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All interfaces > All interologs > Interface groups > group124 > 4Y4O_13_1A vs 6AZ3_c_1

Interface analysis


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Common contacts -

4Y4O_13
4Y4O_1A
6AZ3_c
6AZ3_1
Conserved?
13:13 [ILE] 1A:1015 [C] c:103 [ALA] 1:1197 [G] ✔
13:13 [ILE] 1A:1034 [A] c:103 [ALA] 1:1215 [C] ✔
13:13 [ILE] 1A:1035 [G] c:103 [ALA] 1:1216 [U] ✔
13:10 [LYS] 1A:1033 [G] c:100 [ARG] 1:1214 [G] ✔
13:10 [LYS] 1A:1034 [A] c:100 [ARG] 1:1215 [C] ✔
13:11 [SER] 1A:1034 [A] c:101 [GLY] 1:1215 [C] ✔
13:11 [SER] 1A:1035 [G] c:101 [GLY] 1:1216 [U] ✔
13:31 [LEU] 1A:1034 [A] c:121 [ILE] 1:1215 [C] ✔
13:31 [LEU] 1A:1035 [G] c:121 [ILE] 1:1216 [U] ✔
13:31 [LEU] 1A:1203 [G] c:121 [ILE] 1:1402 [U] ✔
13:31 [LEU] 1A:1204 [C] c:121 [ILE] 1:1403 [A] ✔
13:24 [LYS] 1A:976 [G] c:114 [GLN] 1:1159 [A] ✔
13:18 [ASP] 1A:897 [C] c:108 [LYS] 1:1035 [G] ✔
13:18 [ASP] 1A:898 [U] c:108 [LYS] 1:1036 [U] ✔
13:45 [GLY] 1A:898 [U] c:136 [MET] 1:1036 [U] ✔
13:45 [GLY] 1A:899 [G] c:136 [MET] 1:1037 [A] ✔
13:25 [ALA] 1A:896 [A] c:115 [LEU] 1:1034 [A] ✔
13:25 [ALA] 1A:974 [G] c:115 [LEU] 1:1157 [U] ✔
13:21 [ALA] 1A:896 [A] c:111 [LYS] 1:1034 [A] ✔
13:21 [ALA] 1A:897 [C] c:111 [LYS] 1:1035 [G] ✔
13:16 [PRO] 1A:1013 [G] c:106 [ASN] 1:1195 [A] ✔
13:16 [PRO] 1A:1014 [U] c:106 [ASN] 1:1196 [G] ✔
13:17 [LYS] 1A:1013 [G] c:107 [PRO] 1:1195 [A] ✔
13:17 [LYS] 1A:1014 [U] c:107 [PRO] 1:1196 [G] ✔
13:40 [THR] 1A:973 [G] c:130 [ASN] 1:1156 [A] ✔
13:15 [TYR] 1A:1014 [U] c:105 [VAL] 1:1196 [G] ✔
13:15 [TYR] 1A:1015 [C] c:105 [VAL] 1:1197 [G] ✔
13:29 [ARG] 1A:976 [G] c:119 [ARG] 1:1159 [A] ✔
13:29 [ARG] 1A:977 [G] c:119 [ARG] 1:1160 [G] ✔
13:9 [VAL] 1A:1034 [A] c:99 [ILE] 1:1215 [C] ✔
13:42 [ALA] 1A:899 [G] c:133 [MET] 1:1037 [A] ✔
13:42 [ALA] 1A:973 [G] c:133 [MET] 1:1156 [A] ✔
13:32 [GLN] 1A:1204 [C] c:122 [PHE] 1:1403 [A] ✔
13:20 [LYS] 1A:1014 [U] c:110 [ARG] 1:1196 [G] ✔
13:41 [PRO] 1A:899 [G] c:132 [PRO] 1:1037 [A] ✔
13:30 [ARG] 1A:1204 [C] c:120 [GLN] 1:1403 [A] ✔
13:30 [ARG] 1A:1205 [U] c:120 [GLN] 1:1404 [U] ✔
13:12 [PRO] 1A:1035 [G] c:102 [ILE] 1:1216 [U] ✔
13:14 [GLY] 1A:1014 [U] c:104 [LYS] 1:1196 [G] ✔
13:14 [GLY] 1A:1015 [C] c:104 [LYS] 1:1197 [G] ✔
13:13 [ILE] 1A:1014 [U] c:103 [ALA] 1:1196 [G] ❌ 6AZ3_c_1
13:24 [LYS] 1A:896 [A] c:114 [GLN] 1:1034 [A] ❌ 6AZ3_c_1
13:24 [LYS] 1A:974 [G] c:114 [GLN] 1:1157 [U] ❌ 6AZ3_c_1
13:24 [LYS] 1A:977 [G] c:114 [GLN] 1:1160 [G] ❌ 6AZ3_c_1
13:25 [ALA] 1A:897 [C] c:115 [LEU] 1:1035 [G] ❌ 6AZ3_c_1
13:25 [ALA] 1A:973 [G] c:115 [LEU] 1:1156 [A] ❌ 6AZ3_c_1
13:15 [TYR] 1A:1033 [G] c:105 [VAL] 1:1214 [G] ❌ 6AZ3_c_1
13:29 [ARG] 1A:1228 [G] c:119 [ARG] 1:1454 [C] ❌ 6AZ3_c_1
13:42 [ALA] 1A:898 [U] c:133 [MET] 1:1036 [U] ❌ 6AZ3_c_1
13:20 [LYS] 1A:1015 [C] c:110 [ARG] 1:1197 [G] ❌ 6AZ3_c_1
13:41 [PRO] 1A:898 [U] c:132 [PRO] 1:1036 [U] ❌ 6AZ3_c_1
13:30 [ARG] 1A:1228 [G] c:120 [GLN] 1:1454 [C] ❌ 6AZ3_c_1
13:12 [PRO] 1A:1015 [C] c:102 [ILE] 1:1197 [G] ❌ 6AZ3_c_1
13:22 [ALA] 1A:897 [C] c:112 [ILE] 1:1035 [G] ❌ 6AZ3_c_1
13:17 [LYS] 1A:897 [C] c:107 [PRO] 1:1035 [G] ❌ 4Y4O_13_1A
13:18 [ASP] 1A:899 [G] c:108 [LYS] 1:1037 [A] ❌ 4Y4O_13_1A
13:20 [LYS] 1A:897 [C] c:110 [ARG] 1:1035 [G] ❌ 4Y4O_13_1A
13:21 [ALA] 1A:898 [U] c:111 [LYS] 1:1036 [U] ❌ 4Y4O_13_1A
13:22 [ALA] 1A:898 [U] c:112 [ILE] 1:1036 [U] ❌ 4Y4O_13_1A
13:25 [ALA] 1A:898 [U] c:115 [LEU] 1:1036 [U] ❌ 4Y4O_13_1A
13:30 [ARG] 1A:976 [G] c:120 [GLN] 1:1159 [A] ❌ 4Y4O_13_1A
13:30 [ARG] 1A:1203 [G] c:120 [GLN] 1:1402 [U] ❌ 4Y4O_13_1A
13:41 [PRO] 1A:973 [G] c:132 [PRO] 1:1156 [A] ❌ 4Y4O_13_1A
13:42 [ALA] 1A:974 [G] c:133 [MET] 1:1157 [U] ❌ 4Y4O_13_1A
13:45 [GLY] 1A:973 [G] c:136 [MET] 1:1156 [A] ❌ 4Y4O_13_1A
13:45 [GLY] 1A:974 [G] c:136 [MET] 1:1157 [U] ❌ 4Y4O_13_1A
13:24 [LYS] 1A:895 [G] c:114 [GLN] 1:1033 [A] ❌ 6AZ3_1:1033 no longer at interface
13:24 [LYS] 1A:978 [A] c:114 [GLN] 1:1161 [A] ❌ 6AZ3_1:1161 no longer at interface
13:29 [ARG] 1A:1229 [G] c:119 [ARG] 1:1455 [G] ❌ 6AZ3_1:1455 no longer at interface
13:42 [ALA] 1A:972 [A] c:133 [MET] 1:1150 [A] ❌ 6AZ3_1:1150 no longer at interface
13:30 [ARG] 1A:1229 [G] c:120 [GLN] 1:1455 [G] ❌ 6AZ3_1:1455 no longer at interface
13:10 [LYS] 1A:1032 [C] c:100 [ARG] 1:1213 [C] ❌ 4Y4O_1A:1032 no longer at interface
13:14 [GLY] 1A:1031 [C] c:104 [LYS] 1:1212 [C] ❌ 4Y4O_1A:1031 no longer at interface
13:14 [GLY] 1A:1032 [C] c:104 [LYS] 1:1213 [C] ❌ 4Y4O_1A:1032 no longer at interface
13:14 [GLY] 1A:1030 [A] c:104 [LYS] 1:1211 [A] ❌ 4Y4O_1A:1030 no longer at interface
13:18 [ASP] 1A:966 [G] c:108 [LYS] 1:1108 [G] ❌ 4Y4O_1A:966 no longer at interface
13:24 [LYS] 1A:975 [U] c:114 [GLN] 1:1158 [U] ❌ 4Y4O_1A:975 no longer at interface
13:25 [ALA] 1A:975 [U] c:115 [LEU] 1:1158 [U] ❌ 4Y4O_1A:975 no longer at interface
13:27 [GLY] 1A:975 [U] c:117 [ARG] 1:1158 [U] ❌ 4Y4O_13:27, 4Y4O_1A:975 no longer at interface
13:32 [GLN] 1A:1045 [U] c:122 [PHE] 1:1225 [U] ❌ 4Y4O_1A:1045 no longer at interface
13:41 [PRO] 1A:900 [G] c:132 [PRO] 1:1038 [U] ❌ 4Y4O_1A:900 no longer at interface
13:44 [ARG] 1A:900 [G] c:135 [ASN] 1:1038 [U] ❌ 4Y4O_13:44, 4Y4O_1A:900 no longer at interface
13:49 [LYS] 1A:897 [C] c:139 [ALA] 1:1035 [G] ❌ 6AZ3_c:139 no longer at interface
13:49 [LYS] 1A:898 [U] c:139 [ALA] 1:1036 [U] ❌ 6AZ3_c:139 no longer at interface
13:26 [LEU] 1A:974 [G] c:116 [LEU] 1:1157 [U] ❌ 4Y4O_13:26 no longer at interface
13:27 [GLY] 1A:976 [G] c:117 [ARG] 1:1159 [A] ❌ 4Y4O_13:27 no longer at interface
13:28 [LEU] 1A:976 [G] c:118 [LEU] 1:1159 [A] ❌ 4Y4O_13:28 no longer at interface
13:34 [GLU] 1A:976 [G] c:123 [ASN] 1:1159 [A] ❌ 4Y4O_13:34 no longer at interface
13:34 [GLU] 1A:1205 [U] c:123 [ASN] 1:1404 [U] ❌ 4Y4O_13:34 no longer at interface
13:39 [ASP] 1A:973 [G] c:128 [LYS] 1:1156 [A] ❌ 4Y4O_13:39 no longer at interface
13:39 [ASP] 1A:974 [G] c:128 [LYS] 1:1157 [U] ❌ 4Y4O_13:39 no longer at interface
13:44 [ARG] 1A:899 [G] c:135 [ASN] 1:1037 [A] ❌ 4Y4O_13:44 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 0.65 3.35 0.08 0.87 0.7 0.88 0.82 0.51 0.31 0.17 0.50


Other pairs involving 4Y4O_13_1A or 6AZ3_c_1

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_W_0 4Y4O_13_1A 0.76 0.9 2.49 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 6AZ3_c_1 0.55 0.75 1.77 0.17 Ribosomal protein L30p/L7e compare
1YHQ_W_0 4Y4O_13_1A 0.75 0.9 2.44 0.15 Ribosomal protein L30p/L7e compare
1YHQ_W_0 6AZ3_c_1 0.55 0.75 1.77 0.17 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6S0Z_X_A 0.79 0.97 1.8 0.38 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7OF0_Z_A 0.49 0.93 1.37 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7O7Y_BF_B5 0.58 0.89 2.87 0.04 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6AZ3_c_1 0.51 0.65 3.35 0.08 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 7RYG_Y_A 0.66 0.96 3.31 0.31 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7K00_y_a 0.76 0.96 1.81 0.29 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6AZ3_c_1 6S0Z_X_A 0.58 0.65 2.43 0.13 Ribosomal protein L30p/L7e compare
6AZ3_c_1 7O7Y_BF_B5 0.65 0.92 1.81 0.33 Ribosomal protein L30p/L7e Eukaryotic large subunit ribosomal RNA compare
6AZ3_c_1 7RYG_Y_A 0.57 0.63 2.5 0.19 Ribosomal protein L30p/L7e compare
6AZ3_c_1 7K00_y_a 0.70 0.64 2.52 0.23 Ribosomal protein L30p/L7e compare