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All interfaces > All interologs > Interface groups > group124 > 4Y4O_13_1A vs 7O7Y_BF_B5

Interface analysis


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Common contacts -

4Y4O_13
4Y4O_1A
7O7Y_BF
7O7Y_B5
Conserved?
13:13 [ILE] 1A:1015 [C] BF:98 [ASN] B5:1817 [G] ✔
13:13 [ILE] 1A:1034 [A] BF:98 [ASN] B5:1835 [A] ✔
13:13 [ILE] 1A:1035 [G] BF:98 [ASN] B5:1836 [A] ✔
13:10 [LYS] 1A:1033 [G] BF:95 [ARG] B5:1834 [G] ✔
13:10 [LYS] 1A:1034 [A] BF:95 [ARG] B5:1835 [A] ✔
13:11 [SER] 1A:1034 [A] BF:96 [GLY] B5:1835 [A] ✔
13:11 [SER] 1A:1035 [G] BF:96 [GLY] B5:1836 [A] ✔
13:31 [LEU] 1A:1034 [A] BF:116 [ILE] B5:1835 [A] ✔
13:31 [LEU] 1A:1035 [G] BF:116 [ILE] B5:1836 [A] ✔
13:31 [LEU] 1A:1203 [G] BF:116 [ILE] B5:2010 [A] ✔
13:31 [LEU] 1A:1204 [C] BF:116 [ILE] B5:2011 [C] ✔
13:18 [ASP] 1A:897 [C] BF:103 [LYS] B5:1664 [U] ✔
13:18 [ASP] 1A:898 [U] BF:103 [LYS] B5:1665 [U] ✔
13:45 [GLY] 1A:898 [U] BF:131 [MET] B5:1665 [U] ✔
13:25 [ALA] 1A:897 [C] BF:110 [LEU] B5:1664 [U] ✔
13:25 [ALA] 1A:974 [G] BF:110 [LEU] B5:1778 [U] ✔
13:21 [ALA] 1A:896 [A] BF:106 [LYS] B5:1663 [G] ✔
13:21 [ALA] 1A:897 [C] BF:106 [LYS] B5:1664 [U] ✔
13:16 [PRO] 1A:1013 [G] BF:101 [SER] B5:1815 [U] ✔
13:16 [PRO] 1A:1014 [U] BF:101 [SER] B5:1816 [G] ✔
13:17 [LYS] 1A:1013 [G] BF:102 [PRO] B5:1815 [U] ✔
13:17 [LYS] 1A:1014 [U] BF:102 [PRO] B5:1816 [G] ✔
13:15 [TYR] 1A:1014 [U] BF:100 [VAL] B5:1816 [G] ✔
13:9 [VAL] 1A:1034 [A] BF:94 [ILE] B5:1835 [A] ✔
13:42 [ALA] 1A:898 [U] BF:128 [SER] B5:1665 [U] ✔
13:42 [ALA] 1A:973 [G] BF:128 [SER] B5:1777 [A] ✔
13:32 [GLN] 1A:1204 [C] BF:117 [PHE] B5:2011 [C] ✔
13:41 [PRO] 1A:898 [U] BF:127 [ALA] B5:1665 [U] ✔
13:41 [PRO] 1A:899 [G] BF:127 [ALA] B5:1666 [U] ✔
13:30 [ARG] 1A:1204 [C] BF:115 [GLN] B5:2011 [C] ✔
13:30 [ARG] 1A:1205 [U] BF:115 [GLN] B5:2012 [C] ✔
13:12 [PRO] 1A:1035 [G] BF:97 [ILE] B5:1836 [A] ✔
13:22 [ALA] 1A:897 [C] BF:107 [VAL] B5:1664 [U] ✔
13:49 [LYS] 1A:897 [C] BF:134 [ILE] B5:1664 [U] ✔
13:49 [LYS] 1A:898 [U] BF:134 [ILE] B5:1665 [U] ✔
13:14 [GLY] 1A:1014 [U] BF:99 [GLY] B5:1816 [G] ✔
13:14 [GLY] 1A:1015 [C] BF:99 [GLY] B5:1817 [G] ✔
13:13 [ILE] 1A:1014 [U] BF:98 [ASN] B5:1816 [G] ❌ 7O7Y_BF_B5
13:24 [LYS] 1A:895 [G] BF:109 [GLN] B5:1662 [A] ❌ 7O7Y_BF_B5
13:24 [LYS] 1A:896 [A] BF:109 [GLN] B5:1663 [G] ❌ 7O7Y_BF_B5
13:24 [LYS] 1A:974 [G] BF:109 [GLN] B5:1778 [U] ❌ 7O7Y_BF_B5
13:24 [LYS] 1A:976 [G] BF:109 [GLN] B5:1780 [C] ❌ 7O7Y_BF_B5
13:24 [LYS] 1A:978 [A] BF:109 [GLN] B5:1781 [G] ❌ 7O7Y_BF_B5
13:45 [GLY] 1A:899 [G] BF:131 [MET] B5:1666 [U] ❌ 7O7Y_BF_B5
13:25 [ALA] 1A:896 [A] BF:110 [LEU] B5:1663 [G] ❌ 7O7Y_BF_B5
13:25 [ALA] 1A:973 [G] BF:110 [LEU] B5:1777 [A] ❌ 7O7Y_BF_B5
13:15 [TYR] 1A:1015 [C] BF:100 [VAL] B5:1817 [G] ❌ 7O7Y_BF_B5
13:15 [TYR] 1A:1033 [G] BF:100 [VAL] B5:1834 [G] ❌ 7O7Y_BF_B5
13:42 [ALA] 1A:899 [G] BF:128 [SER] B5:1666 [U] ❌ 7O7Y_BF_B5
13:42 [ALA] 1A:972 [A] BF:128 [SER] B5:1776 [A] ❌ 7O7Y_BF_B5
13:30 [ARG] 1A:1228 [G] BF:115 [GLN] B5:2119 [A] ❌ 7O7Y_BF_B5
13:30 [ARG] 1A:1229 [G] BF:115 [GLN] B5:2120 [C] ❌ 7O7Y_BF_B5
13:12 [PRO] 1A:1015 [C] BF:97 [ILE] B5:1817 [G] ❌ 7O7Y_BF_B5
13:17 [LYS] 1A:896 [A] BF:102 [PRO] B5:1663 [G] ❌ 4Y4O_13_1A
13:18 [ASP] 1A:896 [A] BF:103 [LYS] B5:1663 [G] ❌ 4Y4O_13_1A
13:21 [ALA] 1A:895 [G] BF:106 [LYS] B5:1662 [A] ❌ 4Y4O_13_1A
13:25 [ALA] 1A:895 [G] BF:110 [LEU] B5:1662 [A] ❌ 4Y4O_13_1A
13:30 [ARG] 1A:1203 [G] BF:115 [GLN] B5:2010 [A] ❌ 4Y4O_13_1A
13:41 [PRO] 1A:973 [G] BF:127 [ALA] B5:1777 [A] ❌ 4Y4O_13_1A
13:41 [PRO] 1A:972 [A] BF:127 [ALA] B5:1776 [A] ❌ 4Y4O_13_1A
13:45 [GLY] 1A:974 [G] BF:131 [MET] B5:1778 [U] ❌ 4Y4O_13_1A
13:45 [GLY] 1A:973 [G] BF:131 [MET] B5:1777 [A] ❌ 4Y4O_13_1A
13:45 [GLY] 1A:897 [C] BF:131 [MET] B5:1664 [U] ❌ 4Y4O_13_1A
13:18 [ASP] 1A:966 [G] BF:103 [LYS] B5:1736 [G] ❌ 4Y4O_1A:966 no longer at interface
13:18 [ASP] 1A:965 [G] BF:103 [LYS] B5:1735 [U] ❌ 4Y4O_1A:965 no longer at interface
13:24 [LYS] 1A:975 [U] BF:109 [GLN] B5:1779 [G] ❌ 4Y4O_1A:975 no longer at interface
13:25 [ALA] 1A:975 [U] BF:110 [LEU] B5:1779 [G] ❌ 4Y4O_1A:975 no longer at interface
13:27 [GLY] 1A:975 [U] BF:112 [ARG] B5:1779 [G] ❌ 4Y4O_13:27, 4Y4O_1A:975 no longer at interface
13:32 [GLN] 1A:1045 [U] BF:117 [PHE] B5:1845 [U] ❌ 4Y4O_1A:1045 no longer at interface
13:40 [THR] 1A:973 [G] BF:124 [LEU] B5:1777 [A] ❌ 7O7Y_BF:124 no longer at interface
13:29 [ARG] 1A:976 [G] BF:114 [ARG] B5:1780 [C] ❌ 7O7Y_BF:114 no longer at interface
13:29 [ARG] 1A:1228 [G] BF:114 [ARG] B5:2119 [A] ❌ 7O7Y_BF:114 no longer at interface
13:29 [ARG] 1A:1229 [G] BF:114 [ARG] B5:2120 [C] ❌ 7O7Y_BF:114 no longer at interface
13:20 [LYS] 1A:1014 [U] BF:105 [ARG] B5:1816 [G] ❌ 7O7Y_BF:105 no longer at interface
13:20 [LYS] 1A:1015 [C] BF:105 [ARG] B5:1817 [G] ❌ 7O7Y_BF:105 no longer at interface
13:26 [LEU] 1A:974 [G] BF:111 [LEU] B5:1778 [U] ❌ 4Y4O_13:26 no longer at interface
13:27 [GLY] 1A:976 [G] BF:112 [ARG] B5:1780 [C] ❌ 4Y4O_13:27 no longer at interface
13:34 [GLU] 1A:1205 [U] BF:118 [ASN] B5:2012 [C] ❌ 4Y4O_13:34 no longer at interface
13:39 [ASP] 1A:973 [G] BF:123 [LYS] B5:1777 [A] ❌ 4Y4O_13:39 no longer at interface
13:39 [ASP] 1A:974 [G] BF:123 [LYS] B5:1778 [U] ❌ 4Y4O_13:39 no longer at interface
13:44 [ARG] 1A:898 [U] BF:130 [ASN] B5:1665 [U] ❌ 4Y4O_13:44 no longer at interface
13:44 [ARG] 1A:899 [G] BF:130 [ASN] B5:1666 [U] ❌ 4Y4O_13:44 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e 0.89 2.87 0.04 0.86 0.89 0.81 0.95 0.58 0.49 0.16 0.42


Other pairs involving 4Y4O_13_1A or 7O7Y_BF_B5

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_W_0 4Y4O_13_1A 0.75 0.9 2.44 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 4Y4O_13_1A 0.76 0.9 2.49 0.15 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6AZ3_c_1 0.51 0.65 3.35 0.08 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6S0Z_X_A 0.79 0.97 1.8 0.38 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7K00_y_a 0.76 0.96 1.81 0.29 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
1YHQ_W_0 7O7Y_BF_B5 0.64 0.94 1.51 0.22 Ribosomal protein L30p/L7e compare
1VQ8_W_0 7O7Y_BF_B5 0.65 0.94 1.79 0.21 Ribosomal protein L30p/L7e compare
6AZ3_c_1 7O7Y_BF_B5 0.65 0.92 1.81 0.33 Ribosomal protein L30p/L7e Eukaryotic large subunit ribosomal RNA compare
4Y4O_13_1A 7O7Y_BF_B5 0.58 0.89 2.87 0.04 Ribosomal protein L30p/L7e compare
6S0Z_X_A 7O7Y_BF_B5 0.72 0.89 2.16 0.17 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 7OF0_Z_A 0.49 0.93 1.37 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7RYG_Y_A 0.66 0.96 3.31 0.31 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare