RNAprotDB

All interfaces > All interologs > Interface groups > group126 > 4Y4O_1F_1A vs 6S0Z_E_A

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

4Y4O_1F
4Y4O_1A
6S0Z_E
6S0Z_A
Conserved?
1F:134 [GLY] 1A:345 [G] E:134 [PRO] A:364 [A] ✔
1F:169 [ASN] 1A:344 [A] E:169 [ASN] A:363 [A] ✔
1F:169 [ASN] 1A:346 [A] E:169 [ASN] A:365 [A] ✔
1F:169 [ASN] 1A:347 [G] E:169 [ASN] A:366 [G] ✔
1F:169 [ASN] 1A:348 [A] E:169 [ASN] A:367 [A] ✔
1F:73 [ALA] 1A:1301 [U] E:73 [ALA] A:1293 [U] ✔
1F:73 [ALA] 1A:1302 [G] E:73 [ALA] A:1294 [G] ✔
1F:73 [ALA] 1A:1303 [C] E:73 [ALA] A:1295 [C] ✔
1F:39 [TRP] 1A:641 [G] E:39 [LEU] A:661 [U] ✔
1F:140 [LEU] 1A:344 [A] E:140 [LYS] A:363 [A] ✔
1F:41 [LEU] 1A:469 [A] E:41 [ARG] A:489 [A] ✔
1F:41 [LEU] 1A:1247 [C] E:41 [ARG] A:1241 [A] ✔
1F:84 [VAL] 1A:474 [U] E:84 [ARG] A:494 [U] ✔
1F:84 [VAL] 1A:475 [A] E:84 [ARG] A:495 [A] ✔
1F:84 [VAL] 1A:1303 [C] E:84 [ARG] A:1295 [C] ✔
1F:84 [VAL] 1A:1304 [C] E:84 [ARG] A:1296 [C] ✔
1F:42 [ALA] 1A:469 [A] E:42 [ALA] A:489 [A] ✔
1F:59 [TYR] 1A:495 [G] E:59 [GLY] A:515 [G] ✔
1F:74 [ARG] 1A:720 [C] E:74 [ARG] A:718 [C] ✔
1F:74 [ARG] 1A:721 [G] E:74 [ARG] A:719 [G] ✔
1F:74 [ARG] 1A:854 [U] E:74 [ARG] A:852 [U] ✔
1F:74 [ARG] 1A:1301 [U] E:74 [ARG] A:1293 [U] ✔
1F:74 [ARG] 1A:2082 [A] E:74 [ARG] A:2087 [A] ✔
1F:74 [ARG] 1A:2456 [G] E:74 [ARG] A:2471 [G] ✔
1F:74 [ARG] 1A:2457 [G] E:74 [ARG] A:2472 [G] ✔
1F:82 [ILE] 1A:607 [C] E:82 [GLN] A:627 [C] ✔
1F:82 [ILE] 1A:608 [G] E:82 [GLN] A:628 [G] ✔
1F:82 [ILE] 1A:720 [C] E:82 [GLN] A:718 [C] ✔
1F:82 [ILE] 1A:1300 [A] E:82 [GLN] A:1292 [A] ✔
1F:82 [ILE] 1A:1302 [G] E:82 [GLN] A:1294 [G] ✔
1F:82 [ILE] 1A:1303 [C] E:82 [GLN] A:1295 [C] ✔
1F:80 [ALA] 1A:720 [C] E:80 [ALA] A:718 [C] ✔
1F:80 [ALA] 1A:721 [G] E:80 [ALA] A:719 [G] ✔
1F:53 [THR] 1A:716 [G] E:53 [ASN] A:714 [G] ✔
1F:53 [THR] 1A:848 [G] E:53 [ASN] A:846 [G] ✔
1F:97 [TYR] 1A:1292 [A] E:97 [TYR] A:1284 [A] ✔
1F:97 [TYR] 1A:1293 [A] E:97 [TYR] A:1285 [A] ✔
1F:44 [ARG] 1A:469 [A] E:44 [LEU] A:489 [A] ✔
1F:44 [ARG] 1A:639 [G] E:44 [LEU] A:659 [A] ✔
1F:88 [VAL] 1A:476 [G] E:88 [ILE] A:496 [G] ✔
1F:88 [VAL] 1A:1294 [G] E:88 [ILE] A:1286 [G] ✔
1F:168 [ARG] 1A:345 [G] E:168 [ARG] A:364 [A] ✔
1F:168 [ARG] 1A:346 [A] E:168 [ARG] A:365 [A] ✔
1F:168 [ARG] 1A:364 [A] E:168 [ARG] A:383 [A] ✔
1F:104 [LYS] 1A:623 [G] E:104 [LYS] A:643 [G] ✔
1F:104 [LYS] 1A:624 [C] E:104 [LYS] A:644 [C] ✔
1F:104 [LYS] 1A:628 [C] E:104 [LYS] A:648 [G] ✔
1F:104 [LYS] 1A:629 [U] E:104 [LYS] A:649 [U] ✔
1F:60 [SER] 1A:495 [G] E:60 [GLY] A:515 [G] ✔
1F:85 [GLY] 1A:475 [A] E:85 [GLY] A:495 [A] ✔
1F:136 [THR] 1A:344 [A] E:136 [THR] A:363 [A] ✔
1F:136 [THR] 1A:345 [G] E:136 [THR] A:364 [A] ✔
1F:136 [THR] 1A:346 [A] E:136 [THR] A:365 [A] ✔
1F:83 [PHE] 1A:1303 [C] E:83 [TRP] A:1295 [C] ✔
1F:83 [PHE] 1A:1304 [C] E:83 [TRP] A:1296 [C] ✔
1F:188 [ARG] 1A:1248 [G] E:188 [ASN] A:1242 [A] ✔
1F:170 [LEU] 1A:344 [A] E:170 [ILE] A:363 [A] ✔
1F:170 [LEU] 1A:347 [G] E:170 [ILE] A:366 [G] ✔
1F:71 [GLY] 1A:1301 [U] E:71 [GLY] A:1293 [U] ✔
1F:71 [GLY] 1A:2081 [A] E:71 [GLY] A:2086 [A] ✔
1F:71 [GLY] 1A:2082 [A] E:71 [GLY] A:2087 [A] ✔
1F:75 [HIS] 1A:720 [C] E:75 [GLN] A:718 [C] ✔
1F:75 [HIS] 1A:721 [G] E:75 [GLN] A:719 [G] ✔
1F:75 [HIS] 1A:722 [A] E:75 [GLN] A:720 [A] ✔
1F:75 [HIS] 1A:1302 [G] E:75 [GLN] A:1294 [G] ✔
1F:75 [HIS] 1A:1303 [C] E:75 [GLN] A:1295 [C] ✔
1F:48 [THR] 1A:37 [C] E:48 [THR] A:37 [C] ✔
1F:48 [THR] 1A:38 [A] E:48 [THR] A:38 [A] ✔
1F:48 [THR] 1A:39 [C] E:48 [THR] A:39 [C] ✔
1F:48 [THR] 1A:468 [G] E:48 [THR] A:488 [G] ✔
1F:48 [THR] 1A:470 [C] E:48 [THR] A:490 [C] ✔
1F:166 [ALA] 1A:345 [G] E:166 [SER] A:364 [A] ✔
1F:99 [TYR] 1A:706 [C] E:99 [TYR] A:704 [U] ✔
1F:99 [TYR] 1A:707 [G] E:99 [TYR] A:705 [U] ✔
1F:91 [GLY] 1A:1294 [G] E:91 [GLY] A:1286 [G] ✔
1F:67 [GLN] 1A:721 [G] E:67 [GLN] A:719 [G] ✔
1F:67 [GLN] 1A:722 [A] E:67 [GLN] A:720 [A] ✔
1F:67 [GLN] 1A:1301 [U] E:67 [GLN] A:1293 [U] ✔
1F:67 [GLN] 1A:2455 [C] E:67 [GLN] A:2470 [C] ✔
1F:67 [GLN] 1A:2456 [G] E:67 [GLN] A:2471 [G] ✔
1F:55 [GLY] 1A:848 [G] E:55 [SER] A:846 [G] ✔
1F:45 [ARG] 1A:469 [A] E:45 [ARG] A:489 [A] ✔
1F:45 [ARG] 1A:470 [C] E:45 [ARG] A:490 [C] ✔
1F:45 [ARG] 1A:1292 [A] E:45 [ARG] A:1284 [A] ✔
1F:54 [ARG] 1A:720 [C] E:54 [ARG] A:718 [C] ✔
1F:54 [ARG] 1A:721 [G] E:54 [ARG] A:719 [G] ✔
1F:54 [ARG] 1A:848 [G] E:54 [ARG] A:846 [G] ✔
1F:58 [ALA] 1A:478 [G] E:58 [SER] A:498 [G] ✔
1F:58 [ALA] 1A:484 [G] E:58 [SER] A:504 [G] ✔
1F:58 [ALA] 1A:495 [G] E:58 [SER] A:515 [G] ✔
1F:68 [LYS] 1A:2082 [A] E:68 [LYS] A:2087 [A] ✔
1F:68 [LYS] 1A:2083 [G] E:68 [LYS] A:2088 [G] ✔
1F:68 [LYS] 1A:2455 [C] E:68 [LYS] A:2470 [C] ✔
1F:68 [LYS] 1A:2456 [G] E:68 [LYS] A:2471 [G] ✔
1F:101 [LEU] 1A:630 [U] E:101 [MET] A:650 [U] ✔
1F:101 [LEU] 1A:706 [C] E:101 [MET] A:704 [U] ✔
1F:182 [ASN] 1A:640 [A] E:182 [ASN] A:660 [A] ✔
1F:89 [VAL] 1A:609 [A] E:89 [VAL] A:629 [A] ✔
1F:89 [VAL] 1A:718 [C] E:89 [VAL] A:716 [C] ✔
1F:89 [VAL] 1A:719 [C] E:89 [VAL] A:717 [C] ✔
1F:70 [THR] 1A:2081 [A] E:70 [THR] A:2086 [A] ✔
1F:70 [THR] 1A:2082 [A] E:70 [THR] A:2087 [A] ✔
1F:29 [ASN] 1A:622 [G] E:29 [ASN] A:642 [U] ✔
1F:29 [ASN] 1A:623 [G] E:29 [ASN] A:643 [G] ✔
1F:81 [PRO] 1A:607 [C] E:81 [PRO] A:627 [C] ✔
1F:81 [PRO] 1A:608 [G] E:81 [PRO] A:628 [G] ✔
1F:81 [PRO] 1A:719 [C] E:81 [PRO] A:717 [C] ✔
1F:81 [PRO] 1A:720 [C] E:81 [PRO] A:718 [C] ✔
1F:56 [GLU] 1A:478 [G] E:56 [ALA] A:498 [G] ✔
1F:77 [ASP] 1A:721 [G] E:77 [THR] A:719 [G] ✔
1F:50 [SER] 1A:37 [C] E:50 [ALA] A:37 [C] ✔
1F:50 [SER] 1A:38 [A] E:50 [ALA] A:38 [A] ✔
1F:50 [SER] 1A:470 [C] E:50 [ALA] A:490 [C] ✔
1F:50 [SER] 1A:477 [C] E:50 [ALA] A:497 [U] ✔
1F:50 [SER] 1A:1294 [G] E:50 [ALA] A:1286 [G] ✔
1F:34 [TRP] 1A:1290 [G] E:34 [PHE] A:1282 [A] ✔
1F:34 [TRP] 1A:1291 [G] E:34 [PHE] A:1283 [G] ✔
1F:40 [GLN] 1A:640 [A] E:40 [GLN] A:660 [A] ✔
1F:61 [GLY] 1A:845 [G] E:61 [GLY] A:843 [G] ✔
1F:32 [LEU] 1A:622 [G] E:32 [VAL] A:642 [U] ✔
1F:32 [LEU] 1A:623 [G] E:32 [VAL] A:643 [G] ✔
1F:100 [THR] 1A:630 [U] E:100 [LYS] A:650 [U] ✔
1F:100 [THR] 1A:631 [A] E:100 [LYS] A:651 [A] ✔
1F:100 [THR] 1A:706 [C] E:100 [LYS] A:704 [U] ✔
1F:65 [TRP] 1A:1303 [C] E:65 [TRP] A:1295 [C] ✔
1F:105 [VAL] 1A:622 [G] E:105 [MET] A:642 [U] ✔
1F:105 [VAL] 1A:623 [G] E:105 [MET] A:643 [G] ✔
1F:38 [ARG] 1A:1291 [G] E:38 [ASN] A:1283 [G] ✔
1F:38 [ARG] 1A:1292 [A] E:38 [ASN] A:1284 [A] ✔
1F:165 [ARG] 1A:345 [G] E:165 [LEU] A:364 [A] ✔
1F:165 [ARG] 1A:346 [A] E:165 [LEU] A:365 [A] ✔
1F:57 [VAL] 1A:478 [G] E:57 [VAL] A:498 [G] ✔
1F:62 [ARG] 1A:494 [G] E:62 [ARG] A:514 [G] ✔
1F:62 [ARG] 1A:843 [C] E:62 [ARG] A:841 [C] ✔
1F:62 [ARG] 1A:844 [C] E:62 [ARG] A:842 [U] ✔
1F:62 [ARG] 1A:845 [G] E:62 [ARG] A:843 [G] ✔
1F:95 [ARG] 1A:612 [C] E:95 [ARG] A:632 [U] ✔
1F:95 [ARG] 1A:613 [A] E:95 [ARG] A:633 [A] ✔
1F:95 [ARG] 1A:1292 [A] E:95 [ARG] A:1284 [A] ✔
1F:95 [ARG] 1A:1293 [A] E:95 [ARG] A:1285 [A] ✔
1F:92 [PRO] 1A:1294 [G] E:92 [PRO] A:1286 [G] ✔
1F:135 [LYS] 1A:344 [A] E:135 [LYS] A:363 [A] ✔
1F:135 [LYS] 1A:345 [G] E:135 [LYS] A:364 [A] ✔
1F:106 [ARG] 1A:630 [U] E:106 [ARG] A:650 [U] ✔
1F:106 [ARG] 1A:642 [G] E:106 [ARG] A:662 [G] ✔
1F:171 [PRO] 1A:347 [G] E:171 [PRO] A:366 [G] ✔
1F:47 [GLY] 1A:469 [A] E:47 [GLY] A:489 [A] ✔
1F:49 [ALA] 1A:38 [A] E:49 [HIS] A:38 [A] ✔
1F:49 [ALA] 1A:468 [G] E:49 [HIS] A:488 [G] ✔
1F:49 [ALA] 1A:470 [C] E:49 [HIS] A:490 [C] ✔
1F:63 [LYS] 1A:721 [G] E:63 [LYS] A:719 [G] ✔
1F:63 [LYS] 1A:722 [A] E:63 [LYS] A:720 [A] ✔
1F:63 [LYS] 1A:723 [A] E:63 [LYS] A:721 [A] ✔
1F:180 [GLY] 1A:640 [A] E:180 [GLY] A:660 [A] ✔
1F:94 [PRO] 1A:38 [A] E:94 [PRO] A:38 [A] ✔
1F:94 [PRO] 1A:39 [C] E:94 [PRO] A:39 [C] ✔
1F:137 [LYS] 1A:344 [A] E:137 [LYS] A:363 [A] ✔
1F:90 [PHE] 1A:610 [C] E:90 [PHE] A:630 [G] ✔
1F:90 [PHE] 1A:611 [U] E:90 [PHE] A:631 [U] ✔
1F:90 [PHE] 1A:716 [G] E:90 [PHE] A:714 [G] ✔
1F:90 [PHE] 1A:717 [A] E:90 [PHE] A:715 [A] ✔
1F:90 [PHE] 1A:718 [C] E:90 [PHE] A:716 [C] ✔
1F:90 [PHE] 1A:719 [C] E:90 [PHE] A:717 [C] ✔
1F:90 [PHE] 1A:1294 [G] E:90 [PHE] A:1286 [G] ✔
1F:103 [LYS] 1A:630 [U] E:103 [LYS] A:650 [U] ✔
1F:103 [LYS] 1A:643 [C] E:103 [LYS] A:663 [U] ✔
1F:103 [LYS] 1A:644 [G] E:103 [LYS] A:664 [G] ✔
1F:103 [LYS] 1A:645 [G] E:103 [LYS] A:665 [G] ✔
1F:102 [PRO] 1A:629 [U] E:102 [PRO] A:649 [U] ✔
1F:102 [PRO] 1A:630 [U] E:102 [PRO] A:650 [U] ✔
1F:102 [PRO] 1A:705 [C] E:102 [PRO] A:703 [A] ✔
1F:102 [PRO] 1A:706 [C] E:102 [PRO] A:704 [U] ✔
1F:35 [GLU] 1A:706 [C] E:35 [GLU] A:704 [U] ✔
1F:35 [GLU] 1A:707 [G] E:35 [GLU] A:705 [U] ✔
1F:108 [LYS] 1A:623 [G] E:108 [LEU] A:643 [G] ✔
1F:78 [ILE] 1A:495 [G] E:78 [ILE] A:515 [G] ✔
1F:51 [THR] 1A:476 [G] E:51 [VAL] A:496 [G] ✔
1F:51 [THR] 1A:477 [C] E:51 [VAL] A:497 [U] ✔
1F:51 [THR] 1A:1294 [G] E:51 [VAL] A:1286 [G] ✔
1F:179 [GLU] 1A:640 [A] E:179 [GLN] A:660 [A] ✔
1F:179 [GLU] 1A:641 [G] E:179 [GLN] A:661 [U] ✔
1F:76 [GLY] 1A:721 [G] E:76 [GLY] A:719 [G] ✔
1F:76 [GLY] 1A:722 [A] E:76 [GLY] A:720 [A] ✔
1F:46 [ARG] 1A:38 [A] E:46 [GLN] A:38 [A] ✔
1F:46 [ARG] 1A:467 [U] E:46 [GLN] A:487 [U] ✔
1F:46 [ARG] 1A:468 [G] E:46 [GLN] A:488 [G] ✔
1F:46 [ARG] 1A:469 [A] E:46 [GLN] A:489 [A] ✔
1F:31 [HIS] 1A:622 [G] E:31 [SER] A:642 [U] ✔
1F:107 [LYS] 1A:642 [G] E:107 [ARG] A:662 [G] ✔
1F:52 [LYS] 1A:37 [C] E:52 [LYS] A:37 [C] ✔
1F:52 [LYS] 1A:38 [A] E:52 [LYS] A:38 [A] ✔
1F:52 [LYS] 1A:477 [C] E:52 [LYS] A:497 [U] ✔
1F:52 [LYS] 1A:478 [G] E:52 [LYS] A:498 [G] ✔
1F:86 [GLY] 1A:475 [A] E:86 [GLY] A:495 [A] ✔
1F:72 [ARG] 1A:1301 [U] E:72 [ARG] A:1293 [U] ✔
1F:72 [ARG] 1A:2082 [A] E:72 [ARG] A:2087 [A] ✔
1F:39 [TRP] 1A:642 [G] E:39 [LEU] A:662 [G] ❌ 6S0Z_E_A
1F:84 [VAL] 1A:607 [C] E:84 [ARG] A:627 [C] ❌ 6S0Z_E_A
1F:59 [TYR] 1A:478 [G] E:59 [GLY] A:498 [G] ❌ 6S0Z_E_A
1F:59 [TYR] 1A:496 [A] E:59 [GLY] A:516 [A] ❌ 6S0Z_E_A
1F:59 [TYR] 1A:845 [G] E:59 [GLY] A:843 [G] ❌ 6S0Z_E_A
1F:97 [TYR] 1A:470 [C] E:97 [TYR] A:490 [C] ❌ 6S0Z_E_A
1F:44 [ARG] 1A:1247 [C] E:44 [LEU] A:1241 [A] ❌ 6S0Z_E_A
1F:43 [LYS] 1A:641 [G] E:43 [SER] A:661 [U] ❌ 6S0Z_E_A
1F:60 [SER] 1A:494 [G] E:60 [GLY] A:514 [G] ❌ 6S0Z_E_A
1F:60 [SER] 1A:843 [C] E:60 [GLY] A:841 [C] ❌ 6S0Z_E_A
1F:60 [SER] 1A:844 [C] E:60 [GLY] A:842 [U] ❌ 6S0Z_E_A
1F:60 [SER] 1A:845 [G] E:60 [GLY] A:843 [G] ❌ 6S0Z_E_A
1F:85 [GLY] 1A:474 [U] E:85 [GLY] A:494 [U] ❌ 6S0Z_E_A
1F:85 [GLY] 1A:478 [G] E:85 [GLY] A:498 [G] ❌ 6S0Z_E_A
1F:83 [PHE] 1A:607 [C] E:83 [TRP] A:627 [C] ❌ 6S0Z_E_A
1F:67 [GLN] 1A:723 [A] E:67 [GLN] A:721 [A] ❌ 6S0Z_E_A
1F:67 [GLN] 1A:2082 [A] E:67 [GLN] A:2087 [A] ❌ 6S0Z_E_A
1F:45 [ARG] 1A:639 [G] E:45 [ARG] A:659 [A] ❌ 6S0Z_E_A
1F:58 [ALA] 1A:477 [C] E:58 [SER] A:497 [U] ❌ 6S0Z_E_A
1F:68 [LYS] 1A:2081 [A] E:68 [LYS] A:2086 [A] ❌ 6S0Z_E_A
1F:182 [ASN] 1A:641 [G] E:182 [ASN] A:661 [U] ❌ 6S0Z_E_A
1F:50 [SER] 1A:476 [G] E:50 [ALA] A:496 [G] ❌ 6S0Z_E_A
1F:34 [TRP] 1A:707 [G] E:34 [PHE] A:705 [U] ❌ 6S0Z_E_A
1F:40 [GLN] 1A:641 [G] E:40 [GLN] A:661 [U] ❌ 6S0Z_E_A
1F:61 [GLY] 1A:844 [C] E:61 [GLY] A:842 [U] ❌ 6S0Z_E_A
1F:181 [LEU] 1A:641 [G] E:181 [LEU] A:661 [U] ❌ 6S0Z_E_A
1F:100 [THR] 1A:705 [C] E:100 [LYS] A:703 [A] ❌ 6S0Z_E_A
1F:38 [ARG] 1A:469 [A] E:38 [ASN] A:489 [A] ❌ 6S0Z_E_A
1F:38 [ARG] 1A:707 [G] E:38 [ASN] A:705 [U] ❌ 6S0Z_E_A
1F:135 [LYS] 1A:343 [C] E:135 [LYS] A:362 [C] ❌ 6S0Z_E_A
1F:171 [PRO] 1A:344 [A] E:171 [PRO] A:363 [A] ❌ 6S0Z_E_A
1F:47 [GLY] 1A:38 [A] E:47 [GLY] A:38 [A] ❌ 6S0Z_E_A
1F:47 [GLY] 1A:470 [C] E:47 [GLY] A:490 [C] ❌ 6S0Z_E_A
1F:180 [GLY] 1A:641 [G] E:180 [GLY] A:661 [U] ❌ 6S0Z_E_A
1F:137 [LYS] 1A:345 [G] E:137 [LYS] A:364 [A] ❌ 6S0Z_E_A
1F:102 [PRO] 1A:622 [G] E:102 [PRO] A:642 [U] ❌ 6S0Z_E_A
1F:35 [GLU] 1A:622 [G] E:35 [GLU] A:642 [U] ❌ 6S0Z_E_A
1F:108 [LYS] 1A:624 [C] E:108 [LEU] A:644 [C] ❌ 6S0Z_E_A
1F:51 [THR] 1A:37 [C] E:51 [VAL] A:37 [C] ❌ 6S0Z_E_A
1F:46 [ARG] 1A:39 [C] E:46 [GLN] A:39 [C] ❌ 6S0Z_E_A
1F:46 [ARG] 1A:639 [G] E:46 [GLN] A:659 [A] ❌ 6S0Z_E_A
1F:86 [GLY] 1A:476 [G] E:86 [GLY] A:496 [G] ❌ 6S0Z_E_A
1F:72 [ARG] 1A:1302 [G] E:72 [ARG] A:1294 [G] ❌ 6S0Z_E_A
1F:72 [ARG] 1A:1303 [C] E:72 [ARG] A:1295 [C] ❌ 6S0Z_E_A
1F:72 [ARG] 1A:1304 [C] E:72 [ARG] A:1296 [C] ❌ 6S0Z_E_A
1F:100 [THR] 1A:707 [G] E:100 [LYS] A:705 [U] ❌ 4Y4O_1F_1A
1F:103 [LYS] 1A:642 [G] E:103 [LYS] A:662 [G] ❌ 4Y4O_1F_1A
1F:105 [VAL] 1A:706 [C] E:105 [MET] A:704 [U] ❌ 4Y4O_1F_1A
1F:105 [VAL] 1A:705 [C] E:105 [MET] A:703 [A] ❌ 4Y4O_1F_1A
1F:106 [ARG] 1A:641 [G] E:106 [ARG] A:661 [U] ❌ 4Y4O_1F_1A
1F:137 [LYS] 1A:343 [C] E:137 [LYS] A:362 [C] ❌ 4Y4O_1F_1A
1F:168 [ARG] 1A:348 [A] E:168 [ARG] A:367 [A] ❌ 4Y4O_1F_1A
1F:179 [GLU] 1A:642 [G] E:179 [GLN] A:662 [G] ❌ 4Y4O_1F_1A
1F:181 [LEU] 1A:640 [A] E:181 [LEU] A:660 [A] ❌ 4Y4O_1F_1A
1F:39 [TRP] 1A:640 [A] E:39 [LEU] A:660 [A] ❌ 4Y4O_1F_1A
1F:40 [GLN] 1A:639 [G] E:40 [GLN] A:659 [A] ❌ 4Y4O_1F_1A
1F:41 [LEU] 1A:1291 [G] E:41 [ARG] A:1283 [G] ❌ 4Y4O_1F_1A
1F:41 [LEU] 1A:1290 [G] E:41 [ARG] A:1282 [A] ❌ 4Y4O_1F_1A
1F:43 [LYS] 1A:639 [G] E:43 [SER] A:659 [A] ❌ 4Y4O_1F_1A
1F:43 [LYS] 1A:640 [A] E:43 [SER] A:660 [A] ❌ 4Y4O_1F_1A
1F:46 [ARG] 1A:638 [U] E:46 [GLN] A:658 [A] ❌ 4Y4O_1F_1A
1F:46 [ARG] 1A:470 [C] E:46 [GLN] A:490 [C] ❌ 4Y4O_1F_1A
1F:58 [ALA] 1A:496 [A] E:58 [SER] A:516 [A] ❌ 4Y4O_1F_1A
1F:68 [LYS] 1A:1301 [U] E:68 [LYS] A:1293 [U] ❌ 4Y4O_1F_1A
1F:82 [ILE] 1A:719 [C] E:82 [GLN] A:717 [C] ❌ 4Y4O_1F_1A
1F:83 [PHE] 1A:1302 [G] E:83 [TRP] A:1294 [G] ❌ 4Y4O_1F_1A
1F:84 [VAL] 1A:496 [A] E:84 [ARG] A:516 [A] ❌ 4Y4O_1F_1A
1F:88 [VAL] 1A:475 [A] E:88 [ILE] A:495 [A] ❌ 4Y4O_1F_1A
1F:89 [VAL] 1A:848 [G] E:89 [VAL] A:846 [G] ❌ 4Y4O_1F_1A
1F:90 [PHE] 1A:609 [A] E:90 [PHE] A:629 [A] ❌ 4Y4O_1F_1A
1F:91 [GLY] 1A:611 [U] E:91 [GLY] A:631 [U] ❌ 4Y4O_1F_1A
1F:66 [PRO] 1A:837 [C] E:66 [LYS] A:835 [U] ❌ 6S0Z_E:66, 6S0Z_A:835 no longer at interface
1F:84 [VAL] 1A:606 [G] E:84 [ARG] A:626 [G] ❌ 6S0Z_A:626 no longer at interface
1F:69 [HIS] 1A:2084 [A] E:69 [GLY] A:2089 [A] ❌ 6S0Z_E:69, 6S0Z_A:2089 no longer at interface
1F:68 [LYS] 1A:2084 [A] E:68 [LYS] A:2089 [A] ❌ 6S0Z_A:2089 no longer at interface
1F:38 [ARG] 1A:708 [C] E:38 [ASN] A:706 [U] ❌ 6S0Z_A:706 no longer at interface
1F:35 [GLU] 1A:621 [G] E:35 [GLU] A:641 [A] ❌ 6S0Z_A:641 no longer at interface
1F:46 [ARG] 1A:466 [G] E:46 [GLN] A:486 [G] ❌ 6S0Z_A:486 no longer at interface
1F:31 [HIS] 1A:621 [G] E:31 [SER] A:641 [A] ❌ 6S0Z_A:641 no longer at interface
1F:137 [LYS] 1A:342 [C] E:137 [LYS] A:361 [U] ❌ 4Y4O_1A:342 no longer at interface
1F:152 [GLU] 1A:1249 [A] E:150 [LYS] A:1243 [G] ❌ 4Y4O_1F:152, 4Y4O_1A:1249 no longer at interface
1F:153 [SER] 1A:1249 [A] E:151 [LYS] A:1243 [G] ❌ 4Y4O_1F:153, 4Y4O_1A:1249 no longer at interface
1F:188 [ARG] 1A:1249 [A] E:188 [ASN] A:1243 [G] ❌ 4Y4O_1A:1249 no longer at interface
1F:41 [LEU] 1A:1246 [C] E:41 [ARG] A:1240 [U] ❌ 4Y4O_1A:1246 no longer at interface
1F:62 [ARG] 1A:493 [G] E:62 [ARG] A:513 [G] ❌ 4Y4O_1A:493 no longer at interface
1F:84 [VAL] 1A:498 [A] E:84 [ARG] A:518 [A] ❌ 4Y4O_1A:498 no longer at interface
1F:84 [VAL] 1A:497 [A] E:84 [ARG] A:517 [A] ❌ 4Y4O_1A:497 no longer at interface
1F:176 [LEU] 1A:640 [A] E:176 [THR] A:660 [A] ❌ 6S0Z_E:176 no longer at interface
1F:69 [HIS] 1A:2081 [A] E:69 [GLY] A:2086 [A] ❌ 6S0Z_E:69 no longer at interface
1F:69 [HIS] 1A:2082 [A] E:69 [GLY] A:2087 [A] ❌ 6S0Z_E:69 no longer at interface
1F:69 [HIS] 1A:2455 [C] E:69 [GLY] A:2470 [C] ❌ 6S0Z_E:69 no longer at interface
1F:185 [ASP] 1A:640 [A] E:185 [ASP] A:660 [A] ❌ 6S0Z_E:185 no longer at interface
1F:184 [TYR] 1A:1247 [C] E:184 [LEU] A:1241 [A] ❌ 6S0Z_E:184 no longer at interface
1F:184 [TYR] 1A:1248 [G] E:184 [LEU] A:1242 [A] ❌ 6S0Z_E:184 no longer at interface
1F:177 [ALA] 1A:640 [A] E:177 [THR] A:660 [A] ❌ 6S0Z_E:177 no longer at interface
1F:205 [ARG] 1A:641 [G] E:205 [VAL] A:661 [U] ❌ 6S0Z_E:205 no longer at interface
1F:205 [ARG] 1A:642 [G] E:205 [VAL] A:662 [G] ❌ 6S0Z_E:205 no longer at interface
1F:153 [SER] 1A:1248 [G] E:151 [LYS] A:1242 [A] ❌ 4Y4O_1F:153 no longer at interface
1F:79 [GLY] 1A:496 [A] E:79 [ARG] A:516 [A] ❌ 4Y4O_1F:79 no longer at interface
1F:79 [GLY] 1A:478 [G] E:79 [ARG] A:498 [G] ❌ 4Y4O_1F:79 no longer at interface
1F:79 [GLY] 1A:495 [G] E:79 [ARG] A:515 [G] ❌ 4Y4O_1F:79 no longer at interface
1F:93 [LYS] 1A:612 [C] E:93 [THR] A:632 [U] ❌ 4Y4O_1F:93 no longer at interface
1F:96 [ASP] 1A:613 [A] E:96 [SER] A:633 [A] ❌ 4Y4O_1F:96 no longer at interface
1F:98 [SER] 1A:640 [A] E:98 [ALA] A:660 [A] ❌ 4Y4O_1F:98 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L4 Bacterial large subunit ribosomal RNA 0.97 1.43 0.53 0.9 0.97 0.93 0.93 0.78 0.73 0.41 0.32


Other pairs involving 4Y4O_1F_1A or 6S0Z_E_A

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_E_A 7O7Y_BC_B5,B8 0.67 0.9 2.36 0.24 Ribosomal protein L4 compare
6S0Z_E_A 7K00_e_a 0.81 0.98 1.41 0.49 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
6S0Z_E_A 7RYG_E_A 0.85 0.98 1.0 0.53 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
6S0Z_E_A 7OF0_F_A 0.86 0.94 1.45 0.44 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 7O7Y_BC_B5,B8 0.58 0.9 2.36 0.2 Ribosomal protein L4 compare
4Y4O_1F_1A 6AZ3_C_1,7 0.58 0.63 2.26 0.16 compare
4Y4O_1F_1A 7RYG_E_A 0.74 0.96 1.8 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 7OF0_F_A 0.80 0.94 1.15 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 7K00_e_a 0.77 0.96 1.16 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 6S0Z_E_A 0.78 0.97 1.43 0.53 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
1VQ8_C_0 6S0Z_E_A 0.68 0.92 2.2 0.2 Ribosomal protein L4 compare
1VQ8_C_0 4Y4O_1F_1A 0.65 0.92 2.06 0.24 Ribosomal protein L4 compare
1YHQ_C_0 6S0Z_E_A 0.68 0.92 2.18 0.2 Ribosomal protein L4 compare
1YHQ_C_0 4Y4O_1F_1A 0.65 0.92 2.09 0.24 Ribosomal protein L4 compare
6AZ3_C_1,7 6S0Z_E_A 0.60 0.63 2.39 0.22 compare
3CC2_C_0 6S0Z_E_A 0.69 0.92 2.18 0.2 Ribosomal protein L4 compare
3CC2_C_0 4Y4O_1F_1A 0.66 0.92 2.07 0.24 Ribosomal protein L4 compare