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All interfaces > All interologs > Interface groups > group127 > 1YHQ_L_0 vs 6AZ3_L_2

Interface analysis


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Common contacts -

1YHQ_L
1YHQ_0
6AZ3_L
6AZ3_2
Conserved?
L:51 [PHE] 0:2440 [C] L:58 [MET] 2:1213 [A] ✔
L:51 [PHE] 0:2441 [U] L:58 [MET] 2:1214 [U] ✔
L:51 [PHE] 0:2452 [G] L:58 [MET] 2:1225 [U] ✔
L:51 [PHE] 0:2453 [G] L:58 [MET] 2:1226 [A] ✔
L:56 [LYS] 0:2444 [U] L:64 [LYS] 2:1217 [A] ✔
L:48 [LYS] 0:2430 [A] L:55 [LYS] 2:1191 [U] ✔
L:48 [LYS] 0:2431 [C] L:55 [LYS] 2:1192 [C] ✔
L:48 [LYS] 0:2432 [C] L:55 [LYS] 2:1193 [C] ✔
L:48 [LYS] 0:2454 [C] L:55 [LYS] 2:1227 [C] ✔
L:50 [GLY] 0:2453 [G] L:57 [GLY] 2:1226 [A] ✔
L:50 [GLY] 0:2454 [C] L:57 [GLY] 2:1227 [C] ✔
L:40 [PHE] 0:2465 [A] L:42 [ARG] 2:1238 [A] ✔
L:37 [LYS] 0:2467 [A] L:39 [HIS] 2:1240 [A] ✔
L:49 [SER] 0:2453 [G] L:56 [LEU] 2:1226 [A] ✔
L:49 [SER] 0:2454 [C] L:56 [LEU] 2:1227 [C] ✔
L:46 [LEU] 0:2430 [A] L:53 [PHE] 2:1191 [U] ✔
L:54 [PRO] 0:2443 [C] L:61 [TYR] 2:1216 [A] ✔
L:47 [GLY] 0:2430 [A] L:54 [GLY] 2:1191 [U] ✔
L:47 [GLY] 0:2431 [C] L:54 [GLY] 2:1192 [C] ✔
L:56 [LYS] 0:2443 [C] L:64 [LYS] 2:1216 [A] ❌ 6AZ3_L_2
L:48 [LYS] 0:2453 [G] L:55 [LYS] 2:1226 [A] ❌ 6AZ3_L_2
L:50 [GLY] 0:2452 [G] L:57 [GLY] 2:1225 [U] ❌ 6AZ3_L_2
L:37 [LYS] 0:2466 [G] L:39 [HIS] 2:1239 [G] ❌ 6AZ3_L_2
L:53 [ARG] 0:2441 [U] L:60 [HIS] 2:1214 [U] ❌ 6AZ3_L_2
L:46 [LEU] 0:2429 [A] L:53 [PHE] 2:1190 [A] ❌ 6AZ3_L_2
L:36 [ASP] 0:2466 [G] L:38 [MET] 2:1239 [G] ❌ 6AZ3_L_2
L:36 [ASP] 0:2430 [A] L:38 [MET] 2:1191 [U] ❌ 1YHQ_L_0
L:36 [ASP] 0:2465 [A] L:38 [MET] 2:1238 [A] ❌ 1YHQ_L_0
L:36 [ASP] 0:2429 [A] L:38 [MET] 2:1190 [A] ❌ 1YHQ_L_0
L:40 [PHE] 0:2429 [A] L:42 [ARG] 2:1190 [A] ❌ 1YHQ_L_0
L:40 [PHE] 0:2466 [G] L:42 [ARG] 2:1239 [G] ❌ 1YHQ_L_0
L:51 [PHE] 0:2443 [C] L:58 [MET] 2:1216 [A] ❌ 1YHQ_L_0
L:52 [LYS] 0:2443 [C] L:59 [ASP] 2:1216 [A] ❌ 1YHQ_L_0
L:53 [ARG] 0:2443 [C] L:60 [HIS] 2:1216 [A] ❌ 1YHQ_L_0
L:19 [LYS] 0:2483 [A] L:23 [GLY] 2:1256 [A] ❌ 6AZ3_L:23, 6AZ3_2:1256 no longer at interface
L:40 [PHE] 0:2396 [C] L:42 [ARG] 2:1158 [U] ❌ 6AZ3_2:1158 no longer at interface
L:53 [ARG] 0:2442 [G] L:60 [HIS] 2:1215 [G] ❌ 6AZ3_2:1215 no longer at interface
L:41 [HIS] 0:2396 [C] L:43 [ILE] 2:1158 [U] ❌ 6AZ3_2:1158 no longer at interface
L:57 [VAL] 0:2442 [G] L:65 [LYS] 2:1215 [G] ❌ 6AZ3_L:65, 6AZ3_2:1215 no longer at interface
L:54 [PRO] 0:2442 [G] L:61 [TYR] 2:1215 [G] ❌ 6AZ3_2:1215 no longer at interface
L:41 [HIS] 0:2394 [A] L:43 [ILE] 2:1156 [A] ❌ 1YHQ_0:2394 no longer at interface
L:57 [VAL] 0:2443 [C] L:65 [LYS] 2:1216 [A] ❌ 6AZ3_L:65 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins L15p and L18e 0.82 2.32 0.27 0.73 0.81 0.93 0.93 0.48 0.31 0.62 0.35


Other pairs involving 1YHQ_L_0 or 6AZ3_L_2

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_L_0 4Y4O_1P_1A 0.38 0.93 4.07 0.15 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6AZ3_L_2 0.48 0.82 2.32 0.27 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6AZ3_L_1 0.63 0.77 2.67 0.34 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6S0Z_J_A 0.41 0.93 4.03 0.15 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 7O7Y_Ba_B5 0.62 0.93 2.36 0.35 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 7RYG_K_A 0.38 0.91 4.41 0.15 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 6AZ3_L_2 0.48 0.82 2.4 0.27 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 1YHQ_L_0 0.99 1.0 0.24 0.98 Ribosomal proteins L15p and L18e Archaeal large subunit ribosomal RNA compare
4Y4O_1P_1A 6AZ3_L_2 0.29 0.83 5.19 0.0 Ribosomal proteins L15p and L18e compare
6AZ3_L_2 7O7Y_Ba_B5 0.97 0.91 0.6 0.67 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
6AZ3_L_2 6S0Z_J_A 0.29 0.81 5.35 0.13 Ribosomal proteins L15p and L18e compare