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All interfaces > All interologs > Interface groups > group127 > 6AZ3_L_2 vs 6S0Z_J_A

Interface analysis


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Common contacts -

6AZ3_L
6AZ3_2
6S0Z_J
6S0Z_A
Conserved?
L:55 [LYS] 2:1191 [U] J:63 [LYS] A:2420 [U] ✔
L:55 [LYS] 2:1192 [C] J:63 [LYS] A:2421 [C] ✔
L:55 [LYS] 2:1193 [C] J:63 [LYS] A:2422 [C] ✔
L:55 [LYS] 2:1227 [C] J:63 [LYS] A:2443 [C] ✔
L:57 [GLY] 2:1226 [A] J:65 [GLY] A:2442 [G] ✔
L:57 [GLY] 2:1227 [C] J:65 [GLY] A:2443 [C] ✔
L:58 [MET] 2:1213 [A] J:66 [PHE] A:2430 [C] ✔
L:58 [MET] 2:1214 [U] J:66 [PHE] A:2431 [C] ✔
L:58 [MET] 2:1225 [U] J:66 [PHE] A:2441 [G] ✔
L:58 [MET] 2:1226 [A] J:66 [PHE] A:2442 [G] ✔
L:53 [PHE] 2:1191 [U] J:61 [LEU] A:2420 [U] ✔
L:54 [GLY] 2:1191 [U] J:62 [PRO] A:2420 [U] ✔
L:54 [GLY] 2:1192 [C] J:62 [PRO] A:2421 [C] ✔
L:56 [LEU] 2:1226 [A] J:64 [ARG] A:2442 [G] ✔
L:56 [LEU] 2:1227 [C] J:64 [ARG] A:2443 [C] ✔
L:59 [ASP] 2:1216 [A] J:67 [THR] A:2433 [C] ❌ 6S0Z_J_A
L:58 [MET] 2:1216 [A] J:66 [PHE] A:2433 [C] ❌ 6S0Z_J_A
L:38 [MET] 2:1190 [A] J:52 [GLY] A:2419 [A] ❌ 6S0Z_J_A
L:38 [MET] 2:1191 [U] J:52 [GLY] A:2420 [U] ❌ 6S0Z_J_A
L:38 [MET] 2:1238 [A] J:52 [GLY] A:2455 [G] ❌ 6S0Z_J_A
L:60 [HIS] 2:1216 [A] J:68 [ASN] A:2433 [C] ❌ 6S0Z_J_A
L:39 [HIS] 2:1238 [A] J:53 [GLY] A:2455 [G] ❌ 6AZ3_L_2
L:53 [PHE] 2:1192 [C] J:61 [LEU] A:2421 [C] ❌ 6AZ3_L_2
L:60 [HIS] 2:1214 [U] J:68 [ASN] A:2431 [C] ❌ 6AZ3_L_2
L:39 [HIS] 2:1240 [A] J:53 [GLY] A:2457 [A] ❌ 6S0Z_A:2457 no longer at interface
L:22 [VAL] 2:1256 [A] J:36 [LYS] A:2475 [A] ❌ 6AZ3_L:22, 6AZ3_2:1256 no longer at interface
L:40 [HIS] 2:1158 [U] J:54 [GLN] A:2386 [C] ❌ 6AZ3_L:40, 6AZ3_2:1158 no longer at interface
L:46 [ASP] 2:1159 [A] J:57 [LEU] A:2387 [A] ❌ 6AZ3_L:46, 6AZ3_2:1159 no longer at interface
L:46 [ASP] 2:1158 [U] J:57 [LEU] A:2386 [C] ❌ 6AZ3_L:46, 6AZ3_2:1158 no longer at interface
L:52 [TYR] 2:1158 [U] J:60 [ARG] A:2386 [C] ❌ 6AZ3_L:52, 6AZ3_2:1158 no longer at interface
L:52 [TYR] 2:1159 [A] J:60 [ARG] A:2387 [A] ❌ 6AZ3_L:52, 6AZ3_2:1159 no longer at interface
L:53 [PHE] 2:1159 [A] J:61 [LEU] A:2387 [A] ❌ 6AZ3_2:1159 no longer at interface
L:56 [LEU] 2:1228 [C] J:64 [ARG] A:2444 [C] ❌ 6AZ3_2:1228 no longer at interface
L:60 [HIS] 2:1215 [G] J:68 [ASN] A:2432 [G] ❌ 6AZ3_2:1215 no longer at interface
L:67 [PRO] 2:1215 [G] J:70 [ASN] A:2432 [G] ❌ 6AZ3_L:67, 6AZ3_2:1215 no longer at interface
L:42 [ARG] 2:1190 [A] J:56 [PRO] A:2419 [A] ❌ 6S0Z_J:56 no longer at interface
L:42 [ARG] 2:1238 [A] J:56 [PRO] A:2455 [G] ❌ 6S0Z_J:56 no longer at interface
L:42 [ARG] 2:1239 [G] J:56 [PRO] A:2456 [G] ❌ 6S0Z_J:56 no longer at interface
L:40 [HIS] 2:1238 [A] J:54 [GLN] A:2455 [G] ❌ 6AZ3_L:40 no longer at interface
L:40 [HIS] 2:1156 [A] J:54 [GLN] A:2385 [A] ❌ 6AZ3_L:40 no longer at interface
L:41 [HIS] 2:1239 [G] J:55 [LEU] A:2456 [G] ❌ 6AZ3_L:41 no longer at interface
L:41 [HIS] 2:1238 [A] J:55 [LEU] A:2455 [G] ❌ 6AZ3_L:41 no longer at interface
L:41 [HIS] 2:1190 [A] J:55 [LEU] A:2419 [A] ❌ 6AZ3_L:41 no longer at interface
L:51 [GLY] 2:1192 [C] J:59 [ARG] A:2421 [C] ❌ 6AZ3_L:51 no longer at interface
L:51 [GLY] 2:1190 [A] J:59 [ARG] A:2419 [A] ❌ 6AZ3_L:51 no longer at interface
L:51 [GLY] 2:1191 [U] J:59 [ARG] A:2420 [U] ❌ 6AZ3_L:51 no longer at interface
L:52 [TYR] 2:1239 [G] J:60 [ARG] A:2456 [G] ❌ 6AZ3_L:52 no longer at interface
L:52 [TYR] 2:1238 [A] J:60 [ARG] A:2455 [G] ❌ 6AZ3_L:52 no longer at interface
L:52 [TYR] 2:1190 [A] J:60 [ARG] A:2419 [A] ❌ 6AZ3_L:52 no longer at interface
L:52 [TYR] 2:1191 [U] J:60 [ARG] A:2420 [U] ❌ 6AZ3_L:52 no longer at interface
L:67 [PRO] 2:1214 [U] J:70 [ASN] A:2431 [C] ❌ 6AZ3_L:67 no longer at interface
L:67 [PRO] 2:1216 [A] J:70 [ASN] A:2433 [C] ❌ 6AZ3_L:67 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins L15p and L18e 0.81 5.35 0.13 0.62 0.82 0.67 0.87 0.29 0.28 0.20 0.76


Other pairs involving 6AZ3_L_2 or 6S0Z_J_A

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_L_0 6AZ3_L_2 0.48 0.82 2.32 0.27 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 6AZ3_L_2 0.48 0.82 2.4 0.27 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6AZ3_L_2 0.29 0.83 5.19 0.0 Ribosomal proteins L15p and L18e compare
6AZ3_L_1 6S0Z_J_A 0.36 0.72 4.24 0.11 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6S0Z_J_A 0.41 0.93 4.03 0.15 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 6S0Z_J_A 0.41 0.93 4.07 0.15 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6S0Z_J_A 0.72 0.96 2.46 0.46 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
6AZ3_L_2 6S0Z_J_A 0.29 0.81 5.35 0.13 Ribosomal proteins L15p and L18e compare
6S0Z_J_A 7K00_k_a 0.81 0.97 1.67 0.52 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
6S0Z_J_A 7O7Y_Ba_B5 0.38 0.88 4.38 0.11 Ribosomal proteins L15p and L18e compare
6AZ3_L_2 7O7Y_Ba_B5 0.97 0.91 0.6 0.67 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
6S0Z_J_A 7OF0_M_A 0.78 0.88 2.04 0.38 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare
6S0Z_J_A 7RYG_K_A 0.78 0.97 1.41 0.47 Ribosomal proteins L15p and L18e Bacterial large subunit ribosomal RNA compare