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All interfaces > All interologs > Interface groups > group126 > 7O7Y_BC_B5,B8

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Protein

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Licorice
Surface

RNA

Cartoon
Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_BC
7O7Y_B5,B8
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BC:2 [AYA] B5:661 [A] 3.21 sugar:SC 59.16
BC:2 [AYA] B5:662 [C] 3.89 59.16
BC:3 [CYS] B5:491 [C] 3.91 B5:657 [G] sugar:BB 36.9
BC:3 [CYS] B5:492 [G] 3.21 B5:656 [C] 36.9
BC:3 [CYS] B5:493 [U] 3.33 36.9
BC:3 [CYS] B5:494 [G] 4.46 B5:655 [C] 36.9
BC:4 [ALA] B5:491 [C] 3.39 B5:657 [G] 59.27
BC:4 [ALA] B5:492 [G] 4.82 B5:656 [C] 59.27
BC:4 [ALA] B5:661 [A] 4.64 59.27
BC:4 [ALA] B5:662 [C] 3.53 59.27
BC:5 [ARG] B5:491 [C] 3.27 B5:657 [G] sugar:BB 69.06
BC:5 [ARG] B5:492 [G] 3.73 B5:656 [C] 69.06
BC:6 [PRO] B5:662 [C] 3.59 74.03
BC:7 [LEU] B5:490 [C] 4.25 B5:658 [G] 46.36
BC:7 [LEU] B5:491 [C] 4.35 B5:657 [G] 46.36
BC:23 [THR] B5:491 [C] 4.41 B5:657 [G] 34.88
BC:28 [PHE] B5:661 [A] 3.89 77.03
BC:29 [LYS] B5:661 [A] 2.73 base:BB, sugar:SC 43.65
BC:30 [ALA] B5:661 [A] 4.83 69.33
BC:33 [ARG] B5:1294 [C] 3.0 B5:1461 [G] 93.74
BC:33 [ARG] B5:1295 [G] 2.49 B5:1460 [C] 93.74
BC:35 [ASP] B5:1294 [C] 4.13 B5:1461 [G] 95.21
BC:36 [ILE] B5:1294 [C] 3.76 B5:1461 [G] 65.62
BC:36 [ILE] B5:1295 [G] 3.67 B5:1460 [C] 65.62
BC:38 [ASN] B5:2182 [G] 2.82 B5:2138 [C] sugar:SC 33.9
BC:38 [ASN] B5:2183 [C] 4.39 B5:2137 [G] 33.9
BC:39 [PHE] B5:1293 [G] 4.38 B5:1462 [C] 42.88
BC:39 [PHE] B5:1462 [C] 3.39 B5:1293 [G] 42.88
BC:39 [PHE] B5:1463 [A] 3.34 B5:1292 [U] 42.88
BC:41 [HIS] B5:2139 [G] 3.47 B5:2181 [C] sugar:SC 73.83
BC:42 [THR] B5:349 [A] 4.8 60.12
BC:42 [THR] B5:2182 [G] 4.29 B5:2138 [C] 60.12
BC:42 [THR] B5:2183 [C] 3.21 B5:2137 [G] 60.12
BC:42 [THR] B5:2184 [A] 4.31 B5:2136 [U] 60.12
BC:43 [ASN] B5:1463 [A] 3.3 B5:1292 [U] 68.7
BC:44 [LEU] B5:1316 [A] 4.43 46.39
BC:44 [LEU] B5:1317 [A] 3.57 46.39
BC:44 [LEU] B5:1318 [G] 4.6 B5:1307 [C] 46.39
BC:45 [ARG] B5:349 [A] 3.42 base/AA stacks 45.28
BC:45 [ARG] B5:2138 [C] 2.75 B5:2182 [G] base:SC, sugar:SC 45.28
BC:45 [ARG] B5:2139 [G] 2.9 B5:2181 [C] base/AA stacks 45.28
BC:45 [ARG] B5:2182 [G] 3.37 B5:2138 [C] 45.28
BC:45 [ARG] B5:2183 [C] 3.98 B5:2137 [G] 45.28
BC:46 [LYS] B5:349 [A] 3.73 71.22
BC:46 [LYS] B5:1464 [C] 4.46 B5:1291 [G] 71.22
BC:46 [LYS] B5:2183 [C] 3.91 B5:2137 [G] 71.22
BC:46 [LYS] B5:2184 [A] 2.63 B5:2136 [U] 71.22
BC:47 [ASN] B5:1315 [A] 4.08 84.9
BC:47 [ASN] B5:1316 [A] 3.43 84.9
BC:47 [ASN] B5:1317 [A] 2.74 84.9
BC:48 [ASN] B5:349 [A] 4.45 24.69
BC:48 [ASN] B5:1313 [C] 4.91 24.69
BC:48 [ASN] B5:1314 [G] 3.04 24.69
BC:48 [ASN] B5:1315 [A] 4.12 24.69
BC:48 [ASN] B5:1316 [A] 3.98 24.69
BC:49 [ARG] B5:349 [A] 3.1 base/AA stacks 85.26
BC:49 [ARG] B5:2184 [A] 4.82 B5:2136 [U] 85.26
BC:50 [GLN] B5:346 [G] 4.69 B8:4836 [C] 89.17
BC:50 [GLN] B5:347 [A] 2.42 B8:4835 [U] base:SC, sugar:SC 89.17
BC:50 [GLN] B5:348 [G] 3.0 B8:4834 [C] 89.17
BC:50 [GLN] B5:349 [A] 2.77 89.17
BC:50 [GLN] B5:1315 [A] 3.28 base/AA stacks 89.17
BC:50 [GLN] B8:4836 [C] 3.8 B5:346 [G] 89.17
BC:51 [PRO] B5:348 [G] 4.97 B8:4834 [C] 69.46
BC:51 [PRO] B5:1315 [A] 4.93 69.46
BC:51 [PRO] B8:4835 [U] 2.84 B5:347 [A] 69.46
BC:51 [PRO] B8:4836 [C] 3.55 B5:346 [G] 69.46
BC:52 [TYR] B5:348 [G] 4.41 B8:4834 [C] 74.29
BC:52 [TYR] B5:349 [A] 4.54 74.29
BC:52 [TYR] B5:350 [C] 3.18 B8:4833 [G] 74.29
BC:52 [TYR] B5:2185 [G] 4.43 B5:2135 [C] 74.29
BC:52 [TYR] B5:2186 [G] 2.7 74.29
BC:52 [TYR] B8:4835 [U] 3.83 B5:347 [A] 74.29
BC:53 [ALA] B8:4834 [C] 2.31 B5:348 [G] sugar:BB 83.15
BC:53 [ALA] B8:4835 [U] 3.11 B5:347 [A] sugar:BB 83.15
BC:54 [VAL] B5:356 [G] 4.58 77.93
BC:54 [VAL] B5:357 [U] 3.56 77.93
BC:54 [VAL] B5:2186 [G] 3.21 77.93
BC:54 [VAL] B8:4834 [C] 3.53 B5:348 [G] 77.93
BC:54 [VAL] B8:4835 [U] 4.24 B5:347 [A] 77.93
BC:55 [SER] B5:357 [U] 2.69 68.41
BC:55 [SER] B8:4834 [C] 3.51 B5:348 [G] 68.41
BC:55 [SER] B8:4835 [U] 3.55 B5:347 [A] 68.41
BC:56 [GLU] B5:340 [C] 2.99 base:SC, base:SC 3.69
BC:56 [GLU] B8:4835 [U] 4.52 B5:347 [A] 3.69
BC:57 [LEU] B5:358 [C] 3.97 3.06
BC:58 [ALA] B5:357 [U] 3.36 91.28
BC:58 [ALA] B5:358 [C] 3.39 91.28
BC:59 [GLY] B5:358 [C] 3.04 93.09
BC:60 [HIS] B5:358 [C] 4.69 56.4
BC:60 [HIS] B5:1605 [A] 3.14 base/AA stacks 56.4
BC:61 [GLN] B5:357 [U] 3.26 66.55
BC:61 [GLN] B5:358 [C] 3.16 66.55
BC:61 [GLN] B5:375 [G] 4.1 B5:366 [A] 66.55
BC:62 [THR] B5:374 [G] 4.48 B5:367 [C] 69.05
BC:62 [THR] B5:375 [G] 2.45 B5:366 [A] 69.05
BC:62 [THR] B5:1602 [U] 3.78 B5:1482 [A] 69.05
BC:63 [SER] B5:374 [G] 3.59 B5:367 [C] 86.03
BC:63 [SER] B5:375 [G] 3.89 B5:366 [A] 86.03
BC:63 [SER] B5:1600 [C] 4.91 B5:1484 [G] 86.03
BC:63 [SER] B5:1601 [A] 2.53 B5:1483 [U] 86.03
BC:63 [SER] B5:1602 [U] 3.27 B5:1482 [A] 86.03
BC:66 [SER] B5:1477 [OMG] 3.91 B5:1610 [C] 86.73
BC:66 [SER] B5:1478 [A] 3.36 B5:1607 [U] 86.73
BC:68 [GLY] B5:2193 [U] 4.54 86.31
BC:69 [THR] B5:2193 [U] 2.81 base:SC 94.4
BC:69 [THR] B5:3638 [A] 3.17 94.4
BC:69 [THR] B5:3639 [G] 4.88 B5:4143 [A] 94.4
BC:69 [THR] B5:4136 [A] 3.74 B5:3644 [U] 94.4
BC:70 [GLY] B5:2193 [U] 4.23 92.72
BC:70 [GLY] B5:3637 [A] 3.15 92.72
BC:70 [GLY] B5:3638 [A] 3.18 92.72
BC:71 [ARG] B5:3637 [A] 4.05 89.27
BC:71 [ARG] B5:3638 [A] 3.52 89.27
BC:72 [ALA] B5:2193 [U] 3.3 97.82
BC:72 [ALA] B5:2194 [OMC] 4.51 B5:1279 [G] 97.82
BC:72 [ALA] B5:3637 [A] 3.37 97.82
BC:72 [ALA] B5:3638 [A] 2.9 97.82
BC:73 [VAL] B5:2193 [U] 3.0 77.25
BC:73 [VAL] B5:2194 [OMC] 4.38 B5:1279 [G] 77.25
BC:73 [VAL] B5:3638 [A] 4.4 77.25
BC:74 [ALA] B5:2193 [U] 3.76 89.77
BC:74 [ALA] B5:2194 [OMC] 3.21 B5:1279 [G] 89.77
BC:74 [ALA] B5:2195 [U] 3.7 B5:1278 [A] 89.77
BC:75 [ARG] B5:1476 [C] 4.42 B5:1611 [U] 96.75
BC:75 [ARG] B5:1477 [OMG] 3.19 B5:1610 [C] 96.75
BC:75 [ARG] B5:1611 [U] 3.03 B5:1476 [C] base:SC 96.75
BC:75 [ARG] B5:2193 [U] 3.69 96.75
BC:75 [ARG] B5:3638 [A] 3.41 base/AA stacks 96.75
BC:75 [ARG] B5:4136 [A] 4.41 B5:3644 [U] 96.75
BC:75 [ARG] B5:4137 [G] 2.62 B5:3643 [C] 96.75
BC:76 [ILE] B5:1476 [C] 3.85 B5:1611 [U] 84.3
BC:76 [ILE] B5:1477 [OMG] 4.47 B5:1610 [C] 84.3
BC:76 [ILE] B5:2194 [OMC] 4.08 B5:1279 [G] 84.3
BC:76 [ILE] B5:2195 [U] 3.92 B5:1278 [A] 84.3
BC:77 [PRO] B5:1476 [C] 3.69 B5:1611 [U] 88.9
BC:77 [PRO] B5:1477 [OMG] 3.16 B5:1610 [C] 88.9
BC:78 [ARG] B5:2194 [OMC] 4.86 B5:1279 [G] 96.1
BC:78 [ARG] B5:2195 [U] 2.99 B5:1278 [A] 96.1
BC:78 [ARG] B5:2196 [U] 4.53 B5:1277 [A] 96.1
BC:79 [VAL] B5:374 [G] 4.4 B5:367 [C] 80.44
BC:79 [VAL] B5:375 [G] 3.62 B5:366 [A] 80.44
BC:80 [ARG] B5:374 [G] 2.7 B5:367 [C] 55.88
BC:80 [ARG] B5:375 [G] 4.88 B5:366 [A] 55.88
BC:80 [ARG] B5:1599 [C] 4.73 B5:1485 [G] 55.88
BC:80 [ARG] B5:1600 [C] 2.88 B5:1484 [G] 55.88
BC:80 [ARG] B5:1601 [A] 3.79 B5:1483 [U] 55.88
BC:81 [GLY] B5:374 [G] 3.81 B5:367 [C] 81.75
BC:82 [GLY] B5:367 [C] 4.63 B5:374 [G] 65.03
BC:82 [GLY] B5:368 [C] 3.27 B5:373 [G] 65.03
BC:82 [GLY] B5:374 [G] 3.47 B5:367 [C] base:BB 65.03
BC:83 [GLY] B5:366 [A] 4.63 B5:375 [G] 77.49
BC:83 [GLY] B5:367 [C] 2.37 B5:374 [G] sugar:BB 77.49
BC:83 [GLY] B5:368 [C] 3.09 B5:373 [G] 77.49
BC:83 [GLY] B5:374 [G] 4.79 B5:367 [C] 77.49
BC:84 [THR] B5:366 [A] 3.02 B5:375 [G] base:SC 84.06
BC:84 [THR] B5:367 [C] 4.12 B5:374 [G] 84.06
BC:84 [THR] B5:374 [G] 3.94 B5:367 [C] 84.06
BC:84 [THR] B5:375 [G] 3.57 B5:366 [A] sugar:SC 84.06
BC:84 [THR] B5:376 [A] 3.2 B5:365 [U] 84.06
BC:85 [HIS] B5:376 [A] 3.95 B5:365 [U] 57.69
BC:86 [ARG] B5:375 [G] 3.17 B5:366 [A] 77.49
BC:86 [ARG] B5:376 [A] 3.27 B5:365 [U] 77.49
BC:88 [GLY] B5:2196 [U] 4.22 B5:1277 [A] 74.2
BC:89 [GLN] B5:2195 [U] 4.56 B5:1278 [A] 77.6
BC:89 [GLN] B5:2196 [U] 3.18 B5:1277 [A] 77.6
BC:89 [GLN] B5:2197 [G] 3.71 B5:1276 [C] 77.6
BC:90 [GLY] B5:2195 [U] 3.5 B5:1278 [A] 64.03
BC:90 [GLY] B5:2196 [U] 3.49 B5:1277 [A] 64.03
BC:92 [PHE] B5:1476 [C] 4.04 B5:1611 [U] 44.46
BC:92 [PHE] B5:1605 [A] 4.62 44.46
BC:93 [GLY] B5:1476 [C] 4.29 B5:1611 [U] 73.26
BC:94 [ASN] B5:1279 [G] 4.59 B5:2194 [OMC] 88.41
BC:94 [ASN] B5:1280 [G] 2.99 B5:2192 [A] 88.41
BC:94 [ASN] B5:1281 [A] 3.15 B5:2189 [C] 88.41
BC:94 [ASN] B5:1475 [C] 2.69 B5:1612 [G] sugar:SC 88.41
BC:94 [ASN] B5:1476 [C] 4.37 B5:1611 [U] 88.41
BC:95 [MET] B5:1279 [G] 2.87 B5:2194 [OMC] base:BB 68.71
BC:95 [MET] B5:1280 [G] 3.4 B5:2192 [A] 68.71
BC:95 [MET] B5:1475 [C] 3.13 B5:1612 [G] 68.71
BC:95 [MET] B5:1476 [C] 3.48 B5:1611 [U] 68.71
BC:95 [MET] B5:2192 [A] 3.66 B5:1280 [G] 68.71
BC:95 [MET] B5:2194 [OMC] 3.49 B5:1279 [G] 68.71
BC:95 [MET] B5:2195 [U] 3.23 B5:1278 [A] 68.71
BC:96 [CYS] B5:355 [A] 4.37 B5:360 [A] 70.19
BC:96 [CYS] B5:2194 [OMC] 4.91 B5:1279 [G] 70.19
BC:96 [CYS] B5:2195 [U] 3.49 B5:1278 [A] 70.19
BC:97 [ARG] B5:354 [U] 2.86 sugar:SC 83.08
BC:97 [ARG] B5:355 [A] 3.65 B5:360 [A] 83.08
BC:97 [ARG] B5:376 [A] 4.39 B5:365 [U] 83.08
BC:97 [ARG] B5:377 [A] 2.64 B5:363 [A] 83.08
BC:97 [ARG] B5:378 [A] 3.52 83.08
BC:97 [ARG] B5:2195 [U] 3.05 B5:1278 [A] sugar:BB 83.08
BC:97 [ARG] B5:2196 [U] 3.5 B5:1277 [A] 83.08
BC:98 [GLY] B5:354 [U] 4.2 70.02
BC:98 [GLY] B5:355 [A] 2.63 B5:360 [A] 70.02
BC:99 [GLY] B5:355 [A] 4.35 B5:360 [A] 86.18
BC:99 [GLY] B5:356 [G] 4.65 86.18
BC:100 [ARG] B5:1475 [C] 3.98 B5:1612 [G] 82.87
BC:100 [ARG] B5:1476 [C] 2.51 B5:1611 [U] 82.87
BC:100 [ARG] B5:1605 [A] 3.34 base/AA stacks 82.87
BC:101 [MET] B5:356 [G] 4.3 87.62
BC:101 [MET] B5:1605 [A] 4.91 87.62
BC:101 [MET] B5:2186 [G] 3.4 87.62
BC:102 [PHE] B5:1281 [A] 3.48 B5:2189 [C] 69.57
BC:102 [PHE] B5:1282 [G] 3.59 B5:1614 [U] 69.57
BC:102 [PHE] B5:1283 [U] 3.36 B5:1473 [A] 69.57
BC:102 [PHE] B5:1474 [C] 3.44 B5:1613 [G] 69.57
BC:102 [PHE] B5:1475 [C] 3.49 B5:1612 [G] 69.57
BC:102 [PHE] B5:2186 [G] 4.96 69.57
BC:103 [ALA] B5:1283 [U] 3.32 B5:1473 [A] 75.07
BC:103 [ALA] B5:1472 [G] 3.63 75.07
BC:103 [ALA] B5:1605 [A] 4.73 75.07
BC:104 [PRO] B5:1472 [G] 4.17 84.45
BC:104 [PRO] B5:1605 [A] 3.29 84.45
BC:105 [THR] B5:2186 [G] 3.99 76.23
BC:106 [LYS] B5:1284 [OMC] 3.98 B5:1471 [G] 72.26
BC:106 [LYS] B5:1472 [G] 3.13 base:SC 72.26
BC:107 [THR] B8:4835 [U] 3.27 B5:347 [A] 55.79
BC:107 [THR] B8:4836 [C] 4.07 B5:346 [G] 55.79
BC:108 [TRP] B5:1284 [OMC] 3.59 B5:1471 [G] 16.48
BC:108 [TRP] B5:1285 [U] 3.25 B5:1470 [A] 16.48
BC:109 [ARG] B5:1284 [OMC] 3.56 B5:1471 [G] 86.0
BC:109 [ARG] B5:1285 [U] 3.51 B5:1470 [A] 86.0
BC:109 [ARG] B5:2185 [G] 3.95 B5:2135 [C] 86.0
BC:109 [ARG] B5:2186 [G] 3.08 86.0
BC:110 [ARG] B5:1284 [OMC] 4.47 B5:1471 [G] 65.57
BC:110 [ARG] B5:1285 [U] 2.81 B5:1470 [A] 65.57
BC:110 [ARG] B5:1286 [A] 3.7 B5:1469 [U] 65.57
BC:110 [ARG] B5:1463 [A] 2.75 B5:1292 [U] 65.57
BC:110 [ARG] B5:1464 [C] 4.14 B5:1291 [G] 65.57
BC:113 [ARG] B5:1463 [A] 3.2 B5:1292 [U] 70.62
BC:113 [ARG] B5:1464 [C] 4.28 B5:1291 [G] 70.62
BC:114 [ARG] B5:1301 [C] 3.07 B5:1326 [G] sugar:SC 71.29
BC:114 [ARG] B5:1302 [G] 3.38 B5:1321 [G] 71.29
BC:114 [ARG] B5:1303 [G] 3.24 base/AA stacks 71.29
BC:114 [ARG] B5:1461 [G] 3.04 B5:1294 [C] 71.29
BC:114 [ARG] B5:1462 [C] 3.24 B5:1293 [G] 71.29
BC:114 [ARG] B5:1463 [A] 4.42 B5:1292 [U] 71.29
BC:115 [VAL] B5:1302 [G] 3.95 B5:1321 [G] 64.34
BC:115 [VAL] B5:1462 [C] 4.71 B5:1293 [G] 64.34
BC:116 [ASN] B5:1295 [G] 3.76 B5:1460 [C] 84.96
BC:116 [ASN] B5:1301 [C] 3.76 B5:1326 [G] 84.96
BC:116 [ASN] B5:1302 [G] 3.25 B5:1321 [G] 84.96
BC:116 [ASN] B5:1461 [G] 2.56 B5:1294 [C] base:SC, sugar:SC 84.96
BC:116 [ASN] B5:1462 [C] 3.4 B5:1293 [G] 84.96
BC:117 [THR] B5:1302 [G] 2.87 B5:1321 [G] 46.35
BC:117 [THR] B5:1319 [C] 4.26 B5:1306 [G] 46.35
BC:118 [THR] B5:1295 [G] 3.27 B5:1460 [C] 71.97
BC:118 [THR] B5:1296 [C] 4.11 B5:1459 [G] 71.97
BC:118 [THR] B5:1301 [C] 3.85 B5:1326 [G] 71.97
BC:119 [GLN] B5:1294 [C] 2.88 B5:1461 [G] base:SC, sugar:SC 64.62
BC:119 [GLN] B5:1295 [G] 3.27 B5:1460 [C] base/AA stacks 64.62
BC:119 [GLN] B5:1461 [G] 3.03 B5:1294 [C] base:SC 64.62
BC:119 [GLN] B5:1462 [C] 4.82 B5:1293 [G] 64.62
BC:120 [LYS] B5:1317 [A] 4.79 64.11
BC:120 [LYS] B5:1318 [G] 3.2 B5:1307 [C] 64.11
BC:121 [ARG] B5:1319 [C] 2.67 B5:1306 [G] 82.55
BC:121 [ARG] B5:1320 [C] 3.36 B5:1305 [G] 82.55
BC:122 [TYR] B5:1295 [G] 3.89 B5:1460 [C] 45.16
BC:122 [TYR] B5:1296 [C] 4.13 B5:1459 [G] 45.16
BC:133 [LEU] B5:661 [A] 4.75 40.75
BC:140 [LYS] B5:2140 [G] 3.25 B5:2180 [C] 88.77
BC:140 [LYS] B5:2141 [U] 3.17 B5:2179 [G] 88.77
BC:140 [LYS] B5:2142 [G] 4.64 B5:2178 [C] 88.77
BC:141 [GLY] B5:2141 [U] 4.07 B5:2179 [G] 91.1
BC:141 [GLY] B5:2142 [G] 3.25 B5:2178 [C] 91.1
BC:142 [HIS] B5:2141 [U] 4.57 B5:2179 [G] 89.79
BC:143 [ARG] B5:2143 [A] 2.46 base:SC 51.55
BC:162 [LYS] B5:224 [U] 3.73 31.62
BC:163 [LYS] B5:223 [G] 3.0 86.29
BC:163 [LYS] B5:224 [U] 2.71 86.29
BC:164 [THR] B5:223 [G] 3.27 94.61
BC:164 [THR] B5:224 [U] 2.77 94.61
BC:164 [THR] B5:225 [G] 3.94 B5:242 [U] 94.61
BC:165 [LYS] B5:222 [C] 2.7 B5:226 [G] 82.97
BC:165 [LYS] B5:223 [G] 3.3 82.97
BC:165 [LYS] B5:224 [U] 4.67 82.97
BC:168 [VAL] B5:223 [G] 3.9 42.73
BC:169 [LEU] B5:219 [G] 4.19 24.01
BC:172 [LYS] B5:219 [G] 3.03 45.46
BC:177 [TRP] B5:219 [G] 3.4 0.0
BC:178 [ASN] B5:219 [G] 4.97 24.38
BC:178 [ASN] B5:2143 [A] 3.59 24.38
BC:181 [LYS] B5:2143 [A] 3.57 33.32
BC:182 [LYS] B5:2141 [U] 4.74 B5:2179 [G] 76.5
BC:182 [LYS] B5:2142 [G] 2.42 B5:2178 [C] 76.5
BC:182 [LYS] B5:2143 [A] 3.64 76.5
BC:184 [TYR] B5:223 [G] 4.24 25.21
BC:184 [TYR] B5:226 [G] 2.59 B5:222 [C] base:SC 25.21
BC:185 [ALA] B5:2143 [A] 3.67 39.05
BC:188 [ARG] B5:2141 [U] 2.95 B5:2179 [G] base:SC 40.66
BC:188 [ARG] B5:2142 [G] 3.06 B5:2178 [C] base:SC, base:SC 40.66
BC:188 [ARG] B5:2144 [G] 3.35 B5:2177 [C] base:SC 40.66
BC:188 [ARG] B5:2145 [C] 4.35 B5:2176 [G] 40.66
BC:188 [ARG] B5:2177 [C] 4.49 B5:2144 [G] 40.66
BC:188 [ARG] B5:2178 [C] 4.73 B5:2142 [G] 40.66
BC:189 [MET] B5:234 [G] 4.28 58.01
BC:189 [MET] B5:235 [A] 4.2 B5:200 [U] 58.01
BC:189 [MET] B5:2144 [G] 4.92 B5:2177 [C] 58.01
BC:189 [MET] B5:2176 [G] 4.21 B5:2145 [C] 58.01
BC:189 [MET] B5:2177 [C] 3.01 B5:2144 [G] base:BB 58.01
BC:190 [ARG] B5:2138 [C] 3.26 B5:2182 [G] 94.76
BC:190 [ARG] B5:2139 [G] 2.65 B5:2181 [C] 94.76
BC:190 [ARG] B5:2177 [C] 3.75 B5:2144 [G] 94.76
BC:191 [ALA] B5:2137 [G] 4.72 B5:2183 [C] 75.08
BC:191 [ALA] B5:2138 [C] 4.25 B5:2182 [G] 75.08
BC:191 [ALA] B5:2177 [C] 3.44 B5:2144 [G] 75.08
BC:191 [ALA] B5:2178 [C] 3.35 B5:2142 [G] 75.08
BC:192 [GLY] B5:2137 [G] 3.1 B5:2183 [C] 95.63
BC:192 [GLY] B5:2177 [C] 3.03 B5:2144 [G] 95.63
BC:192 [GLY] B5:2178 [C] 4.98 B5:2142 [G] 95.63
BC:192 [GLY] B8:4829 [C] 4.6 B5:379 [G] 95.63
BC:193 [LYS] B5:352 [G] 3.68 69.22
BC:193 [LYS] B5:2136 [U] 4.83 B5:2184 [A] 69.22
BC:193 [LYS] B5:2137 [G] 2.79 B5:2183 [C] 69.22
BC:193 [LYS] B8:4828 [A] 4.09 B5:380 [U] 69.22
BC:193 [LYS] B8:4829 [C] 4.82 B5:379 [G] 69.22
BC:194 [GLY] B5:2137 [G] 4.23 B5:2183 [C] 92.57
BC:194 [GLY] B5:2138 [C] 3.24 B5:2182 [G] 92.57
BC:195 [LYS] B5:2176 [G] 3.83 B5:2145 [C] 91.47
BC:195 [LYS] B5:2177 [C] 2.6 B5:2144 [G] 91.47
BC:195 [LYS] B8:4828 [A] 4.73 B5:380 [U] 91.47
BC:195 [LYS] B8:4829 [C] 3.0 B5:379 [G] 91.47
BC:196 [MET] B5:352 [G] 3.62 52.19
BC:196 [MET] B8:4829 [C] 3.43 B5:379 [G] 52.19
BC:196 [MET] B8:4830 [U] 3.54 B5:353 [A] 52.19
BC:197 [ARG] B5:348 [G] 4.79 B8:4834 [C] 98.92
BC:197 [ARG] B5:350 [C] 3.08 B8:4833 [G] 98.92
BC:197 [ARG] B5:351 [C] 2.45 B8:4832 [G] base/AA stacks 98.92
BC:197 [ARG] B5:352 [G] 2.78 base:SC, base:SC 98.92
BC:197 [ARG] B5:2137 [G] 4.62 B5:2183 [C] 98.92
BC:198 [ASN] B5:348 [G] 3.04 B8:4834 [C] 91.21
BC:199 [ARG] B5:348 [G] 4.36 B8:4834 [C] 95.99
BC:199 [ARG] B5:349 [A] 3.8 95.99
BC:199 [ARG] B5:350 [C] 2.98 B8:4833 [G] 95.99
BC:199 [ARG] B5:2137 [G] 3.55 B5:2183 [C] 95.99
BC:199 [ARG] B5:2138 [C] 2.85 B5:2182 [G] 95.99
BC:199 [ARG] B5:2139 [G] 4.72 B5:2181 [C] 95.99
BC:200 [ARG] B5:229 [G] 3.16 B5:239 [C] 72.95
BC:200 [ARG] B5:2176 [G] 4.56 B5:2145 [C] 72.95
BC:200 [ARG] B8:4830 [U] 4.58 B5:353 [A] 72.95
BC:201 [ARG] B5:228 [C] 3.4 B5:240 [G] 50.73
BC:201 [ARG] B5:229 [G] 4.61 B5:239 [C] 50.73
BC:201 [ARG] B5:234 [G] 4.81 50.73
BC:201 [ARG] B5:235 [A] 2.74 B5:200 [U] 50.73
BC:201 [ARG] B5:236 [G] 4.73 B5:221 [C] 50.73
BC:203 [GLN] B5:2141 [U] 4.72 B5:2179 [G] 23.8
BC:204 [ARG] B5:2141 [U] 2.79 B5:2179 [G] 71.54
BC:204 [ARG] B5:2142 [G] 2.84 B5:2178 [C] 71.54
BC:205 [ARG] B5:2139 [G] 4.65 B5:2181 [C] 60.21
BC:205 [ARG] B5:2140 [G] 2.64 B5:2180 [C] 60.21
BC:205 [ARG] B5:2141 [U] 3.11 B5:2179 [G] 60.21
BC:219 [LYS] B5:224 [U] 2.92 base:SC 57.4
BC:219 [LYS] B5:225 [G] 4.27 B5:242 [U] 57.4
BC:219 [LYS] B5:244 [G] 4.55 B5:196 [C] 57.4
BC:219 [LYS] B5:245 [C] 4.46 57.4
BC:220 [ALA] B5:224 [U] 4.61 86.6
BC:222 [ARG] B5:224 [U] 3.3 90.13
BC:222 [ARG] B5:225 [G] 2.63 B5:242 [U] 90.13
BC:222 [ARG] B5:227 [A] 4.87 B5:241 [G] 90.13
BC:222 [ARG] B5:243 [A] 3.05 sugar:SC 90.13
BC:222 [ARG] B5:244 [G] 4.54 B5:196 [C] 90.13
BC:223 [ASN] B5:223 [G] 2.71 base:SC 97.9
BC:223 [ASN] B5:225 [G] 3.11 B5:242 [U] 97.9
BC:223 [ASN] B5:226 [G] 2.6 B5:222 [C] sugar:BB 97.9
BC:223 [ASN] B5:227 [A] 4.89 B5:241 [G] 97.9
BC:224 [ILE] B5:223 [G] 4.09 75.21
BC:224 [ILE] B5:226 [G] 4.38 B5:222 [C] 75.21
BC:225 [PRO] B5:223 [G] 4.44 62.01
BC:225 [PRO] B5:226 [G] 3.77 B5:222 [C] 62.01
BC:229 [LEU] B5:1314 [G] 4.96 43.33
BC:230 [LEU] B5:1314 [G] 4.89 18.99
BC:233 [THR] B5:1318 [G] 2.92 B5:1307 [C] sugar:BB 38.59
BC:234 [LYS] B5:1308 [U] 4.88 54.17
BC:234 [LYS] B5:1317 [A] 3.91 54.17
BC:234 [LYS] B5:1318 [G] 4.05 B5:1307 [C] 54.17
BC:235 [LEU] B5:1317 [A] 3.19 sugar:BB 89.09
BC:235 [LEU] B5:1318 [G] 3.6 B5:1307 [C] 89.09
BC:236 [ASN] B5:1316 [A] 3.94 base:SC 83.64
BC:236 [ASN] B5:1317 [A] 3.24 83.64
BC:237 [ILE] B5:1317 [A] 4.72 73.82
BC:238 [LEU] B5:1316 [A] 3.46 70.38
BC:238 [LEU] B5:1317 [A] 4.53 70.38
BC:239 [LYS] B5:1313 [C] 3.59 42.52
BC:239 [LYS] B5:1314 [G] 3.3 42.52
BC:242 [PRO] B5:2139 [G] 4.21 B5:2181 [C] 90.89
BC:242 [PRO] B5:2140 [G] 3.29 B5:2180 [C] 90.89
BC:243 [GLY] B5:2139 [G] 2.78 B5:2181 [C] base:BB, sugar:BB 92.25
BC:243 [GLY] B5:2140 [G] 3.31 B5:2180 [C] 92.25
BC:243 [GLY] B5:2181 [C] 4.83 B5:2139 [G] 92.25
BC:243 [GLY] B5:2182 [G] 4.64 B5:2138 [C] 92.25
BC:244 [GLY] B5:2139 [G] 4.88 B5:2181 [C] 75.77
BC:245 [HIS] B5:2139 [G] 3.36 B5:2181 [C] 71.26
BC:245 [HIS] B5:2140 [G] 3.27 B5:2180 [C] 71.26
BC:245 [HIS] B5:2181 [C] 2.67 B5:2139 [G] base:SC 71.26
BC:245 [HIS] B5:2182 [G] 4.64 B5:2138 [C] 71.26
BC:267 [TRP] B5:493 [U] 3.34 0.16
BC:268 [ARG] B5:493 [U] 3.81 6.54
BC:268 [ARG] B5:495 [C] 4.22 B5:654 [G] 6.54
BC:268 [ARG] B5:648 [C] 3.07 B5:506 [G] 6.54
BC:268 [ARG] B5:649 [C] 3.47 B5:501 [G] 6.54
BC:269 [LYS] B5:648 [C] 3.25 B5:506 [G] 0.29
BC:269 [LYS] B5:649 [C] 4.17 B5:501 [G] 0.29
BC:273 [LEU] B5:1319 [C] 4.27 B5:1306 [G] 3.9
BC:273 [LEU] B5:1320 [C] 4.36 B5:1305 [G] 3.9
BC:274 [LYS] B5:1318 [G] 4.93 B5:1307 [C] 77.52
BC:274 [LYS] B5:1319 [C] 3.24 B5:1306 [G] 77.52
BC:274 [LYS] B5:1320 [C] 3.46 B5:1305 [G] 77.52
BC:275 [SER] B5:1319 [C] 4.98 B5:1306 [G] 15.41
BC:275 [SER] B5:1320 [C] 2.68 B5:1305 [G] 15.41
BC:275 [SER] B5:1321 [G] 3.85 B5:1302 [G] 15.41
BC:276 [ASN] B5:1320 [C] 4.98 B5:1305 [G] 50.26
BC:280 [PRO] B5:493 [U] 4.54 67.34
BC:280 [PRO] B5:1296 [C] 4.43 B5:1459 [G] 67.34
BC:281 [MET] B5:493 [U] 3.35 46.75
BC:281 [MET] B5:1296 [C] 4.87 B5:1459 [G] 46.75
BC:282 [HIS] B5:493 [U] 2.97 base:BB 43.58
BC:282 [HIS] B5:661 [A] 3.47 43.58
BC:285 [LEU] B5:493 [U] 3.67 53.78
BC:286 [ASN] B5:661 [A] 4.9 69.26
BC:288 [ASP] B5:660 [G] 4.57 91.75
BC:288 [ASP] B5:661 [A] 4.55 91.75
BC:289 [LEU] B5:2027 [A] 4.4 52.98
BC:290 [SER] B5:660 [G] 4.51 47.16
BC:291 [ARG] B5:659 [C] 3.92 B5:489 [G] 77.71
BC:291 [ARG] B5:660 [G] 2.68 sugar:SC base/AA stacks 77.71
BC:293 [LEU] B5:2027 [A] 3.47 76.36
BC:293 [LEU] B5:2028 [G] 4.66 76.36
BC:294 [LYS] B5:2027 [A] 4.22 67.5
BC:294 [LYS] B5:2028 [G] 2.62 67.5
BC:299 [GLN] B5:2027 [A] 4.68 82.78
BC:299 [GLN] B5:2028 [G] 3.0 82.78
BC:303 [ARG] B5:2025 [G] 3.39 B5:2114 [C] 57.74
BC:303 [ARG] B5:2026 [C] 2.72 B5:2113 [G] 57.74
BC:304 [ALA] B5:2026 [C] 4.43 B5:2113 [G] 33.51
BC:304 [ALA] B5:2028 [G] 4.74 33.51
BC:304 [ALA] B5:2038 [C] 3.32 33.51
BC:305 [PRO] B5:2026 [C] 3.26 B5:2113 [G] 38.2
BC:305 [PRO] B5:2027 [A] 4.03 38.2
BC:305 [PRO] B5:2028 [G] 3.51 38.2
BC:305 [PRO] B5:2038 [C] 3.34 38.2
BC:306 [ARG] B5:2025 [G] 2.85 B5:2114 [C] sugar:BB 41.39
BC:306 [ARG] B5:2026 [C] 2.76 B5:2113 [G] 41.39
BC:306 [ARG] B5:2038 [C] 3.43 41.39
BC:306 [ARG] B5:2039 [G] 3.32 41.39
BC:307 [LYS] B5:2025 [G] 4.6 B5:2114 [C] 18.23
BC:307 [LYS] B5:2026 [C] 4.42 B5:2113 [G] 18.23
BC:307 [LYS] B5:2028 [G] 2.44 sugar:SC 18.23
BC:307 [LYS] B5:2029 [U] 3.93 18.23
BC:307 [LYS] B5:2037 [G] 4.83 18.23
BC:307 [LYS] B5:2038 [C] 4.16 18.23
BC:308 [LYS] B5:861 [G] 4.31 B5:871 [U] 2.43
BC:308 [LYS] B5:2038 [C] 3.76 2.43
BC:308 [LYS] B5:2039 [G] 2.95 sugar:SC 2.43
BC:309 [ILE] B5:860 [A] 4.95 7.06
BC:309 [ILE] B5:2115 [C] 3.92 B5:2024 [G] 7.06
BC:309 [ILE] B5:2116 [G] 3.7 B5:2022 [C] 7.06
BC:310 [HIS] B5:2039 [G] 3.05 base/AA stacks 15.09
BC:310 [HIS] B5:2116 [G] 2.76 B5:2022 [C] sugar:BB 15.09
BC:310 [HIS] B5:2117 [C] 3.6 B5:2021 [G] 15.09
BC:311 [ARG] B5:857 [G] 3.47 11.93
BC:311 [ARG] B5:858 [G] 3.69 11.93
BC:311 [ARG] B5:859 [G] 3.75 11.93
BC:311 [ARG] B5:2115 [C] 4.66 B5:2024 [G] 11.93
BC:311 [ARG] B5:2116 [G] 3.5 B5:2022 [C] 11.93
BC:311 [ARG] B5:2117 [C] 3.35 B5:2021 [G] 11.93
BC:312 [ARG] B5:1226 [G] 4.77 B5:874 [C] 0.73
BC:312 [ARG] B5:1227 [G] 3.16 0.73
BC:312 [ARG] B5:2013 [C] 4.95 B5:1841 [G] 0.73
BC:312 [ARG] B5:2014 [G] 2.58 B5:1840 [C] 0.73
BC:312 [ARG] B5:2015 [G] 2.64 B5:1839 [C] 0.73
BC:312 [ARG] B5:2116 [G] 4.23 B5:2022 [C] 0.73
BC:312 [ARG] B5:2117 [C] 2.55 B5:2021 [G] 0.73
BC:312 [ARG] B5:2118 [G] 3.63 B5:2020 [C] 0.73
BC:313 [VAL] B5:1226 [G] 3.68 B5:874 [C] 3.92
BC:314 [LEU] B5:708 [G] 4.24 B5:854 [C] 4.76
BC:314 [LEU] B5:709 [G] 3.82 B5:853 [C] 4.76
BC:314 [LEU] B5:1226 [G] 5.0 B5:874 [C] 4.76
BC:314 [LEU] B5:1227 [G] 3.28 4.76
BC:315 [LYS] B5:709 [G] 3.82 B5:853 [C] 65.27
BC:315 [LYS] B5:710 [C] 4.1 B5:852 [G] 65.27
BC:316 [LYS] B5:708 [G] 3.52 B5:854 [C] sugar:SC 44.0
BC:316 [LYS] B5:709 [G] 3.59 B5:853 [C] 44.0
BC:316 [LYS] B5:710 [C] 4.47 B5:852 [G] 44.0
BC:316 [LYS] B5:1225 [G] 2.7 B5:876 [C] 44.0
BC:316 [LYS] B5:1226 [G] 3.04 B5:874 [C] 44.0
BC:317 [ASN] B5:709 [G] 4.7 B5:853 [C] 86.47
BC:317 [ASN] B5:710 [C] 3.34 B5:852 [G] 86.47
BC:320 [LYS] B5:710 [C] 3.02 B5:852 [G] 62.37
BC:320 [LYS] B5:711 [U] 4.03 B5:851 [G] 62.37
BC:320 [LYS] B5:1224 [C] 3.32 base:BB 62.37
BC:321 [ASN] B5:708 [G] 3.77 B5:854 [C] 84.22
BC:321 [ASN] B5:709 [G] 2.81 B5:853 [C] 84.22
BC:321 [ASN] B5:1224 [C] 2.22 84.22
BC:321 [ASN] B5:1225 [G] 2.81 B5:876 [C] 84.22
BC:322 [LEU] B5:1224 [C] 3.06 base:BB 3.74
BC:323 [ARG] B5:877 [C] 2.87 B5:1223 [A] base:SC, base:SC, base:SC, sugar:BB 2.46
BC:323 [ARG] B5:878 [G] 3.37 B5:1222 [C] base/AA stacks 2.46
BC:323 [ARG] B5:1223 [A] 3.03 B5:877 [C] base:SC 2.46
BC:323 [ARG] B5:1224 [C] 2.78 sugar:BB 2.46
BC:323 [ARG] B5:1225 [G] 3.42 B5:876 [C] base/AA stacks 2.46
BC:324 [ILE] B5:1224 [C] 4.22 45.03
BC:324 [ILE] B5:1225 [G] 3.67 B5:876 [C] 45.03
BC:324 [ILE] B5:1226 [G] 4.21 B5:874 [C] 45.03
BC:326 [LEU] B5:877 [C] 3.69 B5:1223 [A] 2.88
BC:326 [LEU] B5:878 [G] 3.65 B5:1222 [C] 2.88
BC:327 [LYS] B5:876 [C] 3.61 B5:1225 [G] 64.91
BC:327 [LYS] B5:877 [C] 3.43 B5:1223 [A] 64.91
BC:327 [LYS] B5:1225 [G] 4.52 B5:876 [C] 64.91
BC:330 [PRO] B5:878 [G] 4.2 B5:1222 [C] 86.24
BC:330 [PRO] B5:1124 [A] 3.42 86.24
BC:333 [LYS] B5:878 [G] 2.56 B5:1222 [C] sugar:SC 15.2
BC:333 [LYS] B5:879 [C] 2.62 B5:1221 [G] 15.2
BC:334 [THR] B5:1123 [C] 4.79 B5:989 [G] 38.48
BC:335 [MET] B5:843 [A] 3.53 23.02
BC:335 [MET] B5:846 [C] 3.82 B5:716 [G] 23.02
BC:336 [ARG] B5:846 [C] 3.9 B5:716 [G] 49.28
BC:336 [ARG] B5:847 [C] 3.29 B5:715 [G] 49.28
BC:337 [ARG] B5:1123 [C] 4.09 B5:989 [G] 50.1
BC:338 [ASN] B5:1122 [C] 4.97 B5:990 [G] 34.13
BC:338 [ASN] B5:1123 [C] 4.43 B5:989 [G] 34.13
BC:339 [THR] B5:845 [U] 3.46 B5:717 [A] 16.03
BC:339 [THR] B5:846 [C] 2.77 B5:716 [G] 16.03
BC:340 [ILE] B5:846 [C] 3.35 B5:716 [G] 0.6
BC:340 [ILE] B5:847 [C] 4.1 B5:715 [G] 0.6
BC:341 [LEU] B5:1122 [C] 4.75 B5:990 [G] 7.95
BC:342 [ARG] B5:718 [C] 4.82 B5:842 [G] 1.83
BC:342 [ARG] B5:844 [A] 4.68 1.83
BC:342 [ARG] B5:845 [U] 2.92 B5:717 [A] 1.83
BC:343 [GLN] B5:717 [A] 4.4 B5:845 [U] 16.77
BC:343 [GLN] B5:718 [C] 3.68 B5:842 [G] base/AA stacks 16.77
BC:343 [GLN] B5:842 [G] 4.77 B5:718 [C] 16.77
BC:343 [GLN] B5:845 [U] 2.87 B5:717 [A] base:SC 16.77
BC:343 [GLN] B5:846 [C] 3.37 B5:716 [G] 16.77
BC:346 [ASN] B5:718 [C] 3.16 B5:842 [G] sugar:SC 28.33
BC:346 [ASN] B5:719 [G] 3.46 B5:841 [C] 28.33
BC:347 [HIS] B5:717 [A] 3.01 B5:845 [U] 17.26
BC:347 [HIS] B5:718 [C] 3.26 B5:842 [G] 17.26
BC:350 [ARG] B5:718 [C] 3.17 B5:842 [G] 35.29
BC:350 [ARG] B5:719 [G] 3.56 B5:841 [C] 35.29
BC:350 [ARG] B5:830 [C] 2.98 35.29
BC:353 [ARG] B5:829 [G] 3.41 B5:832 [G] 45.0
BC:353 [ARG] B5:830 [C] 2.74 45.0
BC:357 [ALA] B5:828 [A] 4.26 B5:728 [G] 77.66
BC:357 [ALA] B5:829 [G] 3.89 B5:832 [G] 77.66
BC:361 [LYS] B5:828 [A] 4.82 B5:728 [G] 67.3

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group126 7O7Y_BC_B5,B8 BC: 60s ribosomal protein l4, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) B8: 5.8s rRNA, Oryctolagus cuniculus (natural) G1SVW5 C-terminal helical region in 60S ribosomal protein L4 (L4p) & Ribosomal protein L4 Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_E_A 7O7Y_BC_B5,B8 0.67 0.9 2.36 0.24 Ribosomal protein L4 compare
4Y4O_1F_1A 7O7Y_BC_B5,B8 0.58 0.9 2.36 0.2 Ribosomal protein L4 compare
1VQ8_C_0 7O7Y_BC_B5,B8 0.72 0.94 1.41 0.29 Ribosomal protein L4 compare
1YHQ_C_0 7O7Y_BC_B5,B8 0.73 0.94 1.36 0.3 Ribosomal protein L4 compare
6AZ3_C_1,7 7O7Y_BC_B5,B8 0.68 0.92 2.2 0.44 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
3CC2_C_0 7O7Y_BC_B5,B8 0.73 0.94 1.35 0.3 Ribosomal protein L4 compare
7K00_e_a 7O7Y_BC_B5,B8 0.58 0.9 2.31 0.22 Ribosomal protein L4 compare