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All interfaces > All interologs > Interface groups > group124 > 4Y4O_13_1A vs 6S0Z_X_A

Interface analysis


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Common contacts -

4Y4O_13
4Y4O_1A
6S0Z_X
6S0Z_A
Conserved?
13:13 [ILE] 1A:1014 [U] X:13 [ILE] A:1013 [U] ✔
13:13 [ILE] 1A:1015 [C] X:13 [ILE] A:1014 [U] ✔
13:13 [ILE] 1A:1034 [A] X:13 [ILE] A:1032 [A] ✔
13:13 [ILE] 1A:1035 [G] X:13 [ILE] A:1033 [G] ✔
13:10 [LYS] 1A:1033 [G] X:10 [ARG] A:1031 [C] ✔
13:10 [LYS] 1A:1034 [A] X:10 [ARG] A:1032 [A] ✔
13:11 [SER] 1A:1034 [A] X:11 [SER] A:1032 [A] ✔
13:11 [SER] 1A:1035 [G] X:11 [SER] A:1033 [G] ✔
13:31 [LEU] 1A:1034 [A] X:31 [THR] A:1032 [A] ✔
13:31 [LEU] 1A:1035 [G] X:31 [THR] A:1033 [G] ✔
13:31 [LEU] 1A:1203 [G] X:31 [THR] A:1201 [G] ✔
13:31 [LEU] 1A:1204 [C] X:31 [THR] A:1202 [C] ✔
13:24 [LYS] 1A:976 [G] X:24 [GLU] A:975 [U] ✔
13:24 [LYS] 1A:977 [G] X:24 [GLU] A:976 [U] ✔
13:24 [LYS] 1A:978 [A] X:24 [GLU] A:977 [A] ✔
13:18 [ASP] 1A:897 [C] X:18 [THR] A:895 [U] ✔
13:45 [GLY] 1A:898 [U] X:45 [GLY] A:896 [U] ✔
13:45 [GLY] 1A:899 [G] X:45 [GLY] A:897 [A] ✔
13:25 [ALA] 1A:896 [A] X:25 [ALA] A:894 [A] ✔
13:25 [ALA] 1A:897 [C] X:25 [ALA] A:895 [U] ✔
13:43 [ILE] 1A:898 [U] X:43 [ILE] A:896 [U] ✔
13:21 [ALA] 1A:896 [A] X:21 [LYS] A:894 [A] ✔
13:21 [ALA] 1A:897 [C] X:21 [LYS] A:895 [U] ✔
13:16 [PRO] 1A:1013 [G] X:16 [PRO] A:1012 [G] ✔
13:16 [PRO] 1A:1014 [U] X:16 [PRO] A:1013 [U] ✔
13:17 [LYS] 1A:1013 [G] X:17 [GLU] A:1012 [G] ✔
13:17 [LYS] 1A:1014 [U] X:17 [GLU] A:1013 [U] ✔
13:15 [TYR] 1A:1014 [U] X:15 [ARG] A:1013 [U] ✔
13:15 [TYR] 1A:1033 [G] X:15 [ARG] A:1031 [C] ✔
13:29 [ARG] 1A:1228 [G] X:29 [LYS] A:1222 [A] ✔
13:29 [ARG] 1A:1229 [G] X:29 [LYS] A:1223 [A] ✔
13:9 [VAL] 1A:1034 [A] X:9 [THR] A:1032 [A] ✔
13:46 [ASN] 1A:897 [C] X:46 [GLN] A:895 [U] ✔
13:46 [ASN] 1A:898 [U] X:46 [GLN] A:896 [U] ✔
13:42 [ALA] 1A:898 [U] X:42 [ALA] A:896 [U] ✔
13:42 [ALA] 1A:899 [G] X:42 [ALA] A:897 [A] ✔
13:42 [ALA] 1A:973 [G] X:42 [ALA] A:972 [A] ✔
13:32 [GLN] 1A:1204 [C] X:32 [ASN] A:1202 [C] ✔
13:20 [LYS] 1A:1014 [U] X:20 [ARG] A:1013 [U] ✔
13:20 [LYS] 1A:1015 [C] X:20 [ARG] A:1014 [U] ✔
13:41 [PRO] 1A:898 [U] X:41 [PRO] A:896 [U] ✔
13:41 [PRO] 1A:899 [G] X:41 [PRO] A:897 [A] ✔
13:30 [ARG] 1A:1204 [C] X:30 [LYS] A:1202 [C] ✔
13:30 [ARG] 1A:1229 [G] X:30 [LYS] A:1223 [A] ✔
13:12 [PRO] 1A:1035 [G] X:12 [VAL] A:1033 [G] ✔
13:22 [ALA] 1A:897 [C] X:22 [THR] A:895 [U] ✔
13:49 [LYS] 1A:897 [C] X:49 [LYS] A:895 [U] ✔
13:49 [LYS] 1A:898 [U] X:49 [LYS] A:896 [U] ✔
13:14 [GLY] 1A:1014 [U] X:14 [GLY] A:1013 [U] ✔
13:14 [GLY] 1A:1015 [C] X:14 [GLY] A:1014 [U] ✔
13:24 [LYS] 1A:896 [A] X:24 [GLU] A:894 [A] ❌ 6S0Z_X_A
13:24 [LYS] 1A:974 [G] X:24 [GLU] A:973 [A] ❌ 6S0Z_X_A
13:18 [ASP] 1A:898 [U] X:18 [THR] A:896 [U] ❌ 6S0Z_X_A
13:25 [ALA] 1A:973 [G] X:25 [ALA] A:972 [A] ❌ 6S0Z_X_A
13:25 [ALA] 1A:974 [G] X:25 [ALA] A:973 [A] ❌ 6S0Z_X_A
13:43 [ILE] 1A:973 [G] X:43 [ILE] A:972 [A] ❌ 6S0Z_X_A
13:40 [THR] 1A:973 [G] X:40 [ASN] A:972 [A] ❌ 6S0Z_X_A
13:15 [TYR] 1A:1015 [C] X:15 [ARG] A:1014 [U] ❌ 6S0Z_X_A
13:29 [ARG] 1A:976 [G] X:29 [LYS] A:975 [U] ❌ 6S0Z_X_A
13:29 [ARG] 1A:977 [G] X:29 [LYS] A:976 [U] ❌ 6S0Z_X_A
13:46 [ASN] 1A:973 [G] X:46 [GLN] A:972 [A] ❌ 6S0Z_X_A
13:30 [ARG] 1A:1228 [G] X:30 [LYS] A:1222 [A] ❌ 6S0Z_X_A
13:12 [PRO] 1A:1015 [C] X:12 [VAL] A:1014 [U] ❌ 6S0Z_X_A
13:11 [SER] 1A:1033 [G] X:11 [SER] A:1031 [C] ❌ 4Y4O_13_1A
13:15 [TYR] 1A:1013 [G] X:15 [ARG] A:1012 [G] ❌ 4Y4O_13_1A
13:22 [ALA] 1A:898 [U] X:22 [THR] A:896 [U] ❌ 4Y4O_13_1A
13:25 [ALA] 1A:976 [G] X:25 [ALA] A:975 [U] ❌ 4Y4O_13_1A
13:32 [GLN] 1A:1203 [G] X:32 [ASN] A:1201 [G] ❌ 4Y4O_13_1A
13:40 [THR] 1A:974 [G] X:40 [ASN] A:973 [A] ❌ 4Y4O_13_1A
13:42 [ALA] 1A:974 [G] X:42 [ALA] A:973 [A] ❌ 4Y4O_13_1A
13:43 [ILE] 1A:974 [G] X:43 [ILE] A:973 [A] ❌ 4Y4O_13_1A
13:46 [ASN] 1A:974 [G] X:46 [GLN] A:973 [A] ❌ 4Y4O_13_1A
13:24 [LYS] 1A:895 [G] X:24 [GLU] A:893 [G] ❌ 6S0Z_A:893 no longer at interface
13:42 [ALA] 1A:972 [A] X:42 [ALA] A:971 [U] ❌ 6S0Z_A:971 no longer at interface
13:30 [ARG] 1A:1205 [U] X:30 [LYS] A:1203 [U] ❌ 6S0Z_A:1203 no longer at interface
13:10 [LYS] 1A:1046 [A] X:10 [ARG] A:1044 [A] ❌ 4Y4O_1A:1046 no longer at interface
13:25 [ALA] 1A:975 [U] X:25 [ALA] A:974 [U] ❌ 4Y4O_1A:975 no longer at interface
13:26 [LEU] 1A:975 [U] X:26 [LEU] A:974 [U] ❌ 4Y4O_13:26, 4Y4O_1A:975 no longer at interface
13:27 [GLY] 1A:975 [U] X:27 [GLY] A:974 [U] ❌ 4Y4O_13:27, 4Y4O_1A:975 no longer at interface
13:30 [ARG] 1A:1230 [C] X:30 [LYS] A:1224 [U] ❌ 4Y4O_1A:1230 no longer at interface
13:37 [LEU] 1A:975 [U] X:37 [VAL] A:974 [U] ❌ 4Y4O_13:37, 4Y4O_1A:975 no longer at interface
13:38 [GLU] 1A:975 [U] X:38 [GLU] A:974 [U] ❌ 4Y4O_13:38, 4Y4O_1A:975 no longer at interface
13:43 [ILE] 1A:975 [U] X:43 [ILE] A:974 [U] ❌ 4Y4O_1A:975 no longer at interface
13:46 [ASN] 1A:975 [U] X:46 [GLN] A:974 [U] ❌ 4Y4O_1A:975 no longer at interface
13:26 [LEU] 1A:976 [G] X:26 [LEU] A:975 [U] ❌ 4Y4O_13:26 no longer at interface
13:27 [GLY] 1A:976 [G] X:27 [GLY] A:975 [U] ❌ 4Y4O_13:27 no longer at interface
13:38 [GLU] 1A:974 [G] X:38 [GLU] A:973 [A] ❌ 4Y4O_13:38 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA 0.97 1.8 0.38 0.93 0.97 1.0 0.86 0.79 0.68 0.26 0.41


Other pairs involving 4Y4O_13_1A or 6S0Z_X_A

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_W_0 6S0Z_X_A 0.68 0.9 1.63 0.27 Ribosomal protein L30p/L7e compare
1YHQ_W_0 4Y4O_13_1A 0.75 0.9 2.44 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 4Y4O_13_1A 0.76 0.9 2.49 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 6S0Z_X_A 0.69 0.9 1.68 0.27 Ribosomal protein L30p/L7e compare
6AZ3_c_1 6S0Z_X_A 0.58 0.65 2.43 0.13 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6S0Z_X_A 0.79 0.97 1.8 0.38 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7OF0_Z_A 0.49 0.93 1.37 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7O7Y_BF_B5 0.58 0.89 2.87 0.04 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6AZ3_c_1 0.51 0.65 3.35 0.08 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 7RYG_Y_A 0.66 0.96 3.31 0.31 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7K00_y_a 0.76 0.96 1.81 0.29 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6S0Z_X_A 7O7Y_BF_B5 0.72 0.89 2.16 0.17 Ribosomal protein L30p/L7e compare
6S0Z_X_A 7OF0_Z_A 0.62 0.93 2.4 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6S0Z_X_A 7K00_y_a 0.76 0.97 0.92 0.43 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6S0Z_X_A 7RYG_Y_A 0.68 0.98 2.14 0.27 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare