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All interfaces > All interologs > Interface groups > group126 > 6AZ3_C_1,7

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Licorice
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RNA

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Licorice
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Rim - Core

Contacts -

6AZ3_C
6AZ3_1,7
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
C:32 [ARG] 1:705 [C] 3.2 1:840 [G] 93.53
C:32 [ARG] 1:706 [G] 2.93 1:839 [U] 93.53
C:34 [ASP] 1:705 [C] 3.67 1:840 [G] 93.4
C:35 [ILE] 1:705 [C] 3.69 1:840 [G] 71.5
C:35 [ILE] 1:706 [G] 3.74 1:839 [U] 71.5
C:37 [LYS] 1:1517 [U] 3.26 1:1473 [A] 46.07
C:37 [LYS] 1:1518 [C] 2.99 1:1472 [G] 46.07
C:38 [PHE] 1:704 [G] 3.39 1:841 [U] 42.31
C:38 [PHE] 1:841 [U] 3.31 1:704 [G] 42.31
C:38 [PHE] 1:842 [G] 3.2 1:703 [C] 42.31
C:40 [HIS] 1:1474 [G] 3.36 1:1516 [C] sugar:SC 78.01
C:41 [THR] 1:378 [A] 4.67 47.82
C:41 [THR] 1:1517 [U] 4.67 1:1473 [A] 47.82
C:41 [THR] 1:1518 [C] 3.31 1:1472 [G] 47.82
C:41 [THR] 1:1519 [U] 4.26 1:1471 [G] 47.82
C:42 [ASN] 1:842 [G] 3.97 1:703 [C] 66.28
C:43 [MET] 1:730 [G] 4.27 1:721 [U] 54.33
C:43 [MET] 1:731 [U] 3.61 1:720 [A] 54.33
C:43 [MET] 1:732 [A] 3.88 1:719 [U] 54.33
C:44 [ALA] 1:378 [A] 3.16 base:BB 58.27
C:45 [LYS] 1:378 [A] 3.9 72.33
C:45 [LYS] 1:843 [C] 4.21 1:702 [A] 72.33
C:45 [LYS] 1:1518 [C] 4.05 1:1472 [G] 72.33
C:45 [LYS] 1:1519 [U] 2.82 1:1471 [G] 72.33
C:46 [ASN] 1:729 [A] 3.58 sugar:BB 85.45
C:46 [ASN] 1:730 [G] 3.44 1:721 [U] 85.45
C:46 [ASN] 1:731 [U] 3.59 1:720 [A] 85.45
C:47 [SER] 1:378 [A] 4.32 31.17
C:47 [SER] 1:728 [C] 3.79 1:723 [G] 31.17
C:47 [SER] 1:729 [A] 4.36 31.17
C:47 [SER] 1:730 [G] 3.66 1:721 [U] 31.17
C:48 [ARG] 1:378 [A] 3.32 88.5
C:48 [ARG] 1:729 [A] 4.51 88.5
C:48 [ARG] 1:1519 [U] 4.65 1:1471 [G] 88.5
C:49 [GLN] 1:375 [A] 4.8 7:1809 [U] 90.57
C:49 [GLN] 1:376 [A] 3.26 7:1808 [U] base:SC, sugar:SC 90.57
C:49 [GLN] 1:377 [G] 3.02 7:1807 [C] 90.57
C:49 [GLN] 1:378 [A] 2.61 90.57
C:49 [GLN] 1:729 [A] 3.09 base/AA stacks 90.57
C:49 [GLN] 7:1808 [U] 4.93 1:376 [A] 90.57
C:49 [GLN] 7:1809 [U] 2.92 1:375 [A] base:SC 90.57
C:50 [ALA] 1:377 [G] 4.7 7:1807 [C] 68.2
C:50 [ALA] 7:1808 [U] 3.28 1:376 [A] 68.2
C:50 [ALA] 7:1809 [U] 4.39 1:375 [A] 68.2
C:51 [TYR] 1:377 [G] 4.47 7:1807 [C] 76.36
C:51 [TYR] 1:378 [A] 4.48 76.36
C:51 [TYR] 1:379 [C] 3.54 7:1806 [G] 76.36
C:51 [TYR] 1:1520 [A] 4.25 1:1470 [U] 76.36
C:51 [TYR] 1:1521 [G] 3.02 76.36
C:51 [TYR] 7:1808 [U] 3.7 1:376 [A] 76.36
C:52 [ALA] 7:1807 [C] 2.66 1:377 [G] sugar:BB 81.89
C:52 [ALA] 7:1808 [U] 3.23 1:376 [A] sugar:BB 81.89
C:53 [VAL] 1:385 [G] 4.57 83.48
C:53 [VAL] 1:386 [C] 3.81 83.48
C:53 [VAL] 1:1521 [G] 3.65 83.48
C:53 [VAL] 7:1807 [C] 3.59 1:377 [G] 83.48
C:53 [VAL] 7:1808 [U] 4.18 1:376 [A] 83.48
C:54 [ASN] 1:386 [C] 2.96 76.63
C:54 [ASN] 7:1807 [C] 3.35 1:377 [G] 76.63
C:54 [ASN] 7:1808 [U] 3.38 1:376 [A] 76.63
C:55 [ARG] 1:367 [A] 4.03 16.29
C:55 [ARG] 1:368 [G] 2.32 16.29
C:55 [ARG] 7:1808 [U] 4.81 1:376 [A] 16.29
C:56 [LEU] 1:368 [G] 3.48 0.5
C:56 [LEU] 1:387 [G] 4.01 0.5
C:57 [SER] 1:385 [G] 4.84 91.3
C:57 [SER] 1:386 [C] 2.96 91.3
C:57 [SER] 1:387 [G] 3.88 91.3
C:58 [GLY] 1:387 [G] 3.36 93.87
C:59 [MET] 1:387 [G] 4.75 54.71
C:59 [MET] 1:984 [A] 3.34 54.71
C:60 [ASN] 1:368 [G] 3.97 69.76
C:60 [ASN] 1:387 [G] 4.1 69.76
C:60 [ASN] 1:404 [G] 4.11 1:395 [A] 69.76
C:61 [HIS] 1:387 [G] 4.31 72.93
C:61 [HIS] 1:404 [G] 3.03 1:395 [A] 72.93
C:61 [HIS] 1:405 [A] 3.36 1:394 [U] 72.93
C:61 [HIS] 1:981 [C] 3.67 1:861 [G] 72.93
C:62 [SER] 1:403 [C] 3.36 1:396 [G] 89.62
C:62 [SER] 1:404 [G] 3.59 1:395 [A] 89.62
C:62 [SER] 1:980 [A] 2.83 1:862 [U] 89.62
C:62 [SER] 1:981 [C] 3.75 1:861 [G] 89.62
C:64 [HIS] 1:980 [A] 4.63 1:862 [U] 48.21
C:64 [HIS] 1:981 [C] 4.71 1:861 [G] 48.21
C:65 [SER] 1:856 [OMG] 4.28 1:989 [C] 90.88
C:65 [SER] 1:857 [A] 3.5 1:986 [U] 90.88
C:67 [GLY] 1:1528 [U] 4.2 88.13
C:68 [THR] 1:1528 [U] 3.3 base:SC 88.55
C:70 [ARG] 1:1528 [U] 3.72 86.63
C:71 [ALA] 1:1528 [U] 3.74 94.68
C:71 [ALA] 1:1529 [OMC] 4.91 1:690 [G] 94.68
C:72 [VAL] 1:1528 [U] 3.15 76.46
C:73 [ALA] 1:1528 [U] 3.52 87.42
C:73 [ALA] 1:1529 [OMC] 3.48 1:690 [G] 87.42
C:73 [ALA] 1:1530 [U] 4.02 1:689 [A] 87.42
C:74 [ARG] 1:855 [C] 3.02 1:990 [U] sugar:BB 94.29
C:74 [ARG] 1:856 [OMG] 3.28 1:989 [C] 94.29
C:74 [ARG] 1:990 [U] 3.19 1:855 [C] base:SC 94.29
C:74 [ARG] 1:1528 [U] 3.28 94.29
C:75 [ILE] 1:855 [C] 3.31 1:990 [U] 82.69
C:75 [ILE] 1:856 [OMG] 4.21 1:989 [C] 82.69
C:75 [ILE] 1:1529 [OMC] 4.08 1:690 [G] 82.69
C:75 [ILE] 1:1530 [U] 3.57 1:689 [A] 82.69
C:76 [PRO] 1:855 [C] 3.93 1:990 [U] 83.22
C:76 [PRO] 1:856 [OMG] 3.29 1:989 [C] 83.22
C:77 [ARG] 1:1529 [OMC] 4.96 1:690 [G] 93.89
C:77 [ARG] 1:1530 [U] 3.07 1:689 [A] 93.89
C:77 [ARG] 1:1531 [U] 4.21 1:688 [A] 93.89
C:78 [ILE] 1:403 [C] 4.89 1:396 [G] 80.25
C:78 [ILE] 1:404 [G] 3.74 1:395 [A] 80.25
C:79 [SER] 1:403 [C] 2.9 1:396 [G] 58.76
C:79 [SER] 1:404 [G] 4.64 1:395 [A] 58.76
C:79 [SER] 1:980 [A] 4.04 1:862 [U] 58.76
C:80 [GLY] 1:403 [C] 3.82 1:396 [G] 86.65
C:81 [GLY] 1:396 [G] 3.48 1:403 [C] base:BB 61.49
C:81 [GLY] 1:397 [C] 3.4 1:402 [G] 61.49
C:82 [GLY] 1:395 [A] 4.63 1:404 [G] 76.16
C:82 [GLY] 1:396 [G] 2.24 1:403 [C] sugar:BB 76.16
C:82 [GLY] 1:397 [C] 3.59 1:402 [G] 76.16
C:83 [THR] 1:395 [A] 3.21 1:404 [G] base:SC 83.86
C:83 [THR] 1:396 [G] 3.82 1:403 [C] 83.86
C:83 [THR] 1:404 [G] 3.38 1:395 [A] sugar:SC 83.86
C:83 [THR] 1:405 [A] 3.28 1:394 [U] 83.86
C:84 [SER] 1:405 [A] 2.69 1:394 [U] sugar:SC 67.53
C:84 [SER] 1:406 [A] 3.73 1:392 [A] 67.53
C:84 [SER] 1:1532 [G] 4.96 1:687 [C] 67.53
C:85 [THR] 1:404 [G] 3.35 1:395 [A] 85.02
C:85 [THR] 1:405 [A] 3.28 1:394 [U] 85.02
C:87 [GLY] 1:1531 [U] 4.43 1:688 [A] 72.55
C:88 [ALA] 1:1530 [U] 4.78 1:689 [A] 78.43
C:88 [ALA] 1:1531 [U] 3.23 1:688 [A] 78.43
C:89 [GLY] 1:1530 [U] 3.74 1:689 [A] 71.68
C:89 [GLY] 1:1531 [U] 3.32 1:688 [A] 71.68
C:91 [PHE] 1:855 [C] 4.24 1:990 [U] 45.37
C:91 [PHE] 1:856 [OMG] 4.54 1:989 [C] 45.37
C:91 [PHE] 1:984 [A] 4.4 45.37
C:92 [GLY] 1:855 [C] 4.18 1:990 [U] 73.52
C:93 [ASN] 1:690 [G] 4.7 1:1529 [OMC] 87.28
C:93 [ASN] 1:691 [G] 3.29 1:1527 [A] 87.28
C:93 [ASN] 1:692 [A] 2.89 1:1524 [C] sugar:SC 87.28
C:93 [ASN] 1:854 [C] 3.3 1:991 [G] 87.28
C:93 [ASN] 1:855 [C] 4.7 1:990 [U] 87.28
C:93 [ASN] 1:1527 [A] 4.67 1:691 [G] 87.28
C:94 [MET] 1:690 [G] 3.05 1:1529 [OMC] base:BB 72.87
C:94 [MET] 1:691 [G] 3.3 1:1527 [A] 72.87
C:94 [MET] 1:854 [C] 4.02 1:991 [G] 72.87
C:94 [MET] 1:855 [C] 3.75 1:990 [U] 72.87
C:94 [MET] 1:1527 [A] 3.55 1:691 [G] 72.87
C:94 [MET] 1:1529 [OMC] 3.68 1:690 [G] 72.87
C:94 [MET] 1:1530 [U] 3.59 1:689 [A] 72.87
C:95 [CYS] 1:384 [A] 4.52 1:389 [A] 69.81
C:95 [CYS] 1:1529 [OMC] 4.67 1:690 [G] 69.81
C:95 [CYS] 1:1530 [U] 3.26 1:689 [A] 69.81
C:96 [ARG] 1:383 [U] 3.34 sugar:SC 85.34
C:96 [ARG] 1:384 [A] 3.61 1:389 [A] 85.34
C:96 [ARG] 1:405 [A] 4.8 1:394 [U] 85.34
C:96 [ARG] 1:406 [A] 2.92 1:392 [A] 85.34
C:96 [ARG] 1:407 [A] 4.54 85.34
C:96 [ARG] 1:1530 [U] 3.05 1:689 [A] sugar:BB 85.34
C:96 [ARG] 1:1531 [U] 3.39 1:688 [A] 85.34
C:97 [GLY] 1:383 [U] 4.16 68.96
C:97 [GLY] 1:384 [A] 2.91 1:389 [A] 68.96
C:98 [GLY] 1:384 [A] 4.52 1:389 [A] 89.15
C:98 [GLY] 1:385 [G] 4.33 89.15
C:99 [ARG] 1:854 [C] 3.77 1:991 [G] 82.36
C:99 [ARG] 1:855 [C] 2.44 1:990 [U] 82.36
C:99 [ARG] 1:984 [A] 3.45 base/AA stacks 82.36
C:100 [MET] 1:385 [G] 4.38 83.43
C:100 [MET] 1:984 [A] 4.88 83.43
C:100 [MET] 1:1521 [G] 3.66 83.43
C:101 [PHE] 1:692 [A] 3.35 1:1524 [C] 74.49
C:101 [PHE] 1:693 [G] 3.75 1:993 [U] 74.49
C:101 [PHE] 1:694 [U] 3.41 1:852 [A] 74.49
C:101 [PHE] 1:851 [G] 4.33 74.49
C:101 [PHE] 1:853 [C] 3.29 1:992 [G] 74.49
C:101 [PHE] 1:854 [C] 3.57 1:991 [G] 74.49
C:101 [PHE] 1:1521 [G] 4.93 74.49
C:102 [ALA] 1:694 [U] 3.24 1:852 [A] 77.54
C:102 [ALA] 1:851 [G] 3.63 77.54
C:102 [ALA] 1:984 [A] 4.94 77.54
C:103 [PRO] 1:851 [G] 3.77 87.9
C:103 [PRO] 1:984 [A] 3.47 87.9
C:104 [THR] 1:1521 [G] 4.0 83.83
C:105 [LYS] 1:695 [OMC] 4.06 1:850 [G] 71.45
C:105 [LYS] 1:851 [G] 3.4 71.45
C:106 [ILE] 7:1808 [U] 3.48 1:376 [A] 55.68
C:106 [ILE] 7:1809 [U] 3.49 1:375 [A] 55.68
C:107 [PHE] 1:695 [OMC] 3.69 1:850 [G] 13.1
C:107 [PHE] 1:696 [A] 3.39 1:849 [U] 13.1
C:108 [ARG] 1:695 [OMC] 3.42 1:850 [G] 88.6
C:108 [ARG] 1:696 [A] 3.74 1:849 [U] 88.6
C:108 [ARG] 1:1520 [A] 3.36 1:1470 [U] 88.6
C:108 [ARG] 1:1521 [G] 2.2 88.6
C:109 [ARG] 1:695 [OMC] 4.34 1:850 [G] 68.9
C:109 [ARG] 1:696 [A] 2.74 1:849 [U] 68.9
C:109 [ARG] 1:697 [A2M] 4.28 1:848 [U] 68.9
C:109 [ARG] 1:841 [U] 4.82 1:704 [G] 68.9
C:109 [ARG] 1:842 [G] 2.45 1:703 [C] 68.9
C:109 [ARG] 1:843 [C] 4.05 1:702 [A] 68.9
C:111 [HIS] 1:729 [A] 4.36 66.72
C:111 [HIS] 1:730 [G] 4.11 1:721 [U] 66.72
C:112 [ARG] 1:842 [G] 3.59 1:703 [C] 71.79
C:112 [ARG] 1:843 [C] 4.34 1:702 [A] 71.79
C:113 [LYS] 1:713 [A] 3.32 1:737 [U] sugar:SC 71.78
C:113 [LYS] 1:714 [G] 3.58 71.78
C:113 [LYS] 1:840 [G] 4.68 1:705 [C] 71.78
C:113 [LYS] 1:841 [U] 3.25 1:704 [G] 71.78
C:113 [LYS] 1:842 [G] 4.72 1:703 [C] 71.78
C:114 [ILE] 1:713 [A] 4.37 1:737 [U] 67.28
C:115 [ASN] 1:706 [G] 4.7 1:839 [U] 85.98
C:115 [ASN] 1:712 [G] 3.4 1:738 [C] 85.98
C:115 [ASN] 1:713 [A] 3.48 1:737 [U] 85.98
C:115 [ASN] 1:840 [G] 2.39 1:705 [C] base:SC, sugar:SC 85.98
C:115 [ASN] 1:841 [U] 4.02 1:704 [G] 85.98
C:116 [LEU] 1:712 [G] 4.9 1:738 [C] 43.24
C:116 [LEU] 1:713 [A] 2.69 1:737 [U] 43.24
C:116 [LEU] 1:733 [C] 4.05 1:717 [G] 43.24
C:116 [LEU] 1:734 [U] 4.36 1:716 [A] 43.24
C:117 [HIS] 1:706 [G] 2.67 1:839 [U] sugar:SC 70.54
C:117 [HIS] 1:707 [C] 3.66 1:838 [G] 70.54
C:117 [HIS] 1:712 [G] 4.57 1:738 [C] 70.54
C:117 [HIS] 1:713 [A] 4.88 1:737 [U] 70.54
C:118 [GLN] 1:705 [C] 2.61 1:840 [G] sugar:SC 70.23
C:118 [GLN] 1:706 [G] 3.72 1:839 [U] 70.23
C:118 [GLN] 1:840 [G] 3.16 1:705 [C] base:SC 70.23
C:119 [LYS] 1:732 [A] 3.74 1:719 [U] 60.57
C:120 [ARG] 1:733 [C] 2.89 1:717 [G] 85.35
C:120 [ARG] 1:734 [U] 2.99 1:716 [A] 85.35
C:121 [PHE] 1:706 [G] 4.0 1:839 [U] 42.26
C:123 [VAL] 1:732 [A] 4.73 1:719 [U] 62.28
C:139 [ARG] 1:1475 [G] 2.65 1:1515 [C] sugar:SC, sugar:SC 90.54
C:139 [ARG] 1:1476 [U] 2.95 1:1514 [G] 90.54
C:140 [GLY] 1:1476 [U] 3.54 1:1514 [G] 94.36
C:140 [GLY] 1:1477 [U] 3.27 1:1513 [G] 94.36
C:141 [HIS] 1:1476 [U] 4.86 1:1514 [G] 94.78
C:142 [ARG] 1:1477 [U] 2.77 1:1513 [G] 51.01
C:142 [ARG] 1:1478 [A] 3.75 1:1512 [C] 51.01
C:144 [ASP] 1:206 [A] 2.42 42.01
C:144 [ASP] 1:207 [C] 3.97 42.01
C:145 [ASN] 1:207 [C] 2.26 sugar:SC 27.79
C:145 [ASN] 1:208 [C] 3.92 27.79
C:161 [GLU] 1:247 [A] 3.64 7.05
C:162 [LYS] 1:246 [A] 3.39 83.52
C:162 [LYS] 1:247 [A] 2.89 83.52
C:163 [THR] 1:246 [A] 3.43 97.06
C:163 [THR] 1:247 [A] 2.99 97.06
C:163 [THR] 1:248 [A] 4.27 1:265 [U] 97.06
C:164 [LYS] 1:246 [A] 4.17 81.09
C:164 [LYS] 1:247 [A] 4.81 81.09
C:167 [MET] 1:246 [A] 3.39 51.53
C:181 [ARG] 1:1476 [U] 3.5 1:1514 [G] 78.23
C:181 [ARG] 1:1477 [U] 2.71 1:1513 [G] 78.23
C:183 [ASN] 1:249 [G] 4.96 1:245 [C] 36.0
C:186 [ARG] 1:251 [A] 4.3 58.88
C:186 [ARG] 1:259 [G] 4.49 1:244 [C] 58.88
C:187 [GLU] 1:1477 [U] 4.75 1:1513 [G] 46.47
C:187 [GLU] 1:1478 [A] 3.05 1:1512 [C] base:SC, base:SC 46.47
C:187 [GLU] 1:1479 [G] 3.64 1:1511 [C] 46.47
C:187 [GLU] 1:1511 [C] 4.66 1:1479 [G] 46.47
C:187 [GLU] 1:1512 [C] 3.37 1:1478 [A] base:SC 46.47
C:188 [ILE] 1:257 [U] 3.81 49.79
C:188 [ILE] 1:258 [A] 4.51 1:191 [U] 49.79
C:188 [ILE] 1:1511 [C] 3.99 1:1479 [G] 49.79
C:188 [ILE] 1:1512 [C] 2.44 1:1478 [A] base:BB 49.79
C:189 [ARG] 1:1473 [A] 3.33 1:1517 [U] 92.45
C:189 [ARG] 1:1474 [G] 2.63 1:1516 [C] 92.45
C:189 [ARG] 1:1512 [C] 4.21 1:1478 [A] 92.45
C:190 [ALA] 1:1473 [A] 4.47 1:1517 [U] 79.12
C:190 [ALA] 1:1512 [C] 3.63 1:1478 [A] 79.12
C:190 [ALA] 1:1513 [G] 3.77 1:1477 [U] 79.12
C:191 [GLY] 1:1472 [G] 3.28 1:1518 [C] 91.43
C:191 [GLY] 1:1512 [C] 3.23 1:1478 [A] 91.43
C:191 [GLY] 7:1802 [C] 4.24 1:408 [G] 91.43
C:192 [ARG] 1:381 [G] 3.36 base/AA stacks 68.87
C:192 [ARG] 1:1471 [G] 4.59 1:1519 [U] 68.87
C:192 [ARG] 1:1472 [G] 2.68 1:1518 [C] 68.87
C:192 [ARG] 7:1801 [A] 4.49 1:410 [U] 68.87
C:192 [ARG] 7:1802 [C] 4.43 1:408 [G] 68.87
C:192 [ARG] 7:1803 [U] 4.21 1:382 [A] 68.87
C:193 [GLY] 1:1472 [G] 4.16 1:1518 [C] 88.94
C:193 [GLY] 1:1473 [A] 3.32 1:1517 [U] 88.94
C:194 [LYS] 1:1511 [C] 3.92 1:1479 [G] 91.59
C:194 [LYS] 1:1512 [C] 2.98 1:1478 [A] 91.59
C:194 [LYS] 7:1801 [A] 4.74 1:410 [U] 91.59
C:194 [LYS] 7:1802 [C] 2.76 1:408 [G] 91.59
C:195 [MET] 1:381 [G] 3.85 62.98
C:195 [MET] 7:1802 [C] 3.43 1:408 [G] 62.98
C:195 [MET] 7:1803 [U] 3.15 1:382 [A] 62.98
C:196 [ARG] 1:377 [G] 4.45 7:1807 [C] 98.82
C:196 [ARG] 1:379 [C] 2.98 7:1806 [G] base/AA stacks 98.82
C:196 [ARG] 1:380 [C] 2.61 7:1805 [G] 98.82
C:196 [ARG] 1:381 [G] 3.14 base:SC, base:SC 98.82
C:196 [ARG] 1:1472 [G] 4.7 1:1518 [C] 98.82
C:197 [ASN] 1:376 [A] 4.81 7:1808 [U] 92.87
C:197 [ASN] 1:377 [G] 3.36 7:1807 [C] 92.87
C:198 [ARG] 1:377 [G] 3.53 7:1807 [C] sugar:SC 95.33
C:198 [ARG] 1:378 [A] 3.78 95.33
C:198 [ARG] 1:379 [C] 2.53 7:1806 [G] 95.33
C:198 [ARG] 1:1472 [G] 2.97 1:1518 [C] 95.33
C:198 [ARG] 1:1473 [A] 2.72 1:1517 [U] 95.33
C:199 [ARG] 1:251 [A] 4.76 81.77
C:199 [ARG] 1:252 [G] 3.63 1:262 [C] 81.77
C:200 [TYR] 1:251 [A] 3.54 57.52
C:200 [TYR] 1:252 [G] 4.41 1:262 [C] 57.52
C:200 [TYR] 1:258 [A] 3.13 1:191 [U] 57.52
C:202 [ALA] 1:1476 [U] 4.25 1:1514 [G] 42.96
C:203 [ARG] 1:1476 [U] 3.11 1:1514 [G] base/AA stacks 72.64
C:203 [ARG] 1:1477 [U] 2.48 1:1513 [G] base:SC 72.64
C:203 [ARG] 1:1478 [A] 4.59 1:1512 [C] 72.64
C:204 [ARG] 1:1474 [G] 4.9 1:1516 [C] 62.74
C:204 [ARG] 1:1475 [G] 2.79 1:1515 [C] 62.74
C:204 [ARG] 1:1476 [U] 3.1 1:1514 [G] 62.74
C:213 [ASN] 1:720 [A] 2.59 1:731 [U] 46.28
C:213 [ASN] 1:721 [U] 2.89 1:730 [G] 46.28
C:217 [ARG] 1:247 [A] 3.25 base/AA stacks 55.5
C:218 [ALA] 1:247 [A] 4.93 84.08
C:220 [ARG] 1:247 [A] 4.91 88.21
C:220 [ARG] 1:248 [A] 3.83 1:265 [U] 88.21
C:220 [ARG] 1:249 [G] 4.98 1:245 [C] 88.21
C:220 [ARG] 1:726 [G] 3.62 88.21
C:221 [ASN] 1:246 [A] 2.66 base:SC, sugar:SC 97.69
C:221 [ASN] 1:248 [A] 2.94 1:265 [U] 97.69
C:221 [ASN] 1:249 [G] 3.17 1:245 [C] sugar:BB 97.69
C:222 [ILE] 1:246 [A] 4.45 78.59
C:222 [ILE] 1:249 [G] 4.65 1:245 [C] 78.59
C:223 [PHE] 1:249 [G] 3.47 1:245 [C] 70.49
C:223 [PHE] 1:250 [A] 4.46 70.49
C:229 [ASN] 1:720 [A] 3.33 1:731 [U] sugar:SC 42.24
C:231 [SER] 1:732 [A] 2.79 1:719 [U] sugar:BB 52.33
C:232 [ALA] 1:720 [A] 4.23 1:731 [U] 54.13
C:232 [ALA] 1:731 [U] 4.26 1:720 [A] 54.13
C:232 [ALA] 1:732 [A] 3.71 1:719 [U] 54.13
C:233 [LEU] 1:731 [U] 3.53 1:720 [A] 90.36
C:233 [LEU] 1:732 [A] 3.77 1:719 [U] 90.36
C:234 [ASN] 1:730 [G] 4.58 1:721 [U] 86.76
C:234 [ASN] 1:731 [U] 3.33 1:720 [A] 86.76
C:235 [LEU] 1:731 [U] 4.87 1:720 [A] 77.17
C:236 [LEU] 1:730 [G] 4.75 1:721 [U] 70.9
C:240 [PRO] 1:1474 [G] 4.08 1:1516 [C] 93.87
C:240 [PRO] 1:1475 [G] 3.03 1:1515 [C] sugar:BB 93.87
C:241 [GLY] 1:1474 [G] 2.89 1:1516 [C] base:BB, sugar:BB 97.61
C:241 [GLY] 1:1475 [G] 3.42 1:1515 [C] 97.61
C:241 [GLY] 1:1517 [U] 4.3 1:1473 [A] 97.61
C:242 [GLY] 1:1474 [G] 4.81 1:1516 [C] 82.16
C:243 [HIS] 1:1474 [G] 3.16 1:1516 [C] 77.04
C:243 [HIS] 1:1475 [G] 3.44 1:1515 [C] 77.04
C:243 [HIS] 1:1516 [C] 3.22 1:1474 [G] base:SC 77.04
C:271 [VAL] 1:733 [C] 3.3 1:717 [G] 1.1
C:271 [VAL] 1:734 [U] 3.64 1:716 [A] 1.1
C:272 [LYS] 1:732 [A] 3.96 1:719 [U] 76.99
C:272 [LYS] 1:733 [C] 3.45 1:717 [G] 76.99
C:272 [LYS] 1:734 [U] 3.79 1:716 [A] 76.99
C:273 [LYS] 1:733 [C] 4.77 1:717 [G] 36.15
C:273 [LYS] 1:734 [U] 2.88 1:716 [A] 36.15
C:273 [LYS] 1:735 [U] 3.69 1:715 [G] 36.15
C:278 [PRO] 1:707 [C] 4.26 1:838 [G] 65.93
C:291 [MET] 1:1441 [A] 3.32 75.32
C:292 [GLN] 1:1420 [G] 4.41 68.62
C:294 [GLU] 1:1420 [G] 3.97 42.04
C:297 [ARG] 1:1420 [G] 3.37 base/AA stacks 83.13
C:303 [LYS] 1:1418 [G] 4.06 1:1448 [C] 15.27
C:304 [LYS] 1:1418 [G] 4.51 1:1448 [C] 43.81
C:305 [LEU] 1:631 [G] 3.33 0.45
C:305 [LEU] 1:632 [A] 4.71 0.45
C:306 [GLN] 1:631 [G] 2.95 base:BB, base:BB 1.02
C:306 [GLN] 1:1417 [G] 3.35 1:1449 [C] 1.02
C:306 [GLN] 1:1418 [G] 4.01 1:1448 [C] 1.02
C:307 [ALA] 1:631 [G] 3.91 0.65
C:308 [LYS] 1:573 [U] 4.53 23.7
C:308 [LYS] 1:631 [G] 3.47 23.7
C:308 [LYS] 1:632 [A] 3.33 23.7
C:309 [LYS] 1:571 [A] 3.95 0.03
C:309 [LYS] 1:632 [A] 3.29 base:BB 0.03
C:309 [LYS] 1:635 [C] 4.34 1:1438 [G] 0.03
C:309 [LYS] 1:636 [U] 3.28 1:1437 [A] 0.03
C:309 [LYS] 1:1417 [G] 4.65 1:1449 [C] 0.03
C:310 [ALA] 1:571 [A] 4.19 1.91
C:310 [ALA] 1:632 [A] 4.32 1.91
C:311 [SER] 1:573 [U] 4.02 4.48
C:312 [ARG] 1:566 [G] 4.35 1:496 [C] 54.98
C:312 [ARG] 1:567 [G] 2.67 1:495 [C] 54.98
C:312 [ARG] 1:568 [U] 3.83 1:494 [A] 54.98
C:312 [ARG] 1:569 [G] 4.17 54.98
C:312 [ARG] 1:570 [A] 3.48 54.98
C:312 [ARG] 1:571 [A] 3.08 54.98
C:312 [ARG] 1:640 [U] 3.66 54.98
C:313 [TYR] 1:496 [C] 3.22 1:566 [G] 68.87
C:313 [TYR] 1:497 [A] 3.17 1:565 [U] 68.87
C:313 [TYR] 1:566 [G] 3.99 1:496 [C] 68.87
C:313 [TYR] 1:567 [G] 4.81 1:495 [C] 68.87
C:313 [TYR] 1:569 [G] 2.28 base:SC 68.87
C:313 [TYR] 1:572 [A] 3.2 68.87
C:313 [TYR] 1:573 [U] 3.96 68.87
C:314 [GLN] 1:497 [A] 2.57 1:565 [U] base:SC, sugar:SC 68.87
C:314 [GLN] 1:498 [G] 3.18 1:562 [U] sugar:SC 68.87
C:314 [GLN] 1:565 [U] 4.78 1:497 [A] 68.87
C:314 [GLN] 1:566 [G] 3.56 1:496 [C] 68.87
C:315 [THR] 1:498 [G] 3.28 1:562 [U] 68.87
C:315 [THR] 1:499 [C] 4.71 1:561 [G] 68.87
C:316 [PRO] 1:498 [G] 4.03 1:562 [U] 68.87
C:316 [PRO] 1:499 [C] 3.55 1:561 [G] 68.87
C:317 [THR] 1:498 [G] 3.77 1:562 [U] 52.12
C:317 [THR] 1:499 [C] 2.63 1:561 [G] 52.12
C:318 [ASN] 1:498 [G] 4.74 1:562 [U] 92.98
C:318 [ASN] 1:499 [C] 2.5 1:561 [G] 92.98
C:318 [ASN] 1:500 [C] 2.8 1:560 [G] 92.98
C:321 [LYS] 1:553 [A] 4.76 47.28
C:321 [LYS] 1:554 [A] 4.95 1:502 [U] 47.28
C:322 [ASN] 1:498 [G] 3.17 1:562 [U] 80.43
C:322 [ASN] 1:499 [C] 2.98 1:561 [G] 80.43
C:322 [ASN] 1:576 [G] 3.19 80.43
C:323 [ARG] 1:553 [A] 3.27 base:SC 0.6
C:323 [ARG] 1:554 [A] 4.78 1:502 [U] 0.6
C:323 [ARG] 1:575 [A] 3.41 0.6
C:323 [ARG] 1:576 [G] 3.19 0.6
C:324 [ARG] 1:497 [A] 3.15 1:565 [U] 2.93
C:324 [ARG] 1:498 [G] 2.34 1:562 [U] 2.93
C:324 [ARG] 1:573 [U] 4.71 2.93
C:324 [ARG] 1:574 [G] 3.25 1:630 [U] 2.93
C:324 [ARG] 1:575 [A] 4.0 2.93
C:324 [ARG] 1:576 [G] 2.92 base:BB 2.93
C:325 [LEU] 1:499 [C] 4.98 1:561 [G] 40.09
C:326 [ARG] 1:551 [A] 3.78 68.38
C:326 [ARG] 1:552 [G] 3.04 68.38
C:326 [ARG] 1:553 [A] 3.82 68.38
C:327 [LEU] 1:575 [A] 3.35 0.45
C:328 [ARG] 1:573 [U] 4.73 59.37
C:328 [ARG] 1:574 [G] 2.57 1:630 [U] 59.37
C:332 [TYR] 1:586 [U] 3.19 1:623 [U] 42.43
C:332 [TYR] 1:587 [G] 4.05 1:622 [C] 42.43
C:333 [VAL] 1:575 [A] 3.73 56.4
C:334 [LYS] 1:575 [A] 3.52 4.03
C:334 [LYS] 1:625 [C] 4.59 1:581 [G] 4.03
C:334 [LYS] 1:626 [U] 3.66 1:580 [A] 4.03
C:334 [LYS] 1:627 [C] 4.19 1:579 [G] 4.03
C:335 [ARG] 1:584 [U] 3.4 base:SC, sugar:SC 41.72
C:335 [ARG] 1:585 [U] 2.98 1:624 [U] base:SC 41.72
C:335 [ARG] 1:586 [U] 3.04 1:623 [U] 41.72
C:335 [ARG] 1:624 [U] 4.1 1:585 [U] 41.72
C:335 [ARG] 1:626 [U] 4.24 1:580 [A] 41.72
C:336 [GLU] 1:551 [A] 4.0 2.99
C:336 [GLU] 1:586 [U] 4.37 1:623 [U] 2.99
C:337 [THR] 1:552 [G] 3.44 41.16
C:337 [THR] 1:553 [A] 3.57 41.16
C:337 [THR] 1:575 [A] 2.96 base:SC, base:SC 41.16
C:337 [THR] 1:625 [C] 4.91 1:581 [G] 41.16
C:338 [ALA] 1:586 [U] 3.52 1:623 [U] 45.84
C:338 [ALA] 1:623 [U] 4.37 1:586 [U] 45.84
C:338 [ALA] 1:624 [U] 3.91 1:585 [U] 45.84
C:338 [ALA] 1:625 [C] 4.3 1:581 [G] 45.84
C:339 [ALA] 1:586 [U] 3.36 1:623 [U] base:BB 0.94
C:339 [ALA] 1:587 [G] 3.45 1:622 [C] 0.94
C:340 [ALA] 1:551 [A] 4.79 1.15
C:340 [ALA] 1:552 [G] 3.97 1.15
C:341 [LYS] 1:552 [G] 4.48 3.54
C:341 [LYS] 1:553 [A] 3.3 3.54
C:341 [LYS] 1:623 [U] 3.85 1:586 [U] 3.54
C:341 [LYS] 1:624 [U] 4.29 1:585 [U] 3.54
C:341 [LYS] 1:625 [C] 3.57 1:581 [G] 3.54
C:342 [GLY] 1:587 [G] 4.13 1:622 [C] 8.33
C:342 [GLY] 1:588 [A] 4.81 1:621 [U] 8.33
C:342 [GLY] 1:623 [U] 3.26 1:586 [U] 8.33
C:343 [MET] 1:506 [G] 3.21 1:549 [C] 40.76
C:343 [MET] 1:507 [C] 3.62 1:548 [G] 40.76
C:343 [MET] 1:587 [G] 4.0 1:622 [C] 40.76
C:343 [MET] 1:588 [A] 3.62 1:621 [U] 40.76
C:344 [ARG] 1:505 [U] 2.78 base:SC 1.1
C:344 [ARG] 1:506 [G] 3.63 1:549 [C] 1.1
C:344 [ARG] 1:550 [A] 4.85 1.1
C:344 [ARG] 1:551 [A] 3.71 1.1
C:344 [ARG] 1:552 [G] 3.09 1.1
C:345 [ASN] 1:622 [C] 4.59 1:587 [G] 5.84
C:345 [ASN] 1:623 [U] 3.48 1:586 [U] 5.84
C:347 [ALA] 1:622 [C] 4.98 1:587 [G] 19.35
C:348 [ASN] 1:587 [G] 4.2 1:622 [C] 37.13
C:348 [ASN] 1:588 [A] 4.45 1:621 [U] 37.13
C:348 [ASN] 1:622 [C] 2.79 1:587 [G] base:SC, sugar:SC 37.13
C:348 [ASN] 1:623 [U] 3.44 1:586 [U] 37.13
C:349 [ARG] 1:505 [U] 4.63 39.94
C:349 [ARG] 1:506 [G] 2.44 1:549 [C] 39.94
C:349 [ARG] 1:507 [C] 4.5 1:548 [G] 39.94
C:349 [ARG] 1:543 [G] 3.23 39.94
C:352 [ARG] 1:507 [C] 3.56 1:548 [G] 61.03
C:352 [ARG] 1:508 [A] 2.97 1:547 [U] 61.03
C:352 [ARG] 1:588 [A] 3.15 1:621 [U] 61.03
C:352 [ARG] 1:589 [G] 2.88 61.03
C:353 [ARG] 1:539 [C] 4.88 47.85
C:353 [ARG] 1:543 [G] 4.05 47.85
C:354 [LYS] 1:539 [C] 4.26 54.24
C:355 [ALA] 1:589 [G] 4.39 47.56
C:355 [ALA] 1:590 [C] 3.48 47.56
C:357 [MET] 1:539 [C] 3.61 29.54
C:357 [MET] 1:541 [A] 3.91 29.54
C:359 [ARG] 1:589 [G] 3.06 44.64
C:359 [ARG] 1:590 [C] 3.32 44.64
C:359 [ARG] 1:610 [A] 3.58 44.64
C:359 [ARG] 1:611 [C] 2.75 base/AA stacks 44.64
C:360 [VAL] 1:610 [A] 3.27 70.19
C:361 [THR] 1:539 [C] 4.19 66.4
C:362 [LYS] 1:609 [C] 4.82 1:596 [A] 71.68
C:363 [ALA] 1:608 [G] 4.88 1:597 [C] 57.96
C:363 [ALA] 1:609 [C] 3.71 1:596 [A] 57.96
C:363 [ALA] 1:610 [A] 3.38 57.96
C:364 [LYS] 1:610 [A] 3.93 68.87
C:366 [ALA] 1:608 [G] 4.09 1:597 [C] 68.87
C:366 [ALA] 1:609 [C] 4.78 1:596 [A] 68.87
C:367 [ALA] 1:608 [G] 4.24 1:597 [C] 68.87
C:367 [ALA] 1:610 [A] 3.78 68.87

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group126 6AZ3_C_1,7 C: Ribosomal protein l1a, putative, Leishmania donovani (natural) 1: rRNA alpha, Leishmania donovani (natural) 7: rRNA 5.8s, Leishmania donovani (natural) A0A3S5H7L0 Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1F_1A 6AZ3_C_1,7 0.58 0.63 2.26 0.16 compare
1VQ8_C_0 6AZ3_C_1,7 0.71 0.69 1.51 0.29 compare
1YHQ_C_0 6AZ3_C_1,7 0.72 0.69 1.45 0.3 compare
6AZ3_C_1,7 7O7Y_BC_B5,B8 0.68 0.92 2.2 0.44 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
6AZ3_C_1,7 7K00_e_a 0.61 0.62 2.19 0.2 compare
6AZ3_C_1,7 6S0Z_E_A 0.60 0.63 2.39 0.22 compare
6AZ3_C_1,7 7RYG_E_A 0.58 0.61 2.27 0.21 compare
3CC2_C_0 6AZ3_C_1,7 0.72 0.69 1.44 0.3 compare