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All interfaces > All interologs > Interface groups > group124 > 1YHQ_W_0 vs 7RYG_Y_A

Interface analysis


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Common contacts -

1YHQ_W
1YHQ_0
7RYG_Y
7RYG_A
Conserved?
W:11 [VAL] 0:1068 [C] Y:13 [SER] A:967 [U] ✔
W:11 [VAL] 0:1086 [A] Y:13 [SER] A:985 [A] ✔
W:11 [VAL] 0:1087 [G] Y:13 [SER] A:986 [G] ✔
W:20 [THR] 0:944 [G] Y:22 [CYS] A:848 [C] ✔
W:43 [GLY] 0:945 [U] Y:45 [GLY] A:849 [C] ✔
W:43 [GLY] 0:946 [C] Y:45 [GLY] A:850 [A] ✔
W:27 [HIS] 0:1288 [U] Y:29 [ARG] A:1178 [C] ✔
W:28 [HIS] 0:1262 [C] Y:30 [ARG] A:1156 [C] ✔
W:28 [HIS] 0:1288 [U] Y:30 [ARG] A:1178 [C] ✔
W:44 [MET] 0:944 [G] Y:46 [MET] A:848 [C] ✔
W:44 [MET] 0:945 [U] Y:46 [MET] A:849 [C] ✔
W:44 [MET] 0:1023 [C] Y:46 [MET] A:925 [A] ✔
W:44 [MET] 0:1024 [G] Y:46 [MET] A:926 [G] ✔
W:22 [GLU] 0:1025 [C] Y:24 [GLN] A:927 [U] ✔
W:12 [ASN] 0:1067 [A] Y:14 [HIS] A:966 [G] ✔
W:12 [ASN] 0:1068 [C] Y:14 [HIS] A:967 [U] ✔
W:12 [ASN] 0:1085 [C] Y:14 [HIS] A:984 [C] ✔
W:12 [ASN] 0:1086 [A] Y:14 [HIS] A:985 [A] ✔
W:23 [MET] 0:944 [G] Y:25 [GLY] A:848 [C] ✔
W:23 [MET] 0:1024 [G] Y:25 [GLY] A:926 [G] ✔
W:23 [MET] 0:1025 [C] Y:25 [GLY] A:927 [U] ✔
W:9 [GLY] 0:1086 [A] Y:11 [SER] A:985 [A] ✔
W:9 [GLY] 0:1087 [G] Y:11 [SER] A:986 [G] ✔
W:19 [ASP] 0:944 [G] Y:21 [LEU] A:848 [C] ✔
W:47 [LYS] 0:945 [U] Y:49 [LYS] A:849 [C] ✔
W:14 [HIS] 0:1066 [U] Y:16 [LEU] A:965 [A] ✔
W:40 [ALA] 0:945 [U] Y:42 [SER] A:849 [C] ✔
W:40 [ALA] 0:946 [C] Y:42 [SER] A:850 [A] ✔
W:40 [ALA] 0:1022 [A] Y:42 [SER] A:924 [G] ✔
W:40 [ALA] 0:1023 [C] Y:42 [SER] A:925 [A] ✔
W:41 [TYR] 0:945 [U] Y:43 [ASN] A:849 [C] ✔
W:41 [TYR] 0:1023 [C] Y:43 [ASN] A:925 [A] ✔
W:41 [TYR] 0:1024 [G] Y:43 [ASN] A:926 [G] ✔
W:16 [ASP] 0:944 [G] Y:18 [ASN] A:848 [C] ✔
W:7 [LEU] 0:1086 [A] Y:10 [LYS] A:985 [A] ✔
W:24 [LEU] 0:1024 [G] Y:26 [LEU] A:926 [G] ✔
W:13 [MET] 0:1067 [A] Y:15 [ARG] A:966 [G] ✔
W:29 [VAL] 0:1086 [A] Y:31 [ILE] A:985 [A] ✔
W:29 [VAL] 0:1087 [G] Y:31 [ILE] A:986 [G] ✔
W:29 [VAL] 0:1261 [A] Y:31 [ILE] A:1155 [G] ✔
W:29 [VAL] 0:1262 [C] Y:31 [ILE] A:1156 [C] ✔
W:15 [THR] 0:1067 [A] Y:17 [LYS] A:966 [G] ✔
W:25 [ASN] 0:1025 [C] Y:27 [GLY] A:927 [U] ✔
W:10 [GLU] 0:1087 [G] Y:12 [SER] A:986 [G] ✔
W:9 [GLY] 0:1085 [C] Y:11 [SER] A:984 [C] ❌ 7RYG_Y_A
W:47 [LYS] 0:944 [G] Y:49 [LYS] A:848 [C] ❌ 7RYG_Y_A
W:14 [HIS] 0:1067 [A] Y:16 [LEU] A:966 [G] ❌ 7RYG_Y_A
W:13 [MET] 0:1068 [C] Y:15 [ARG] A:967 [U] ❌ 7RYG_Y_A
W:15 [THR] 0:1066 [U] Y:17 [LYS] A:965 [A] ❌ 7RYG_Y_A
W:25 [ASN] 0:1024 [G] Y:27 [GLY] A:926 [G] ❌ 7RYG_Y_A
W:10 [GLU] 0:1068 [C] Y:12 [SER] A:967 [U] ❌ 7RYG_Y_A
W:13 [MET] 0:1086 [A] Y:15 [ARG] A:985 [A] ❌ 1YHQ_W_0
W:13 [MET] 0:1085 [C] Y:15 [ARG] A:984 [C] ❌ 1YHQ_W_0
W:16 [ASP] 0:945 [U] Y:18 [ASN] A:849 [C] ❌ 1YHQ_W_0
W:20 [THR] 0:945 [U] Y:22 [CYS] A:849 [C] ❌ 1YHQ_W_0
W:22 [GLU] 0:1026 [U] Y:24 [GLN] A:928 [A] ❌ 1YHQ_W_0
W:24 [LEU] 0:1025 [C] Y:26 [LEU] A:927 [U] ❌ 1YHQ_W_0
W:28 [HIS] 0:1263 [C] Y:30 [ARG] A:1157 [U] ❌ 1YHQ_W_0
W:12 [ASN] 0:1084 [C] Y:14 [HIS] A:983 [C] ❌ 7RYG_A:983 no longer at interface
W:15 [THR] 0:942 [U] Y:17 [LYS] A:847 [A] ❌ 1YHQ_0:942 no longer at interface
W:19 [ASP] 0:942 [U] Y:21 [LEU] A:847 [A] ❌ 1YHQ_0:942 no longer at interface
W:27 [HIS] 0:1289 [C] Y:29 [ARG] A:1179 [G] ❌ 1YHQ_0:1289 no longer at interface
W:28 [HIS] 0:1289 [C] Y:30 [ARG] A:1179 [G] ❌ 1YHQ_0:1289 no longer at interface
W:31 [HIS] 0:1262 [C] Y:33 [HIS] A:1156 [C] ❌ 7RYG_Y:33 no longer at interface
W:31 [HIS] 0:1263 [C] Y:33 [HIS] A:1157 [U] ❌ 7RYG_Y:33 no longer at interface
W:30 [ASN] 0:1262 [C] Y:32 [GLY] A:1156 [C] ❌ 7RYG_Y:32 no longer at interface
W:42 [ARG] 0:945 [U] Y:44 [ARG] A:849 [C] ❌ 7RYG_Y:44 no longer at interface
W:37 [GLU] 0:1023 [C] Y:40 [THR] A:925 [A] ❌ 1YHQ_W:37 no longer at interface
W:38 [THR] 0:945 [U] Y:41 [PRO] A:849 [C] ❌ 1YHQ_W:38 no longer at interface
W:38 [THR] 0:946 [C] Y:41 [PRO] A:850 [A] ❌ 1YHQ_W:38 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 0.92 2.65 0.15 0.85 0.92 0.88 0.9 0.79 0.52 0.13 0.46


Other pairs involving 1YHQ_W_0 or 7RYG_Y_A

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_W_0 6S0Z_X_A 0.68 0.9 1.63 0.27 Ribosomal protein L30p/L7e compare
1YHQ_W_0 7K00_y_a 0.71 0.91 1.82 0.23 Ribosomal protein L30p/L7e compare
1YHQ_W_0 4Y4O_13_1A 0.75 0.9 2.44 0.15 Ribosomal protein L30p/L7e compare
1YHQ_W_0 6AZ3_c_1 0.55 0.75 1.77 0.17 Ribosomal protein L30p/L7e compare
1YHQ_W_0 7O7Y_BF_B5 0.64 0.94 1.51 0.22 Ribosomal protein L30p/L7e compare
1YHQ_W_0 7RYG_Y_A 0.79 0.92 2.65 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 7RYG_Y_A 0.78 0.92 2.64 0.15 Ribosomal protein L30p/L7e compare
7OF0_Z_A 7RYG_Y_A 0.37 0.89 3.29 0.15 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6AZ3_c_1 7RYG_Y_A 0.57 0.63 2.5 0.19 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 7RYG_Y_A 0.66 0.96 3.31 0.31 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6S0Z_X_A 7RYG_Y_A 0.68 0.98 2.14 0.27 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare