1624 [C] | N:34 [ARG] | B:27 [A] | ❌ 7RYG_N_B |
P:87 [GLN] | B:1623 [G] | N:33 [PRO] | B:26 [C] | ❌ 7RYG_N_B |
P:157 [SER] | B:1641 [G] | N:101 [ARG] | B:48 [A] | ❌ 7OF0_P_B |
P:158 [MET] | B:1639 [U] | N:102 [ILE] | B:46 [U] | ❌ 7OF0_P_B |
P:85 [ARG] | B:1639 [U] | N:31 [ARG] | B:46 [U] | ❌ 7OF0_P_B |
P:85 [ARG] | B:1638 [U] | N:31 [ARG] | B:45 [C] | ❌ 7OF0_P_B |
P:88 [HIS] | B:1622 [A] | N:34 [ARG] | B:25 [C] | ❌ 7OF0_P_B |
P:121 [ASN] | B:1642 [G] | N:66 [ASN] | B:49 [G] | ❌ 7OF0_P_B |
P:152 [GLU] | B:1638 [U] | N:97 [LYS] | B:45 [C] | ❌ 7OF0_P_B |
P:88 [HIS] | B:1644 [G] | N:34 [ARG] | B:51 [A] | ❌ 7RYG_B:51 no longer at interface |
P:87 [GLN] | B:1626 [C] | N:33 [PRO] | B:29 [C] | ❌ 7RYG_B:29 no longer at interface |
P:87 [GLN] | B:1644 [G] | N:33 [PRO] | B:51 [A] | ❌ 7RYG_B:51 no longer at interface |
P:110 [TRP] | B:1621 [A] | N:57 [ALA] | B:24 [A] | ❌ 7RYG_N:57 no longer at interface |
P:117 [TYR] | B:1642 [G] | N:62 [GLY] | B:49 [G] | ❌ 7RYG_N:62 no longer at interface |
P:117 [TYR] | B:1643 [A] | N:62 [GLY] | B:50 [A] | ❌ 7RYG_N:62 no longer at interface |
P:91 [GLU] | B:1622 [A] | N:37 [TYR] | B:25 [C] | ❌ 7OF0_P:91 no longer at interface |
P:91 [GLU] | B:1623 [G] | N:37 [TYR] | B:26 [C] | ❌ 7OF0_P:91 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribonuclease H-like | 0.56 | 1.99 | 0.21 | 0.77 | 0.26 | 0.89 | 0.85 | 0.63 | 0.35 | 0.24 | 0.33 |
Other pairs involving 7OF0_P_B or 7RYG_N_B
Total number of entries: 15