RNAprotDB

All interfaces > All interologs > Interface groups > group126 > 3CC2_C_0

Interface analysis

mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show as licorice
show Accessibility
Rim - Core

Contacts -

3CC2_C
3CC2_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
C:27 [ARG] 0:656 [G] 3.63 0:749 [C] 85.28
C:27 [ARG] 0:657 [G] 2.31 0:748 [C] 85.28
C:29 [ASP] 0:656 [G] 4.15 0:749 [C] 80.92
C:30 [LEU] 0:656 [G] 3.32 0:749 [C] 66.89
C:30 [LEU] 0:657 [G] 4.06 0:748 [C] 66.89
C:33 [LYS] 0:656 [G] 4.51 0:749 [C] 76.35
C:33 [LYS] 0:750 [A] 3.69 0:655 [U] 76.35
C:33 [LYS] 0:751 [U] 4.08 0:654 [A] 76.35
C:36 [ARG] 0:1348 [A] 3.04 0:1306 [U] sugar:SC 14.38
C:36 [ARG] 0:1349 [G] 3.69 0:1305 [C] 14.38
C:37 [ALA] 0:675 [U] 4.86 74.26
C:37 [ALA] 0:676 [C] 4.02 0:670 [G] 74.26
C:38 [ALA] 0:675 [U] 2.62 sugar:BB 17.67
C:38 [ALA] 0:676 [C] 3.4 0:670 [G] 17.67
C:39 [GLN] 0:675 [U] 4.61 55.85
C:39 [GLN] 0:1307 [A] 3.17 0:1347 [U] sugar:SC 55.85
C:40 [ALA] 0:449 [A] 4.04 82.09
C:41 [ASN] 0:674 [A] 4.13 69.93
C:41 [ASN] 0:675 [U] 3.32 69.93
C:41 [ASN] 0:676 [C] 2.88 0:670 [G] 69.93
C:42 [ARG] 0:449 [A] 4.59 40.35
C:42 [ARG] 0:674 [A] 4.09 40.35
C:42 [ARG] 0:675 [U] 2.87 sugar:SC 40.35
C:43 [LYS] 0:449 [A] 3.2 70.27
C:43 [LYS] 0:1306 [U] 3.83 0:1348 [A] 70.27
C:44 [GLN] 0:35 [U] 4.99 0:447 [A] 85.6
C:44 [GLN] 0:36 [C] 4.12 0:446 [G] 85.6
C:44 [GLN] 0:447 [A] 2.5 0:35 [U] base:SC, sugar:SC 85.6
C:44 [GLN] 0:448 [G] 2.94 0:34 [C] 85.6
C:44 [GLN] 0:449 [A] 2.77 85.6
C:44 [GLN] 0:674 [A] 3.17 base/AA stacks 85.6
C:45 [ASP] 0:35 [U] 3.01 0:447 [A] sugar:BB 74.05
C:45 [ASP] 0:36 [C] 3.7 0:446 [G] 74.05
C:46 [TYR] 0:35 [U] 3.52 0:447 [A] 72.07
C:46 [TYR] 0:448 [G] 4.33 0:34 [C] 72.07
C:46 [TYR] 0:450 [C] 3.11 0:33 [G] 72.07
C:46 [TYR] 0:1351 [G] 3.95 0:1303 [C] 72.07
C:46 [TYR] 0:1352 [A] 2.97 72.07
C:47 [GLY] 0:34 [C] 2.61 0:448 [G] sugar:BB 77.87
C:47 [GLY] 0:35 [U] 3.16 0:447 [A] sugar:BB 77.87
C:48 [SER] 0:34 [C] 3.41 0:448 [G] 56.22
C:48 [SER] 0:35 [U] 4.52 0:447 [A] 56.22
C:48 [SER] 0:456 [G] 4.63 56.22
C:48 [SER] 0:457 [U] 3.44 56.22
C:48 [SER] 0:1352 [A] 3.34 56.22
C:49 [ASP] 0:34 [C] 3.55 0:448 [G] 50.71
C:49 [ASP] 0:35 [U] 3.63 0:447 [A] 50.71
C:49 [ASP] 0:457 [U] 2.79 50.71
C:50 [GLU] 0:35 [U] 4.75 0:447 [A] 52.14
C:50 [GLU] 0:894 [A] 4.95 52.14
C:51 [TYR] 0:458 [G] 3.84 16.31
C:51 [TYR] 0:892 [G] 4.53 0:769 [C] 16.31
C:51 [TYR] 0:894 [A] 4.26 16.31
C:52 [ALA] 0:457 [U] 3.34 97.49
C:52 [ALA] 0:458 [G] 3.39 97.49
C:53 [GLY] 0:457 [U] 4.79 94.67
C:53 [GLY] 0:458 [G] 2.9 94.67
C:54 [LEU] 0:458 [G] 4.67 51.03
C:54 [LEU] 0:894 [A] 3.86 51.03
C:55 [ARG] 0:457 [U] 3.01 55.16
C:55 [ARG] 0:458 [G] 2.84 55.16
C:55 [ARG] 0:475 [G] 4.08 0:466 [A] 55.16
C:56 [THR] 0:474 [C] 4.94 0:467 [G] 68.45
C:56 [THR] 0:475 [G] 2.97 0:466 [A] 68.45
C:56 [THR] 0:891 [G] 4.32 0:770 [C] 68.45
C:57 [PRO] 0:474 [C] 3.59 0:467 [G] 79.96
C:57 [PRO] 0:475 [G] 3.33 0:466 [A] 79.96
C:57 [PRO] 0:890 [C] 3.24 0:771 [G] 79.96
C:57 [PRO] 0:891 [G] 3.66 0:770 [C] 79.96
C:60 [SER] 0:765 [G] 3.94 0:899 [C] 72.83
C:60 [SER] 0:766 [A] 2.78 0:896 [C] 72.83
C:60 [SER] 0:767 [A] 4.71 0:895 [A] 72.83
C:61 [PHE] 0:767 [A] 4.46 0:895 [A] 28.08
C:62 [GLY] 0:766 [A] 3.73 0:896 [C] 78.27
C:62 [GLY] 0:767 [A] 4.08 0:895 [A] 78.27
C:62 [GLY] 0:1359 [U] 4.35 78.27
C:63 [SER] 0:767 [A] 4.5 0:895 [A] 70.01
C:63 [SER] 0:1359 [U] 3.41 base:SC 70.01
C:63 [SER] 0:2100 [A] 4.74 70.01
C:63 [SER] 0:2101 [A] 3.25 70.01
C:63 [SER] 0:2479 [A] 3.61 0:2107 [U] 70.01
C:64 [GLY] 0:1359 [U] 4.38 86.38
C:64 [GLY] 0:2100 [A] 3.23 86.38
C:64 [GLY] 0:2101 [A] 3.01 86.38
C:65 [ARG] 0:2100 [A] 4.05 61.68
C:65 [ARG] 0:2101 [A] 3.61 61.68
C:66 [GLY] 0:1359 [U] 3.06 92.08
C:66 [GLY] 0:2100 [A] 3.61 92.08
C:66 [GLY] 0:2101 [A] 2.93 92.08
C:67 [GLN] 0:1359 [U] 2.9 53.53
C:67 [GLN] 0:2101 [A] 4.03 53.53
C:68 [ALA] 0:1359 [U] 3.81 85.77
C:68 [ALA] 0:1360 [C] 3.4 0:641 [G] 85.77
C:68 [ALA] 0:1361 [C] 3.96 0:640 [G] 85.77
C:69 [HIS] 0:764 [C] 4.07 0:900 [U] 94.59
C:69 [HIS] 0:765 [G] 2.79 0:899 [C] sugar:SC 94.59
C:69 [HIS] 0:766 [A] 3.84 0:896 [C] 94.59
C:69 [HIS] 0:1359 [U] 2.93 base:SC 94.59
C:69 [HIS] 0:2101 [A] 4.29 94.59
C:69 [HIS] 0:2479 [A] 3.99 0:2107 [U] 94.59
C:70 [VAL] 0:764 [C] 4.9 0:900 [U] 65.02
C:70 [VAL] 0:765 [G] 4.96 0:899 [C] 65.02
C:70 [VAL] 0:1360 [C] 3.53 0:641 [G] 65.02
C:70 [VAL] 0:1361 [C] 4.0 0:640 [G] 65.02
C:71 [PRO] 0:764 [C] 4.45 0:900 [U] 78.06
C:71 [PRO] 0:765 [G] 3.24 0:899 [C] 78.06
C:72 [LYS] 0:1361 [C] 4.34 0:640 [G] 89.21
C:72 [LYS] 0:1362 [U] 4.47 0:639 [A] 89.21
C:73 [GLN] 0:474 [C] 2.88 0:467 [G] sugar:SC 62.84
C:73 [GLN] 0:475 [G] 3.37 0:466 [A] 62.84
C:73 [GLN] 0:890 [C] 4.16 0:771 [G] 62.84
C:74 [ASP] 0:467 [G] 4.12 0:474 [C] 69.73
C:74 [ASP] 0:474 [C] 2.94 0:467 [G] sugar:SC 69.73
C:74 [ASP] 0:475 [G] 3.26 0:466 [A] sugar:SC 69.73
C:75 [GLY] 0:1362 [U] 4.41 0:639 [A] 77.82
C:76 [ARG] 0:476 [A] 3.99 0:465 [U] 57.18
C:76 [ARG] 0:1362 [U] 3.14 0:639 [A] 57.18
C:76 [ARG] 0:1363 [G] 2.61 0:638 [C] 57.18
C:77 [ALA] 0:1361 [C] 2.91 0:640 [G] 84.79
C:77 [ALA] 0:1362 [U] 3.12 0:639 [A] 84.79
C:78 [ARG] 0:475 [G] 4.19 0:466 [A] 72.26
C:78 [ARG] 0:476 [A] 2.95 0:465 [U] 72.26
C:79 [ARG] 0:894 [A] 4.48 58.74
C:80 [VAL] 0:764 [C] 3.21 0:900 [U] 76.43
C:80 [VAL] 0:765 [G] 3.73 0:899 [C] 76.43
C:81 [PRO] 0:641 [G] 5.0 0:1360 [C] 89.46
C:81 [PRO] 0:642 [G] 3.34 0:1358 [A] 89.46
C:81 [PRO] 0:763 [C] 3.98 0:901 [G] 89.46
C:81 [PRO] 0:764 [C] 3.7 0:900 [U] 89.46
C:82 [GLN] 0:641 [G] 2.85 0:1360 [C] base:BB 40.24
C:82 [GLN] 0:642 [G] 3.49 0:1358 [A] 40.24
C:82 [GLN] 0:763 [C] 4.48 0:901 [G] 40.24
C:82 [GLN] 0:764 [C] 3.25 0:900 [U] sugar:SC 40.24
C:82 [GLN] 0:1358 [A] 3.39 0:642 [G] base/AA stacks 40.24
C:82 [GLN] 0:1360 [C] 3.3 0:641 [G] sugar:SC 40.24
C:82 [GLN] 0:1361 [C] 3.21 0:640 [G] 40.24
C:83 [ALA] 0:455 [A] 4.83 0:460 [A] 68.51
C:83 [ALA] 0:1361 [C] 3.39 0:640 [G] 68.51
C:84 [VAL] 0:454 [U] 3.17 70.29
C:84 [VAL] 0:455 [A] 3.89 0:460 [A] 70.29
C:84 [VAL] 0:640 [G] 3.77 0:1361 [C] 70.29
C:84 [VAL] 0:1361 [C] 2.97 0:640 [G] sugar:BB 70.29
C:84 [VAL] 0:1362 [U] 3.32 0:639 [A] 70.29
C:85 [LYS] 0:454 [U] 4.51 77.25
C:85 [LYS] 0:455 [A] 2.91 0:460 [A] 77.25
C:85 [LYS] 0:458 [G] 3.06 77.25
C:85 [LYS] 0:459 [A] 3.18 77.25
C:85 [LYS] 0:476 [A] 4.08 0:465 [U] 77.25
C:85 [LYS] 0:477 [A] 2.67 0:463 [A] 77.25
C:86 [GLY] 0:455 [A] 4.65 0:460 [A] 99.0
C:86 [GLY] 0:456 [G] 4.65 99.0
C:87 [ARG] 0:763 [C] 3.64 0:901 [G] 93.49
C:87 [ARG] 0:764 [C] 2.77 0:900 [U] 93.49
C:87 [ARG] 0:894 [A] 2.82 base/AA stacks 93.49
C:88 [SER] 0:456 [G] 4.07 60.33
C:88 [SER] 0:1352 [A] 3.28 base:SC 60.33
C:89 [ALA] 0:643 [A] 3.48 0:1355 [A] 84.8
C:89 [ALA] 0:763 [C] 4.51 0:901 [G] 84.8
C:89 [ALA] 0:894 [A] 4.72 84.8
C:90 [HIS] 0:643 [A] 3.84 0:1355 [A] 90.95
C:90 [HIS] 0:644 [G] 3.92 0:903 [U] 90.95
C:90 [HIS] 0:645 [U] 3.35 0:761 [A] base/AA stacks 90.95
C:90 [HIS] 0:762 [C] 2.96 0:902 [G] sugar:SC 90.95
C:90 [HIS] 0:763 [C] 3.64 0:901 [G] 90.95
C:90 [HIS] 0:1352 [A] 3.57 90.95
C:91 [PRO] 0:645 [U] 4.38 0:761 [A] 90.13
C:91 [PRO] 0:1352 [A] 3.7 90.13
C:92 [PRO] 0:450 [C] 4.34 0:33 [G] 93.77
C:92 [PRO] 0:1352 [A] 3.32 93.77
C:93 [LYS] 0:645 [U] 2.85 0:761 [A] base:SC, sugar:SC 67.79
C:93 [LYS] 0:646 [G] 3.36 0:759 [C] sugar:SC 67.79
C:93 [LYS] 0:760 [G] 4.2 67.79
C:93 [LYS] 0:761 [A] 4.41 0:645 [U] 67.79
C:94 [THR] 0:35 [U] 3.21 0:447 [A] 57.35
C:94 [THR] 0:36 [C] 4.0 0:446 [G] 57.35
C:95 [GLU] 0:646 [G] 3.71 0:759 [C] 46.61
C:95 [GLU] 0:647 [U] 3.39 0:758 [A] 46.61
C:96 [LYS] 0:646 [G] 3.37 0:759 [C] 78.75
C:96 [LYS] 0:647 [U] 3.52 0:758 [A] 78.75
C:96 [LYS] 0:1350 [U] 4.72 0:1304 [U] 78.75
C:96 [LYS] 0:1351 [G] 2.33 0:1303 [C] 78.75
C:97 [ASP] 0:646 [G] 4.26 0:759 [C] 57.07
C:97 [ASP] 0:647 [U] 2.9 0:758 [A] 57.07
C:99 [SER] 0:751 [U] 4.42 0:654 [A] 49.35
C:100 [LEU] 0:750 [A] 4.93 0:655 [U] 41.83
C:100 [LEU] 0:751 [U] 3.75 0:654 [A] 41.83
C:100 [LEU] 0:752 [G] 3.95 0:653 [U] 41.83
C:101 [ASP] 0:750 [A] 3.16 0:655 [U] 71.14
C:101 [ASP] 0:751 [U] 2.9 0:654 [A] 71.14
C:102 [LEU] 0:664 [U] 3.94 0:682 [A] 75.04
C:102 [LEU] 0:750 [A] 4.1 0:655 [U] 75.04
C:103 [ASN] 0:656 [G] 3.72 0:749 [C] 95.97
C:103 [ASN] 0:657 [G] 3.73 0:748 [C] 95.97
C:103 [ASN] 0:662 [U] 4.99 0:684 [G] 95.97
C:103 [ASN] 0:663 [C] 3.58 0:683 [G] 95.97
C:103 [ASN] 0:664 [U] 3.59 0:682 [A] 95.97
C:103 [ASN] 0:749 [C] 2.68 0:656 [G] base:SC, sugar:SC 95.97
C:103 [ASN] 0:750 [A] 3.14 0:655 [U] 95.97
C:104 [ASP] 0:664 [U] 3.13 0:682 [A] 71.69
C:104 [ASP] 0:678 [G] 4.94 0:668 [C] 71.69
C:104 [ASP] 0:680 [G] 4.31 0:666 [A] 71.69
C:105 [LYS] 0:657 [G] 3.67 0:748 [C] 91.69
C:105 [LYS] 0:658 [C] 3.41 0:747 [G] sugar:SC 91.69
C:105 [LYS] 0:662 [U] 3.51 0:684 [G] 91.69
C:105 [LYS] 0:663 [C] 2.89 0:683 [G] 91.69
C:105 [LYS] 0:664 [U] 4.95 0:682 [A] 91.69
C:106 [GLU] 0:656 [G] 3.14 0:749 [C] base:SC 86.72
C:106 [GLU] 0:657 [G] 3.27 0:748 [C] 86.72
C:107 [ARG] 0:676 [C] 4.91 0:670 [G] 68.15
C:107 [ARG] 0:677 [C] 3.03 0:669 [G] 68.15
C:107 [ARG] 0:678 [G] 2.64 0:668 [C] 68.15
C:108 [GLN] 0:678 [G] 2.85 0:668 [C] 41.51
C:108 [GLN] 0:679 [G] 4.56 0:667 [C] 41.51
C:109 [LEU] 0:657 [G] 4.01 0:748 [C] 51.36
C:109 [LEU] 0:658 [C] 4.23 0:747 [G] 51.36
C:111 [VAL] 0:677 [C] 4.44 0:669 [G] 56.77
C:127 [ARG] 0:1308 [A] 2.98 0:1346 [U] 85.57
C:127 [ARG] 0:1309 [U] 2.86 0:1345 [A] 85.57
C:127 [ARG] 0:1310 [U] 4.92 0:1344 [G] 85.57
C:128 [GLY] 0:1309 [U] 4.01 0:1345 [A] 83.95
C:128 [GLY] 0:1310 [U] 3.49 0:1344 [G] 83.95
C:129 [HIS] 0:1309 [U] 4.97 0:1345 [A] 90.59
C:148 [VAL] 0:328 [U] 3.51 31.64
C:149 [LYS] 0:327 [A] 2.54 86.03
C:149 [LYS] 0:328 [U] 2.91 86.03
C:150 [THR] 0:327 [A] 3.21 92.28
C:150 [THR] 0:328 [U] 2.86 92.28
C:150 [THR] 0:329 [A] 4.06 0:346 [U] 92.28
C:151 [GLN] 0:325 [U] 4.93 0:340 [A] 70.16
C:151 [GLN] 0:326 [G] 2.65 0:330 [C] 70.16
C:151 [GLN] 0:327 [A] 3.28 base:SC 70.16
C:151 [GLN] 0:328 [U] 4.84 70.16
C:154 [VAL] 0:327 [A] 4.01 2.74
C:168 [ARG] 0:1309 [U] 3.69 0:1345 [A] 74.67
C:168 [ARG] 0:1310 [U] 2.71 0:1344 [G] 74.67
C:170 [ASP] 0:330 [C] 3.07 0:326 [G] base:SC 34.18
C:170 [ASP] 0:340 [A] 4.85 0:325 [U] 34.18
C:172 [THR] 0:339 [A] 4.14 0:308 [U] 52.13
C:173 [LYS] 0:1309 [U] 4.04 0:1345 [A] 63.52
C:173 [LYS] 0:1310 [U] 3.28 0:1344 [G] base:SC 63.52
C:173 [LYS] 0:1311 [G] 3.31 0:1343 [C] 63.52
C:173 [LYS] 0:1343 [C] 4.15 0:1311 [G] 63.52
C:173 [LYS] 0:1344 [G] 2.83 0:1310 [U] base:SC 63.52
C:173 [LYS] 0:1345 [A] 3.94 0:1309 [U] 63.52
C:174 [ILE] 0:338 [C] 3.09 69.78
C:174 [ILE] 0:339 [A] 4.02 0:308 [U] 69.78
C:174 [ILE] 0:1312 [G] 4.66 0:1342 [C] 69.78
C:174 [ILE] 0:1342 [C] 3.42 0:1312 [G] 69.78
C:174 [ILE] 0:1343 [C] 2.78 0:1311 [G] base:BB 69.78
C:175 [LYS] 0:1305 [C] 4.88 0:1349 [G] 83.22
C:175 [LYS] 0:1306 [U] 2.69 0:1348 [A] 83.22
C:175 [LYS] 0:1307 [A] 2.86 0:1347 [U] 83.22
C:175 [LYS] 0:1343 [C] 3.83 0:1311 [G] 83.22
C:176 [ALA] 0:1306 [U] 4.44 0:1348 [A] 76.63
C:176 [ALA] 0:1343 [C] 3.39 0:1311 [G] 76.63
C:176 [ALA] 0:1344 [G] 3.83 0:1310 [U] 76.63
C:177 [GLY] 0:29 [C] 4.21 0:479 [G] 91.31
C:177 [GLY] 0:1305 [C] 3.45 0:1349 [G] 91.31
C:177 [GLY] 0:1343 [C] 2.93 0:1311 [G] 91.31
C:177 [GLY] 0:1344 [G] 4.66 0:1310 [U] 91.31
C:178 [GLN] 0:29 [C] 3.8 0:479 [G] 68.99
C:178 [GLN] 0:30 [U] 4.46 0:453 [A] 68.99
C:178 [GLN] 0:452 [G] 3.23 sugar:SC 68.99
C:178 [GLN] 0:1305 [C] 2.87 0:1349 [G] 68.99
C:179 [GLY] 0:1305 [C] 3.67 0:1349 [G] 83.85
C:179 [GLY] 0:1306 [U] 3.19 0:1348 [A] 83.85
C:180 [SER] 0:29 [C] 4.54 0:479 [G] 76.33
C:180 [SER] 0:30 [U] 4.82 0:453 [A] 76.33
C:181 [ALA] 0:30 [U] 3.37 0:453 [A] 50.92
C:181 [ALA] 0:452 [G] 3.96 50.92
C:182 [ARG] 0:448 [G] 4.52 0:34 [C] 97.56
C:182 [ARG] 0:449 [A] 4.49 97.56
C:182 [ARG] 0:450 [C] 2.82 0:33 [G] base/AA stacks 97.56
C:182 [ARG] 0:451 [C] 2.72 0:32 [G] base/AA stacks 97.56
C:182 [ARG] 0:452 [G] 2.8 base:SC, base:SC 97.56
C:182 [ARG] 0:1305 [C] 4.98 0:1349 [G] 97.56
C:183 [GLY] 0:332 [G] 4.3 0:344 [C] 73.45
C:184 [ARG] 0:448 [G] 2.97 0:34 [C] sugar:SC 95.1
C:184 [ARG] 0:449 [A] 3.66 95.1
C:184 [ARG] 0:450 [C] 2.35 0:33 [G] 95.1
C:184 [ARG] 0:1305 [C] 3.1 0:1349 [G] 95.1
C:184 [ARG] 0:1306 [U] 3.01 0:1348 [A] 95.1
C:185 [LYS] 0:333 [G] 3.69 0:343 [C] 48.2
C:185 [LYS] 0:334 [G] 4.98 0:342 [C] 48.2
C:185 [LYS] 0:338 [C] 4.71 48.2
C:185 [LYS] 0:339 [A] 4.21 0:308 [U] 48.2
C:186 [TYR] 0:332 [G] 3.86 0:344 [C] 53.32
C:186 [TYR] 0:333 [G] 3.49 0:343 [C] 53.32
C:186 [TYR] 0:338 [C] 4.64 53.32
C:186 [TYR] 0:339 [A] 2.76 0:308 [U] 53.32
C:187 [ARG] 0:1307 [A] 4.94 0:1347 [U] 67.42
C:187 [ARG] 0:1308 [A] 2.86 0:1346 [U] 67.42
C:187 [ARG] 0:1309 [U] 3.23 0:1345 [A] 67.42
C:187 [ARG] 0:1310 [U] 3.88 0:1344 [G] base:SC 67.42
C:188 [ARG] 0:330 [C] 3.72 0:326 [G] 10.21
C:188 [ARG] 0:331 [A] 4.87 0:345 [G] 10.21
C:188 [ARG] 0:1308 [A] 4.3 0:1346 [U] 10.21
C:188 [ARG] 0:1309 [U] 4.2 0:1345 [A] 10.21
C:189 [PRO] 0:1309 [U] 3.25 0:1345 [A] 48.29
C:189 [PRO] 0:1310 [U] 4.16 0:1344 [G] 48.29
C:190 [ALA] 0:1308 [A] 4.25 0:1346 [U] 67.98
C:190 [ALA] 0:1309 [U] 3.16 0:1345 [A] 67.98
C:200 [PRO] 0:672 [G] 3.8 7.87
C:202 [THR] 0:328 [U] 3.01 57.46
C:202 [THR] 0:329 [A] 4.22 0:346 [U] 57.46
C:203 [ALA] 0:328 [U] 4.32 83.64
C:205 [ARG] 0:328 [U] 3.84 62.08
C:205 [ARG] 0:329 [A] 2.67 0:346 [U] 62.08
C:205 [ARG] 0:347 [A] 2.72 0:304 [G] sugar:SC 62.08
C:205 [ARG] 0:348 [C] 4.35 0:303 [C] 62.08
C:206 [ASN] 0:326 [G] 3.78 0:330 [C] 94.67
C:206 [ASN] 0:327 [A] 2.73 base:SC 94.67
C:206 [ASN] 0:329 [A] 2.99 0:346 [U] 94.67
C:206 [ASN] 0:330 [C] 2.89 0:326 [G] base:SC, sugar:BB 94.67
C:206 [ASN] 0:331 [A] 4.68 0:345 [G] 94.67
C:207 [LEU] 0:327 [A] 4.04 72.16
C:207 [LEU] 0:330 [C] 4.16 0:326 [G] 72.16
C:208 [ALA] 0:327 [A] 4.93 57.68
C:208 [ALA] 0:330 [C] 4.13 0:326 [G] 57.68
C:209 [GLY] 0:330 [C] 4.9 0:326 [G] 79.62
C:212 [VAL] 0:672 [G] 4.36 66.44
C:213 [ALA] 0:672 [G] 3.19 46.78
C:214 [THR] 0:672 [G] 3.08 base:BB 1.18
C:216 [SER] 0:677 [C] 2.94 0:669 [G] sugar:BB 36.39
C:217 [GLU] 0:670 [G] 3.11 0:676 [C] base:SC 31.15
C:217 [GLU] 0:671 [A] 2.82 sugar:SC 31.15
C:217 [GLU] 0:672 [G] 3.34 base/AA stacks 31.15
C:217 [GLU] 0:676 [C] 3.76 0:670 [G] sugar:BB 31.15
C:217 [GLU] 0:677 [C] 3.47 0:669 [G] 31.15
C:218 [VAL] 0:672 [G] 3.47 73.65
C:218 [VAL] 0:677 [C] 4.4 0:669 [G] 73.65
C:219 [ASN] 0:672 [G] 3.78 80.93
C:219 [ASN] 0:676 [C] 2.56 0:670 [G] sugar:SC 80.93
C:219 [ASN] 0:677 [C] 4.13 0:669 [G] 80.93
C:221 [GLU] 0:675 [U] 4.41 22.62
C:222 [ASP] 0:672 [G] 2.78 base:SC, base:SC 59.93
C:225 [PRO] 0:1308 [A] 3.54 0:1346 [U] 74.58
C:226 [GLY] 0:1307 [A] 3.49 0:1347 [U] 81.01
C:226 [GLY] 0:1308 [A] 3.27 0:1346 [U] 81.01
C:228 [ALA] 0:1308 [A] 3.75 0:1346 [U] 0.87
C:246 [ARG] 0:677 [C] 3.41 0:669 [G] 71.65
C:246 [ARG] 0:678 [G] 3.54 0:668 [C] 71.65

logo_download Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group126 3CC2_C_0 C: 50s ribosomal protein l4p, Haloarcula marismortui (natural) 0: 23s ribosomal RNA, Haloarcula marismortui (natural) P12735 Ribosomal protein L4 Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_C_0 3CC2_C_0 0.99 1.0 0.17 0.98 Ribosomal protein L4 Archaeal large subunit ribosomal RNA compare
1YHQ_C_0 3CC2_C_0 0.99 1.0 0.13 0.99 Ribosomal protein L4 Archaeal large subunit ribosomal RNA compare
3CC2_C_0 4Y4O_1F_1A 0.66 0.92 2.07 0.24 Ribosomal protein L4 compare
3CC2_C_0 6AZ3_C_1,7 0.72 0.69 1.44 0.3 compare
3CC2_C_0 6S0Z_E_A 0.69 0.92 2.18 0.2 Ribosomal protein L4 compare
3CC2_C_0 7K00_e_a 0.65 0.91 2.38 0.2 Ribosomal protein L4 compare
3CC2_C_0 7O7Y_BC_B5,B8 0.73 0.94 1.35 0.3 Ribosomal protein L4 compare
3CC2_C_0 7OF0_F_A 0.58 0.93 2.51 0.21 Ribosomal protein L4 compare
3CC2_C_0 7RYG_E_A 0.63 0.92 2.47 0.22 Ribosomal protein L4 compare