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All interfaces > All interologs > Interface groups > group127 > 6AZ3_L_2 vs 7O7Y_Ba_B5

Interface analysis


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Common contacts -

6AZ3_L
6AZ3_2
7O7Y_Ba
7O7Y_B5
Conserved?
L:55 [LYS] 2:1191 [U] Ba:55 [LYS] B5:4086 [U] ✔
L:55 [LYS] 2:1192 [C] Ba:55 [LYS] B5:4087 [C] ✔
L:55 [LYS] 2:1193 [C] Ba:55 [LYS] B5:4088 [C] ✔
L:55 [LYS] 2:1227 [C] Ba:55 [LYS] B5:4111 [C] ✔
L:62 [HIS] 2:1216 [A] Ba:62 [HIS] B5:4100 [U] ✔
L:59 [ASP] 2:1216 [A] Ba:59 [ARG] B5:4100 [U] ✔
L:57 [GLY] 2:1226 [A] Ba:57 [GLY] B5:4110 [G] ✔
L:57 [GLY] 2:1227 [C] Ba:57 [GLY] B5:4111 [C] ✔
L:58 [MET] 2:1213 [A] Ba:58 [MET] B5:4097 [U] ✔
L:58 [MET] 2:1214 [U] Ba:58 [MET] B5:4098 [U] ✔
L:58 [MET] 2:1225 [U] Ba:58 [MET] B5:4109 [A] ✔
L:58 [MET] 2:1226 [A] Ba:58 [MET] B5:4110 [G] ✔
L:53 [PHE] 2:1191 [U] Ba:53 [PHE] B5:4086 [U] ✔
L:38 [MET] 2:1190 [A] Ba:38 [MET] B5:4085 [A] ✔
L:38 [MET] 2:1191 [U] Ba:38 [MET] B5:4086 [U] ✔
L:38 [MET] 2:1238 [A] Ba:38 [MET] B5:4122 [A] ✔
L:43 [ILE] 2:1156 [A] Ba:43 [ILE] B5:4050 [A] ✔
L:61 [TYR] 2:1216 [A] Ba:61 [TYR] B5:4100 [U] ✔
L:64 [LYS] 2:1217 [A] Ba:64 [LYS] B5:4101 [G] ✔
L:54 [GLY] 2:1191 [U] Ba:54 [GLY] B5:4086 [U] ✔
L:54 [GLY] 2:1192 [C] Ba:54 [GLY] B5:4087 [C] ✔
L:39 [HIS] 2:1240 [A] Ba:39 [V5N] B5:4124 [A] ✔
L:56 [LEU] 2:1226 [A] Ba:56 [VAL] B5:4110 [G] ✔
L:56 [LEU] 2:1227 [C] Ba:56 [VAL] B5:4111 [C] ✔
L:60 [HIS] 2:1216 [A] Ba:60 [HIS] B5:4100 [U] ✔
L:42 [ARG] 2:1190 [A] Ba:42 [ARG] B5:4085 [A] ✔
L:42 [ARG] 2:1238 [A] Ba:42 [ARG] B5:4122 [A] ✔
L:42 [ARG] 2:1239 [G] Ba:42 [ARG] B5:4123 [G] ✔
L:58 [MET] 2:1216 [A] Ba:58 [MET] B5:4100 [U] ❌ 7O7Y_Ba_B5
L:59 [ASP] 2:1225 [U] Ba:59 [ARG] B5:4109 [A] ❌ 6AZ3_L_2
L:46 [ASP] 2:1158 [U] Ba:46 [ASP] B5:4052 [OMU] ❌ 6AZ3_L:46, 6AZ3_2:1158 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA 0.91 0.6 0.67 0.93 0.9 1.0 1.0 0.97 0.83 0.71 0.33


Other pairs involving 6AZ3_L_2 or 7O7Y_Ba_B5

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_L_0 7O7Y_Ba_B5 0.62 0.93 2.45 0.36 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 6AZ3_L_2 0.48 0.82 2.4 0.27 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 6AZ3_L_2 0.48 0.82 2.32 0.27 Ribosomal proteins L15p and L18e compare
1YHQ_L_0 7O7Y_Ba_B5 0.62 0.93 2.36 0.35 Ribosomal proteins L15p and L18e compare
4Y4O_1P_1A 6AZ3_L_2 0.29 0.83 5.19 0.0 Ribosomal proteins L15p and L18e compare
6AZ3_L_1 7O7Y_Ba_B5 0.86 0.92 0.75 0.6 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
6AZ3_L_2 7O7Y_Ba_B5 0.97 0.91 0.6 0.67 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
6AZ3_L_2 6S0Z_J_A 0.29 0.81 5.35 0.13 Ribosomal proteins L15p and L18e compare
6S0Z_J_A 7O7Y_Ba_B5 0.38 0.88 4.38 0.11 Ribosomal proteins L15p and L18e compare