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All interfaces > All interologs > Interface groups > group127 > 4Y4O_1P_1A vs 6AZ3_L_2

Interface analysis


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Common contacts -

4Y4O_1P
4Y4O_1A
6AZ3_L
6AZ3_2
Conserved?
1P:73 [GLY] 1A:2418 [U] L:62 [HIS] 2:1216 [A] ✔
1P:67 [MET] 1A:2427 [G] L:57 [GLY] 2:1226 [A] ✔
1P:64 [LYS] 1A:2405 [A] L:54 [GLY] 2:1191 [U] ✔
1P:64 [LYS] 1A:2406 [C] L:54 [GLY] 2:1192 [C] ✔
1P:63 [PRO] 1A:2405 [A] L:53 [PHE] 2:1191 [U] ✔
1P:70 [GLN] 1A:2418 [U] L:60 [HIS] 2:1216 [A] ✔
1P:72 [PRO] 1A:2418 [U] L:61 [TYR] 2:1216 [A] ✔
1P:65 [ARG] 1A:2428 [C] L:55 [LYS] 2:1227 [C] ✔
1P:66 [GLY] 1A:2427 [G] L:56 [LEU] 2:1226 [A] ✔
1P:66 [GLY] 1A:2428 [C] L:56 [LEU] 2:1227 [C] ✔
1P:67 [MET] 1A:2415 [C] L:57 [GLY] 2:1213 [A] ❌ 6AZ3_L_2
1P:67 [MET] 1A:2416 [C] L:57 [GLY] 2:1214 [U] ❌ 6AZ3_L_2
1P:67 [MET] 1A:2426 [G] L:57 [GLY] 2:1225 [U] ❌ 6AZ3_L_2
1P:64 [LYS] 1A:2407 [C] L:54 [GLY] 2:1193 [C] ❌ 6AZ3_L_2
1P:64 [LYS] 1A:2428 [C] L:54 [GLY] 2:1227 [C] ❌ 6AZ3_L_2
1P:63 [PRO] 1A:2406 [C] L:53 [PHE] 2:1192 [C] ❌ 6AZ3_L_2
1P:70 [GLN] 1A:2426 [G] L:60 [HIS] 2:1225 [U] ❌ 6AZ3_L_2
1P:65 [ARG] 1A:2427 [G] L:55 [LYS] 2:1226 [A] ❌ 6AZ3_L_2
1P:75 [ILE] 1A:2416 [C] L:64 [LYS] 2:1214 [U] ❌ 6AZ3_L_2
1P:75 [ILE] 1A:2418 [U] L:64 [LYS] 2:1216 [A] ❌ 6AZ3_L_2
1P:53 [GLY] 1A:2405 [A] L:38 [MET] 2:1191 [U] ❌ 4Y4O_1P_1A
1P:53 [GLY] 1A:2440 [G] L:38 [MET] 2:1238 [A] ❌ 4Y4O_1P_1A
1P:53 [GLY] 1A:2404 [A] L:38 [MET] 2:1190 [A] ❌ 4Y4O_1P_1A
1P:58 [THR] 1A:2370 [G] L:43 [ILE] 2:1156 [A] ❌ 4Y4O_1P_1A
1P:65 [ARG] 1A:2405 [A] L:55 [LYS] 2:1191 [U] ❌ 4Y4O_1P_1A
1P:65 [ARG] 1A:2407 [C] L:55 [LYS] 2:1193 [C] ❌ 4Y4O_1P_1A
1P:65 [ARG] 1A:2406 [C] L:55 [LYS] 2:1192 [C] ❌ 4Y4O_1P_1A
1P:67 [MET] 1A:2428 [C] L:57 [GLY] 2:1227 [C] ❌ 4Y4O_1P_1A
1P:68 [GLN] 1A:2416 [C] L:58 [MET] 2:1214 [U] ❌ 4Y4O_1P_1A
1P:68 [GLN] 1A:2426 [G] L:58 [MET] 2:1225 [U] ❌ 4Y4O_1P_1A
1P:68 [GLN] 1A:2418 [U] L:58 [MET] 2:1216 [A] ❌ 4Y4O_1P_1A
1P:68 [GLN] 1A:2427 [G] L:58 [MET] 2:1226 [A] ❌ 4Y4O_1P_1A
1P:68 [GLN] 1A:2415 [C] L:58 [MET] 2:1213 [A] ❌ 4Y4O_1P_1A
1P:69 [GLY] 1A:2418 [U] L:59 [ASP] 2:1216 [A] ❌ 4Y4O_1P_1A
1P:77 [ARG] 1A:2417 [G] L:67 [PRO] 2:1215 [G] ❌ 6AZ3_L:67, 6AZ3_2:1215 no longer at interface
1P:70 [GLN] 1A:2425 [G] L:60 [HIS] 2:1224 [A] ❌ 6AZ3_2:1224 no longer at interface
1P:58 [THR] 1A:2371 [C] L:43 [ILE] 2:1158 [U] ❌ 6AZ3_2:1158 no longer at interface
1P:58 [THR] 1A:2372 [A] L:43 [ILE] 2:1159 [A] ❌ 6AZ3_2:1159 no longer at interface
1P:62 [LEU] 1A:2372 [A] L:51 [GLY] 2:1159 [A] ❌ 6AZ3_L:51, 6AZ3_2:1159 no longer at interface
1P:36 [LYS] 1A:2460 [A] L:22 [VAL] 2:1256 [A] ❌ 6AZ3_L:22, 6AZ3_2:1256 no longer at interface
1P:65 [ARG] 1A:2429 [C] L:55 [LYS] 2:1228 [C] ❌ 6AZ3_2:1228 no longer at interface
1P:75 [ILE] 1A:2417 [G] L:64 [LYS] 2:1215 [G] ❌ 6AZ3_2:1215 no longer at interface
1P:54 [GLY] 1A:2442 [A] L:39 [HIS] 2:1240 [A] ❌ 4Y4O_1A:2442 no longer at interface
1P:75 [ILE] 1A:2419 [G] L:64 [LYS] 2:1217 [A] ❌ 4Y4O_1A:2419 no longer at interface
1P:77 [ARG] 1A:2416 [C] L:67 [PRO] 2:1214 [U] ❌ 6AZ3_L:67 no longer at interface
1P:74 [GLU] 1A:2418 [U] L:63 [ARG] 2:1216 [A] ❌ 6AZ3_L:63 no longer at interface
1P:56 [SER] 1A:2404 [A] L:41 [HIS] 2:1190 [A] ❌ 6AZ3_L:41 no longer at interface
1P:56 [SER] 1A:2440 [G] L:41 [HIS] 2:1238 [A] ❌ 6AZ3_L:41 no longer at interface
1P:56 [SER] 1A:2441 [G] L:41 [HIS] 2:1239 [G] ❌ 6AZ3_L:41 no longer at interface
1P:55 [ARG] 1A:2370 [G] L:40 [HIS] 2:1156 [A] ❌ 6AZ3_L:40 no longer at interface
1P:55 [ARG] 1A:2440 [G] L:40 [HIS] 2:1238 [A] ❌ 6AZ3_L:40 no longer at interface
1P:60 [MET] 1A:2404 [A] L:46 [ASP] 2:1190 [A] ❌ 6AZ3_L:46 no longer at interface
1P:60 [MET] 1A:2405 [A] L:46 [ASP] 2:1191 [U] ❌ 6AZ3_L:46 no longer at interface
1P:62 [LEU] 1A:2404 [A] L:51 [GLY] 2:1190 [A] ❌ 6AZ3_L:51 no longer at interface
1P:62 [LEU] 1A:2405 [A] L:51 [GLY] 2:1191 [U] ❌ 6AZ3_L:51 no longer at interface
1P:62 [LEU] 1A:2406 [C] L:51 [GLY] 2:1192 [C] ❌ 6AZ3_L:51 no longer at interface
1P:52 [GLU] 1A:2370 [G] L:37 [GLY] 2:1156 [A] ❌ 6AZ3_L:37 no longer at interface
1P:57 [THR] 1A:2440 [G] L:42 [ARG] 2:1238 [A] ❌ 4Y4O_1P:57 no longer at interface
1P:57 [THR] 1A:2404 [A] L:42 [ARG] 2:1190 [A] ❌ 4Y4O_1P:57 no longer at interface
1P:57 [THR] 1A:2441 [G] L:42 [ARG] 2:1239 [G] ❌ 4Y4O_1P:57 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins L15p and L18e 0.83 5.19 0.00 0.63 0.83 0.93 0.87 0.29 0.19 0.00 0.52


Other pairs involving 4Y4O_1P_1A or 6AZ3_L_2

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_L_0 4Y4O_1P_1A 0.38 0.93 4.07 0.15 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 4Y4O_1P_1A 0.38 0.93 4.18 0.15 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6AZ3_L_1 0.43 0.71 3.9 0.19 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6AZ3_L_2 0.48 0.82 2.32 0.27 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 6AZ3_L_2 0.48 0.82 2.4 0.27 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6AZ3_L_2 0.29 0.83 5.19 0.0 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6S0Z_J_A 0.72 0.96 2.46 0.46 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
6AZ3_L_2 6S0Z_J_A 0.29 0.81 5.35 0.13 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 7K00_k_a 0.76 0.96 2.47 0.5 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
6AZ3_L_2 7O7Y_Ba_B5 0.97 0.91 0.6 0.67 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
4Y4O_1P_1A 7OF0_M_A 0.69 0.89 2.15 0.33 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
4Y4O_1P_1A 7RYG_K_A 0.71 0.96 2.76 0.39 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare